Literature DB >> 26513550

Avoiding abundance bias in the functional annotation of post-translationally modified proteins.

Christian Schölz1, David Lyon2, Jan C Refsgaard2, Lars Juhl Jensen2, Chunaram Choudhary1, Brian T Weinert1.   

Abstract

Mesh：

Substances：

Year:  2015        PMID： 26513550     DOI： 10.1038/nmeth.3621

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


× No keyword cloud information.
  13 in total

1.  Widespread and enzyme-independent Nε-acetylation and Nε-succinylation of proteins in the chemical conditions of the mitochondrial matrix.

Authors:  Gregory R Wagner; R Mark Payne
Journal:  J Biol Chem       Date:  2013-08-13       Impact factor: 5.157

2.  Global quantification of mammalian gene expression control.

Authors:  Björn Schwanhäusser; Dorothea Busse; Na Li; Gunnar Dittmar; Johannes Schuchhardt; Jana Wolf; Wei Chen; Matthias Selbach
Journal:  Nature       Date:  2011-05-19       Impact factor: 49.962

3.  Nonenzymatic acetylation of histones with acetyl-CoA.

Authors:  W K Paik; D Pearson; H W Lee; S Kim
Journal:  Biochim Biophys Acta       Date:  1970-08-08

4.  Acetyl-phosphate is a critical determinant of lysine acetylation in E. coli.

Authors:  Brian T Weinert; Vytautas Iesmantavicius; Sebastian A Wagner; Christian Schölz; Bertil Gummesson; Petra Beli; Thomas Nyström; Chunaram Choudhary
Journal:  Mol Cell       Date:  2013-07-03       Impact factor: 17.970

5.  Lysine succinylation is a frequently occurring modification in prokaryotes and eukaryotes and extensively overlaps with acetylation.

Authors:  Brian T Weinert; Christian Schölz; Sebastian A Wagner; Vytautas Iesmantavicius; Dan Su; Jeremy A Daniel; Chunaram Choudhary
Journal:  Cell Rep       Date:  2013-08-15       Impact factor: 9.423

6.  Proteome-wide mapping of the Drosophila acetylome demonstrates a high degree of conservation of lysine acetylation.

Authors:  Brian T Weinert; Sebastian A Wagner; Heiko Horn; Peter Henriksen; Wenshe R Liu; Jesper V Olsen; Lars J Jensen; Chunaram Choudhary
Journal:  Sci Signal       Date:  2011-07-26       Impact factor: 8.192

7.  Regulation of cellular metabolism by protein lysine acetylation.

Authors:  Shimin Zhao; Wei Xu; Wenqing Jiang; Wei Yu; Yan Lin; Tengfei Zhang; Jun Yao; Li Zhou; Yaxue Zeng; Hong Li; Yixue Li; Jiong Shi; Wenlin An; Susan M Hancock; Fuchu He; Lunxiu Qin; Jason Chin; Pengyuan Yang; Xian Chen; Qunying Lei; Yue Xiong; Kun-Liang Guan
Journal:  Science       Date:  2010-02-19       Impact factor: 47.728

8.  Acetylation dynamics and stoichiometry in Saccharomyces cerevisiae.

Authors:  Brian T Weinert; Vytautas Iesmantavicius; Tarek Moustafa; Christian Schölz; Sebastian A Wagner; Christoph Magnes; Rudolf Zechner; Chunaram Choudhary
Journal:  Mol Syst Biol       Date:  2014-01-30       Impact factor: 11.429

9.  Protein acetylation affects acetate metabolism, motility and acid stress response in Escherichia coli.

Authors:  Sara Castaño-Cerezo; Vicente Bernal; Harm Post; Tobias Fuhrer; Salvatore Cappadona; Nerea C Sánchez-Díaz; Uwe Sauer; Albert J R Heck; A F Maarten Altelaar; Manuel Cánovas
Journal:  Mol Syst Biol       Date:  2014-11-27       Impact factor: 11.429

10.  Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.

Authors:  Peter Henriksen; Sebastian A Wagner; Brian T Weinert; Satyan Sharma; Giedre Bacinskaja; Michael Rehman; André H Juffer; Tobias C Walther; Michael Lisby; Chunaram Choudhary
Journal:  Mol Cell Proteomics       Date:  2012-08-02       Impact factor: 5.911
View more
  25 in total

1.  Systematic and Quantitative Assessment of Hydrogen Peroxide Reactivity With Cysteines Across Human Proteomes.

Authors:  Ling Fu; Keke Liu; Mingan Sun; Caiping Tian; Rui Sun; Carlos Morales Betanzos; Keri A Tallman; Ned A Porter; Yong Yang; Dianjing Guo; Daniel C Liebler; Jing Yang
Journal:  Mol Cell Proteomics       Date:  2017-08-21       Impact factor: 5.911

2.  Time-Resolved Analysis Reveals Rapid Dynamics and Broad Scope of the CBP/p300 Acetylome.

Authors:  Brian T Weinert; Takeo Narita; Shankha Satpathy; Balaji Srinivasan; Bogi K Hansen; Christian Schölz; William B Hamilton; Beth E Zucconi; Wesley W Wang; Wenshe R Liu; Joshua M Brickman; Edward A Kesicki; Albert Lai; Kenneth D Bromberg; Philip A Cole; Chunaram Choudhary
Journal:  Cell       Date:  2018-05-24       Impact factor: 41.582

3.  Accurate Quantification of Site-specific Acetylation Stoichiometry Reveals the Impact of Sirtuin Deacetylase CobB on the E. coli Acetylome.

Authors:  Brian Tate Weinert; Shankha Satpathy; Bogi Karbech Hansen; David Lyon; Lars Juhl Jensen; Chunaram Choudhary
Journal:  Mol Cell Proteomics       Date:  2017-03-02       Impact factor: 5.911

4.  Deep Succinylproteomics of Brain Tissues from Intracerebral Hemorrhage with Inhibition of Toll-Like Receptor 4 Signaling.

Authors:  Yan-Jing Liang; Yuan-Rui Yang; Chuan-Yuan Tao; Su-Hao Yang; Xin-Xiao Zhang; Jing Yuan; Yuan-Hong Deng; Zhan-Qiong Zhong; Shu-Guang Yu; Xiao-Yi Xiong
Journal:  Cell Mol Neurobiol       Date:  2021-08-30       Impact factor: 4.231

5.  Listeria monocytogenes utilizes the ClpP1/2 proteolytic machinery for fine-tuned substrate degradation at elevated temperatures.

Authors:  Dóra Balogh; Konstantin Eckel; Christian Fetzer; Stephan A Sieber
Journal:  RSC Chem Biol       Date:  2022-05-31

6.  Cell wall proteomic analysis of the cnidarian photosymbionts Breviolum minutum and Cladocopium goreaui.

Authors:  Giada Tortorelli; Clinton A Oakley; Simon K Davy; Madeleine J H van Oppen; Geoffrey I McFadden
Journal:  J Eukaryot Microbiol       Date:  2021-09-15       Impact factor: 3.880

7.  Landscape of the regulatory elements for lysine 2-hydroxyisobutyrylation pathway.

Authors:  He Huang; Zhouqing Luo; Shankang Qi; Jing Huang; Peng Xu; Xiuxuan Wang; Li Gao; Fangyi Li; Jian Wang; Wenhui Zhao; Wei Gu; Zhucheng Chen; Lunzhi Dai; Junbiao Dai; Yingming Zhao
Journal:  Cell Res       Date:  2017-12-01       Impact factor: 25.617

8.  Proteomic Studies of Primary Acute Myeloid Leukemia Cells Derived from Patients Before and during Disease-Stabilizing Treatment Based on All-Trans Retinoic Acid and Valproic Acid.

Authors:  Maria Hernandez-Valladares; Rebecca Wangen; Elise Aasebø; Håkon Reikvam; Frode S Berven; Frode Selheim; Øystein Bruserud
Journal:  Cancers (Basel)       Date:  2021-04-29       Impact factor: 6.639

Review 9.  The Mystery of Extramitochondrial Proteins Lysine Succinylation.

Authors:  Christos Chinopoulos
Journal:  Int J Mol Sci       Date:  2021-06-04       Impact factor: 5.923

10.  Proteomic Comparison of Bone Marrow Derived Osteoblasts and Mesenchymal Stem Cells.

Authors:  Elise Aasebø; Annette K Brenner; Maria Hernandez-Valladares; Even Birkeland; Frode S Berven; Frode Selheim; Øystein Bruserud
Journal:  Int J Mol Sci       Date:  2021-05-26       Impact factor: 5.923
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.