Literature DB >> 26516088

Reclassification of Serpens flexibilis Hespell 1977 as Pseudomonas flexibilis comb. nov., with Pseudomonas tuomuerensis Xin et al. 2009 as a later heterotypic synonym.

Su-Kyoung Shin1, Chung Yeon Hwang2, Yong-Joon Cho3, Hana Yi4.   

Abstract

Serpens flexibilis was proposed in 1977 and approved in 1980 without the 16S rRNA gene sequence information. The sequence of S. flexibilis became available in 2010, after the publication of Pseudomonas tuomuerensis in 2009. Our preliminary phylogenetic analyses indicated that these two strains share high sequence similarity and therefore showed strong potential to be united into a single species. To clarify the taxonomic status of the two species, a polyphasic taxonomy study was conducted including whole genome sequencing. The value of average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) between the genome sequences of S. flexibilis ATCC 29606(T) and P. tuomuerensis JCM 14085(T) were 98.1% and 89.0%, respectively. The phenotypic and chemotaxonomic properties including enzymatic activities, substrate utilization profiles, and fatty acids, supported that the two taxa have no pronounced difference and should thus constitute a single species. Therefore, we propose to transfer Serpens flexibilis Hespell 1977 to the genus Pseudomonas as Pseudomonas flexibilis comb. nov. (type strain=ATCC 29606(T)), with Pseudomonas tuomuerensis Xin et al. 2009 as a later heterotypic synonym of Pseudomonas flexibilis.
Copyright © 2015 Elsevier GmbH. All rights reserved.

Entities:  

Keywords:  Pseudomonas flexibilis; Pseudomonas tuomuerensis; Serpens flexibilis; reclassification; whole genome sequencing

Mesh:

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Year:  2015        PMID: 26516088     DOI: 10.1016/j.syapm.2015.09.007

Source DB:  PubMed          Journal:  Syst Appl Microbiol        ISSN: 0723-2020            Impact factor:   4.022


  2 in total

1.  The native microbiome of the nematode Caenorhabditis elegans: gateway to a new host-microbiome model.

Authors:  Philipp Dirksen; Sarah Arnaud Marsh; Ines Braker; Nele Heitland; Sophia Wagner; Rania Nakad; Sebastian Mader; Carola Petersen; Vienna Kowallik; Philip Rosenstiel; Marie-Anne Félix; Hinrich Schulenburg
Journal:  BMC Biol       Date:  2016-05-09       Impact factor: 7.431

2.  On monospecific genera in prokaryotic taxonomy.

Authors:  Guanghong Zuo; Bailin Hao
Journal:  Synth Syst Biotechnol       Date:  2017-09-02
  2 in total

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