Literature DB >> 26511928

CRISPR/Cas9-mediated mutagenesis in the sea lamprey Petromyzon marinus: a powerful tool for understanding ancestral gene functions in vertebrates.

Tyler Square1, Marek Romášek1, David Jandzik2, Maria V Cattell3, Michael Klymkowsky4, Daniel M Medeiros5.   

Abstract

Lamprey is one of only two living jawless vertebrates, a group that includes the first vertebrates. Comparisons between lamprey and jawed vertebrates have yielded important insights into the origin and evolution of vertebrate physiology, morphology and development. Despite its key phylogenetic position, studies of lamprey have been limited by their complex life history, which makes traditional genetic approaches impossible. The CRISPR/Cas9 system is a bacterial defense mechanism that was recently adapted to achieve high-efficiency targeted mutagenesis in eukaryotes. Here we report CRISPR/Cas9-mediated disruption of the genes Tyrosinase and FGF8/17/18 in the sea lamprey Petromyzon marinus, and detail optimized parameters for producing mutant F0 embryos. Using phenotype and genotype analyses, we show that CRISPR/Cas9 is highly effective in the sea lamprey, with a majority of injected embryos developing into complete or partial mutants. The ability to create large numbers of mutant embryos without inbred lines opens exciting new possibilities for studying development in lamprey and other non-traditional model organisms with life histories that prohibit the generation of mutant lines.
© 2015. Published by The Company of Biologists Ltd.

Entities:  

Keywords:  CRISPR; Evolution; Lamprey; Vertebrate

Mesh:

Substances:

Year:  2015        PMID: 26511928      PMCID: PMC4712834          DOI: 10.1242/dev.125609

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  39 in total

1.  Evidence for the prepattern/cooption model of vertebrate jaw evolution.

Authors:  Robert Cerny; Maria Cattell; Tatjana Sauka-Spengler; Marianne Bronner-Fraser; Feiqiao Yu; Daniel Meulemans Medeiros
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-20       Impact factor: 11.205

2.  11-deoxycortisol is a corticosteroid hormone in the lamprey.

Authors:  David A Close; Sang-Seon Yun; Stephen D McCormick; Andrew J Wildbill; Weiming Li
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-19       Impact factor: 11.205

3.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

4.  Efficient RNA/Cas9-mediated genome editing in Xenopus tropicalis.

Authors:  Xiaogang Guo; Tiejun Zhang; Zheng Hu; Yanqi Zhang; Zhaoying Shi; Qinhu Wang; Yan Cui; Fengqin Wang; Hui Zhao; Yonglong Chen
Journal:  Development       Date:  2014-01-08       Impact factor: 6.868

5.  Culturing lamprey embryos.

Authors:  Natalya Nikitina; Marianne Bronner-Fraser; Tatjana Sauka-Spengler
Journal:  Cold Spring Harb Protoc       Date:  2009-01

6.  Regulation and function of FGF8 in patterning of midbrain and anterior hindbrain.

Authors:  I Mason; D Chambers; H Shamim; J Walshe; C Irving
Journal:  Biochem Cell Biol       Date:  2000       Impact factor: 3.626

7.  Shh and Fgf8 act synergistically to drive cartilage outgrowth during cranial development.

Authors:  Arhat Abzhanov; Clifford J Tabin
Journal:  Dev Biol       Date:  2004-09-01       Impact factor: 3.582

8.  Highly efficient targeted mutagenesis of Drosophila with the CRISPR/Cas9 system.

Authors:  Andrew R Bassett; Charlotte Tibbit; Chris P Ponting; Ji-Long Liu
Journal:  Cell Rep       Date:  2013-07-01       Impact factor: 9.423

9.  Plant genome editing made easy: targeted mutagenesis in model and crop plants using the CRISPR/Cas system.

Authors:  Khaoula Belhaj; Angela Chaparro-Garcia; Sophien Kamoun; Vladimir Nekrasov
Journal:  Plant Methods       Date:  2013-10-11       Impact factor: 4.993

10.  Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs.

Authors:  James A Gagnon; Eivind Valen; Summer B Thyme; Peng Huang; Laila Akhmetova; Laila Ahkmetova; Andrea Pauli; Tessa G Montague; Steven Zimmerman; Constance Richter; Alexander F Schier
Journal:  PLoS One       Date:  2014-05-29       Impact factor: 3.240

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  19 in total

1.  An atlas of anterior hox gene expression in the embryonic sea lamprey head: Hox-code evolution in vertebrates.

Authors:  Hugo J Parker; Marianne E Bronner; Robb Krumlauf
Journal:  Dev Biol       Date:  2019-05-06       Impact factor: 3.582

Review 2.  Programmed DNA Elimination in Vertebrates.

Authors:  Jeramiah J Smith; Vladimir A Timoshevskiy; Cody Saraceno
Journal:  Annu Rev Anim Biosci       Date:  2020-09-28       Impact factor: 8.923

3.  CRISPR/Cas9 mutagenesis reveals a role for ABCB1 in gut immune responses to Vibrio diazotrophicus in sea urchin larvae.

Authors:  Travis J Fleming; Catherine S Schrankel; Himanshu Vyas; Hannah D Rosenblatt; Amro Hamdoun
Journal:  J Exp Biol       Date:  2021-04-15       Impact factor: 3.312

4.  CORALINA: a universal method for the generation of gRNA libraries for CRISPR-based screening.

Authors:  Anna Köferle; Karolina Worf; Christopher Breunig; Valentin Baumann; Javier Herrero; Maximilian Wiesbeck; Lukas H Hutter; Magdalena Götz; Christiane Fuchs; Stephan Beck; Stefan H Stricker
Journal:  BMC Genomics       Date:  2016-11-14       Impact factor: 3.969

5.  Sequence-Based Mapping and Genome Editing Reveal Mutations in Stickleback Hps5 Cause Oculocutaneous Albinism and the casper Phenotype.

Authors:  James C Hart; Craig T Miller
Journal:  G3 (Bethesda)       Date:  2017-09-07       Impact factor: 3.154

6.  Use of physiological knowledge to control the invasive sea lamprey (Petromyzon marinus) in the Laurentian Great Lakes.

Authors:  Michael J Siefkes
Journal:  Conserv Physiol       Date:  2017-05-30       Impact factor: 3.079

7.  Genome and epigenome engineering CRISPR toolkit for in vivo modulation of cis-regulatory interactions and gene expression in the chicken embryo.

Authors:  Ruth M Williams; Upeka Senanayake; Mara Artibani; Gunes Taylor; Daniel Wells; Ahmed Ashour Ahmed; Tatjana Sauka-Spengler
Journal:  Development       Date:  2018-02-23       Impact factor: 6.868

8.  Lampreys as Diverse Model Organisms in the Genomics Era.

Authors:  David W McCauley; Margaret F Docker; Steve Whyard; Weiming Li
Journal:  Bioscience       Date:  2015-10-10       Impact factor: 8.589

9.  Highly conserved molecular pathways, including Wnt signaling, promote functional recovery from spinal cord injury in lampreys.

Authors:  Paige E Herman; Angelos Papatheodorou; Stephanie A Bryant; Courtney K M Waterbury; Joseph R Herdy; Anthony A Arcese; Joseph D Buxbaum; Jeramiah J Smith; Jennifer R Morgan; Ona Bloom
Journal:  Sci Rep       Date:  2018-01-15       Impact factor: 4.379

10.  Towards the genetic control of invasive species.

Authors:  Tim Harvey-Samuel; Thomas Ant; Luke Alphey
Journal:  Biol Invasions       Date:  2017-02-21       Impact factor: 3.133

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