Literature DB >> 26518167

Targeted multi-gene panel testing for the diagnosis of Bardet Biedl syndrome: Identification of nine novel mutations across BBS1, BBS2, BBS4, BBS7, BBS9, BBS10 genes.

Asli Ece Solmaz1, Huseyin Onay2, Tahir Atik3, Ayca Aykut2, Meltem Cerrah Gunes4, Ozge Ozalp Yuregir5, Veysel Nijat Bas6, Filiz Hazan7, Ozgur Kirbiyik8, Ferda Ozkinay9.   

Abstract

Bardet-Biedl Syndrome (BBS) is a rare, autosomal-recessive ciliopathy characterized by obesity, rod-cone dystrophy, postaxial polydactyly, renal abnormalities, genital abnormalities and learning difficulties. To date, mutations in 21 different genes have been described as being responsible for BBS. Recently sequential gene sequencing has been replaced by next generation sequencing (NGS) applications. In this study, 15 patients with clinically diagnosed BBS were investigated using a next generation sequencing panel which included 17 known BBS causing genes (BBS1, BBS2, ARL6, BBS4, BBS5, MKKS, BBS7, TTC8, BBS9, BBS10, TRIM32, BBS12, MKS1, NPHP6, WDPCP, SDCCAG8, NPHP1). A genetic diagnosis was achieved in 13 patients (86.6%) and involved 9 novel and 3 previously described pathogenic variants in 6 of 17 BBS causing genes. BBS10 and BBS1 were the most commonly involved genes with frequencies of 31% and 23% respectively. Three of the 13 patients had an affected sibling. All affected siblings were found to be homozygous for the mutation detected in the proband. No evidence of triallelic inheritance was detected. Although limited association between certain genes and phenotypic features has been observed in this study, it is considered that additional studies are needed to better characterize the genotype-phenotype correlation of BBS. Our results demonstrate that NGS panels are feasible and effective method for providing high diagnostic yields in the diseases caused by multiple genes such as BBS.
Copyright © 2015 Elsevier Masson SAS. All rights reserved.

Entities:  

Keywords:  Bardet-Biedl syndrome; Mutation; Next-generation sequencing; Phenotype–genotype correlation

Mesh:

Year:  2015        PMID: 26518167     DOI: 10.1016/j.ejmg.2015.10.011

Source DB:  PubMed          Journal:  Eur J Med Genet        ISSN: 1769-7212            Impact factor:   2.708


  15 in total

Review 1.  Bardet-Biedl Syndrome.

Authors:  Evgeny N Suspitsin; Evgeny N Imyanitov
Journal:  Mol Syndromol       Date:  2016-04-15

Review 2.  Paediatric genomics: diagnosing rare disease in children.

Authors:  Caroline F Wright; David R FitzPatrick; Helen V Firth
Journal:  Nat Rev Genet       Date:  2018-02-05       Impact factor: 53.242

3.  Australia and New Zealand renal gene panel testing in routine clinical practice of 542 families.

Authors:  Hope A Tanudisastro; Katherine Holman; Gladys Ho; Elizabeth Farnsworth; Katrina Fisk; Thet Gayagay; Emma Hackett; Gemma Jenkins; Rahul Krishnaraj; Tiffany Lai; Karen Wong; Chirag Patel; Amali Mallawaarachchi; Andrew J Mallett; Bruce Bennetts; Stephen I Alexander; Hugh J McCarthy
Journal:  NPJ Genom Med       Date:  2021-03-04       Impact factor: 8.617

4.  Accessory heterozygous mutations in cone photoreceptor CNGA3 exacerbate CNG channel-associated retinopathy.

Authors:  Markus Burkard; Susanne Kohl; Timm Krätzig; Naoyuki Tanimoto; Christina Brennenstuhl; Anne E Bausch; Katrin Junger; Peggy Reuter; Vithiyanjali Sothilingam; Susanne C Beck; Gesine Huber; Xi-Qin Ding; Anja K Mayer; Britta Baumann; Nicole Weisschuh; Ditta Zobor; Gesa-Astrid Hahn; Ulrich Kellner; Sascha Venturelli; Elvir Becirovic; Peter Charbel Issa; Robert K Koenekoop; Günther Rudolph; John Heckenlively; Paul Sieving; Richard G Weleber; Christian Hamel; Xiangang Zong; Martin Biel; Robert Lukowski; Matthias W Seeliger; Stylianos Michalakis; Bernd Wissinger; Peter Ruth
Journal:  J Clin Invest       Date:  2018-11-12       Impact factor: 19.456

5.  Network for Early Onset Cystic Kidney Diseases-A Comprehensive Multidisciplinary Approach to Hereditary Cystic Kidney Diseases in Childhood.

Authors:  Jens Christian König; Andrea Titieni; Martin Konrad
Journal:  Front Pediatr       Date:  2018-02-13       Impact factor: 3.418

6.  Novel splicing variant c. 208+2T>C in BBS5 segregates with Bardet-Biedl syndrome in an Iranian family by targeted exome sequencing.

Authors:  Saber Imani; Jingliang Cheng; Jiewen Fu; Abdolkarim Mobasher-Jannat; Chunli Wei; Saman Mohazzab-Torabi; Khosrow Jadidi; Mohammad Hossein Khosravi; Marzieh Dehghan Shasaltaneh; Lisha Yang; Md Asaduzzaman Khan; Junjiang Fu
Journal:  Biosci Rep       Date:  2019-03-28       Impact factor: 3.840

Review 7.  Uncovering Missing Heritability in Rare Diseases.

Authors:  Tatiana Maroilley; Maja Tarailo-Graovac
Journal:  Genes (Basel)       Date:  2019-04-04       Impact factor: 4.096

8.  Identification of Common and Subtype-Specific Mutated Sub-Pathways for a Cancer.

Authors:  Haidan Yan; Xusheng Deng; Haifeng Chen; Jun Cheng; Jun He; Qingzhou Guan; Meifeng Li; Jiajing Xie; Jie Xia; Yunyan Gu; Zheng Guo
Journal:  Front Genet       Date:  2019-11-28       Impact factor: 4.599

Review 9.  A novel GABRB3 variant in Dravet syndrome: Case report and literature review.

Authors:  Piero Pavone; Xena Giada Pappalardo; Simona D Marino; Laura Sciuto; Giovanni Corsello; Martino Ruggieri; Enrico Parano; Maria Piccione; Raffaele Falsaperla
Journal:  Mol Genet Genomic Med       Date:  2020-09-18       Impact factor: 2.183

10.  Bardet-Biedl syndrome-7 (BBS7) shows treatment potential and a cone-rod dystrophy phenotype that recapitulates the non-human primate model.

Authors:  Tomas S Aleman; Erin C O'Neil; Keli O'Connor; Yu You Jiang; Isabella A Aleman; Jean Bennett; Jessica I W Morgan; Brian W Toussaint
Journal:  Ophthalmic Genet       Date:  2021-03-17       Impact factor: 1.274

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