| Literature DB >> 26497592 |
L Pleva1,2, P Kovarova3,4, L Faldynova5,6, P Plevova7,8, S Hilscherova9,10, J Zapletalova11, P Kusnierova12,13, P Kukla14.
Abstract
BACKGROUND: We sought to identify gene polymorphisms that confer susceptibility to in-stent restenosis after coronary artery bare-metal stenting in a Central European population.Entities:
Mesh:
Substances:
Year: 2015 PMID: 26497592 PMCID: PMC4619506 DOI: 10.1186/s12872-015-0128-8
Source DB: PubMed Journal: BMC Cardiovasc Disord ISSN: 1471-2261 Impact factor: 2.298
Selected single nucleotide polymorphisms
| Polymorphism | |||
|---|---|---|---|
| Gene | Coding DNA level | Protein level | NCBI database |
|
| c.1699G>A | p.Ala567Thr | rs1803274 |
|
| c.6637G>A | p.Asp2213Asn | rs529038 |
|
| c.-238C>T | rs1800849 | |
|
| c.599C>T | p.Pro200Leu | rs1050450 |
|
| c.117–5723G>A | rs17216473 | |
|
| c.526C>T | p.Arg176Cys | rs7412 |
|
| c.388 T>C | p.Cys130Arg | rs429358 |
|
| c.1296 T>G | p.Asp432Glu | rs7041 |
|
| c.1307C>A | p.Thr436Lys | rs4588 |
|
| c.2 T>C | p.Met1Thr | rs2228570 |
|
| c.300C>T | p.Asp100= | rs1799986 |
|
| c.81C>T | p.Cys27= | rs2228671 |
Clinical characteristics of all patients (including matched controls) and angiographic parameters of coronary artery lesions
| In-stent restenosis | Controls | p | |
|---|---|---|---|
| Age (years) | 67.0 (59.0–74.0) | 67.0 (62.0–71.0) | 0.984 |
| Male/Female | 101/59 | 101/59 | 1.000b |
| Diabetes mellitus (%) | 28.75 | 28.75 | 1.000b |
| BMI (kg/m2) | 28.4 (25.7–31.2) | 29.1 (25.9–32.0) | 0.368 |
| Creat (umol/L) | 97 (86–115) | 99 (87–116) | 0.517 |
| Chol (mmol/L) | 4.27 (3.73–4.94) | 4.50 (3.95–5.55) | 0.046 |
| TG (mmol/L) | 1.62 (1.12–2.18) | 1.58 (1.17–2.21) | 0.644 |
| LDL (mmol/L) | 2.66 (2.27–3.19) | 2.96 (2.45–3.67) | 0.003 |
| HDL (mmol/L) | 1.25 (1.02–1.51) | 1.21 (1.00–1.42) | 0.354 |
| hs-CRP (mg/L) | 1.71 (0.82–3.76) | 1.70 (0.85–3.88) | 0.978 |
| ACSy (stemi/nstemi) (%) | 62.78 | 72.50 | 0.056b |
| Multi vessel dissease (%) | 57.5 | 49.38 | 0.145b |
| B2/C lesions (%) | 68.11 | 68.48 | 0.940b |
| Stent diameter (mm) | 3.0 (2.0–4.5)a | 3.0 (2.0–4.0)a | 0.214 |
| Stent lenght (mm) | 19 (8–68)a | 19 (8–86)a | 0.680 |
Data are given as median (lower and higher quartiles) or amedian (minimim–maximum). Quantitative parameters are given in percents
p, significance of Mann–Whitney U test or bchi-square test
Distribution of polymorphism genotypes in groups with and without ISR, minor alele frequencies (MAF) and logistic regression analysis, separately for each parameter with adjustment for diabetes mellitus
| Gene, polymorphism | Distribution of polymorphism genotypes | MAF in general CZ population, ISR and non-ISR groups; statistics | Logistic regression analysis, compared to the wild type allele with adjustment for diabetes mellitus | ||||||
|---|---|---|---|---|---|---|---|---|---|
| ISR group | Non-ISR group | p | Czech GP | ISR vs. GP | Non-ISR vs GP | OR | 95 % CI for OR | p | |
| No of pts (%) | No of pts (%) | p | p | ||||||
|
| 0.016 | ||||||||
| No of pts (n) | 160 | 158 | |||||||
| GG | 102 (63.8 %) | 122 (77.2 %) | |||||||
| GA | 50 (31.2 %) | 35 (22.2 %) | 1.715 | 1.034 - 2.846 | 0.037 | ||||
| AA | 8 (5 %) | 1 (0.6 %) |
|
|
|
| |||
| GA + AA | 58 (36.2 %) | 36 (22.8 %) | 0.009 | 1.934 | 1.181 -3.166 | 0.009 | |||
| MAF | 0.21 | 0.12 | 0.007 | 0.18 | 0.280 | 0.367 | |||
|
| 0.280 | ||||||||
| No of pts (n) | 160 | 160 | |||||||
| GG | 75 (46.9 %) | 78 (48.8 %) | |||||||
| GA | 75 (46.9 %) | 65 (40.6 %) | 1.200 | 0.758 - 1.899 | 0.436 | ||||
| AA | 10 (6.2 %) | 17 (10.6 %) | 0.269 | 0.612 | 0.263 - 1.421 | 0.253 | |||
| GA + AA | 86 (53.8 %) | 82 (51.2 %) | 0.823 | 1.078 | 0.695 - 1.672 | 0.737 | |||
| MAF | 0.3 | 0.31 | 1 | 0.3 | 1 | 1 | |||
|
| 0.982 | ||||||||
| No of pts (n) | 149 | 160 | |||||||
| CC | 86 (57.8 %) | 90 (56.2 %) | |||||||
| CT | 51 (34.2 %) | 63 (39.4 %) | 0.847 | 0.527 - 1.361 | 0.492 | ||||
| TT | 12 (8.1 %) | 7 (4.8 %) | 0.323 | 1.792 | 0.670 - 4.793 | 0.245 | |||
| CT + TT | 63 (42.3 %) | 70 (43.8 %) | 0.795 | 0.939 | 0.597–1.477 | 0.785 | |||
| MAF | 0,25 | 0,24 | 1 | 0,28 | 1 | 0,696 | |||
|
| 0.981 | ||||||||
| No of pts (n) | 157 | 160 | |||||||
| CC | 72 (46 %) | 76 (47.5 %) | |||||||
| CT | 74 (47.1 %) | 71 (44.5 %) | 1.085 | 0.687 - 1.715 | 0.726 | ||||
| TT | 10 (6.4 %) | 13 (8.1 %) | 0.788 | 0.801 | 0.331 - 1.941 | 0.623 | |||
| CT + TT | 84 (53.5 %) | 84 (52.5 %) | 0.811 | 1.041 | 0.670 - 1.619 | 0.857 | |||
| MAF | 0.3 | 0.3 | 1 | 0.23 | 0.101 | 0.094 | |||
|
| 1.000 | ||||||||
| No of pts (n) | 149 | 160 | |||||||
| GG | 113 (75.8 %) | 120 (75 %) | |||||||
| GA | 36 (24.2 %) | 38 (23.8 %) | 1.007 | 0.597 - 1.699 | 0.980 | ||||
| AA | 0 | 2 (1.2 %) | 0.642 | - | - | 0.999 | |||
| GA + AA | 36 (24.2 %) | 40 (25 %) | 0.895 | 0.956 | 0.569 - 1.605 | 0.865 | |||
| MAF | 0.12 | 0.13 | 1 | 0.09 | 0.738 | 1 | |||
|
| 0.995 | ||||||||
| No of pts (n) | 154 | 160 | |||||||
| *2/*2 | 1 (0.6 %) | 0 | - | - | 1.000 | ||||
| 2.3 | 12 (7.8 %) | 15 (9.4 %) | 0.814 | 0.363 - 1.826 | 0.618 | ||||
| 2.4 | 2 (1.3 %) | 2 (1.2 %) | 1.019 | 0.141 - 7.369 | 0.985 | ||||
| *2/*2; *2/*3; *2/*4 | 15 (9.7 %) | 17 (10.6 %) | 0.975 | 0.899 | 0.427 - 1.896 | 0.781 | |||
| 3/3 (wild) | 106 (68.8 %) | 108 (67.5 %) | 0.952 | ||||||
| 3.4 | 31 (20.1 %) | 32 (20 %) | 0.987 | 0.563 - 1.732 | 0.964 | ||||
| 4.4 | 2 (1.3 %) | 3 (1.9 %) | 0.680 | 0.111 - 4.152 | 0.676 | ||||
| 3/4;4/4 | 33 (21.4 %) | 35 (21.9 %) | 0.960 | 0.556 - 1.658 | 0.885 | ||||
| MAF *2 | 0.05 | 0.05 | 1 | 0.08 | 0.343 | 0.383 | |||
| MAF *4 | 0.11 | 0.12 | 1 | 0.14 | 0.831 | 1 | |||
|
| 0.722 | ||||||||
| No of pts (n) | 154 | 160 | |||||||
| TT | 17 (11 %) | 19 (11.9 %) | |||||||
| TG | 83 (53.9 %) | 79 (49.4 %) | 1.176 | 0.570 - 2.424 | 0.661 | ||||
| GG | 54 (35.1 %) | 62 (38.8 %) | 0.741 | 0.974 | 0.460 - 2.060 | 0.945 | |||
| TG + GG | 137 (89 %) | 141 (88.1 %) | 0.861 | 1.086 | 0.542 - 2.178 | 0.815 | |||
| MAF | 0.38 | 0.37 | 1 | 0.43 | 0.374 | 1 | |||
|
| 0.803 | ||||||||
| No of pts (n) | 149 | 160 | |||||||
| CC | 73 (49 %) | 82 (51.2 %) | |||||||
| CA | 64 (43 %) | 68 (42.5 %) | 1.059 | 0.665 - 1.686 | 0.810 | ||||
| AA | 12 (8.1 %) | 10 (6.2 %) | 0.821 | 1.350 | 0.551 - 3.311 | 0.512 | |||
| CA + AA | 76 (51.0 %) | 78 (48.8 %) | 0.733 | 1.096 | 0.701–1.713 | 0.688 | |||
| MAF | 0.29 | 0.28 | 1 | 0.31 | 1 | 1 | |||
|
| 0.913 | ||||||||
| No of pts (n) | 149 | 160 | |||||||
| TT | 30 (20.1 %) | 32 (20 %) | |||||||
| TC | 70 (47 %) | 79 (49.4 %) | 0.945 | 0.552 - 1.544 | 0.760 | ||||
| CC | 49 (32.9 %) | 49 (30.6 %) | 0.9 | 1.065 | 0.169 - 3.577 | 0.747 | |||
| TC + CC | 119 (79.9 %) | 128 (80 %) | 1 | 0.991 | 0.553 - 1.498 | 0.711 | |||
| MAF | 0.43 | 0.45 | 1 | 0.43 | 1 | 1 | |||
|
| 0.913 | ||||||||
| No of pts (n) | 149 | 160 | |||||||
| CC | 109 (73.2 %) | 114 (71.2 %) | |||||||
| CT | 37 (24.8 %) | 42 (26.2 %) | 0.923 | 0.552 - 1.544 | 0.760 | ||||
| TT | 3 (2.0 %) | 4 (2.5 %) | 0.941 | 0.778 | 0.169 - 3.577 | 0.747 | |||
| CT + TT | 40 (26.8 %) | 46 (28.8 %) | 0.8 | 0.910 | 0.553 - 1.498 | 0.711 | |||
| MAF | 0.14 | 0.15 | 1 | 0.16 | 1 | 1 | |||
|
| 0.716 | ||||||||
| No of pts (n) | 149 | 160 | |||||||
| CC | 124 (83.2 %) | 130 (81.2 %) | |||||||
| CT | 22 (14.8 %) | 28 (17.5 %) | 0.824 | 0.447 - 1.516 | 0.533 | ||||
| TT | 3 (2 %) | 2 (1.2 %) | 0.679 | 1.579 | 0.259 - 9.617 | 0.620 | |||
| CT + TT | 25 (16.9 %) | 30 (18.8 %) | 0.659 | 0.874 | 0.487 - 1.569 | 0.651 | |||
| MAF | 0.09 | 0.1 | 1 | 0.1 | 1 | 1 | |||
p = chi-square test
GP general population, CZ Czech
athe confidence interval - for rs1803274 homozygotes AA vs. GG is too wide. Therefore the data were analyzed only in the setting of a dominant model