Literature DB >> 26496390

Capitalizing on opportunistic data for monitoring relative abundances of species.

Christophe Giraud1,2, Clément Calenge3, Camille Coron1, Romain Julliard4.   

Abstract

With the internet, a massive amount of information on species abundance can be collected by citizen science programs. However, these data are often difficult to use directly in statistical inference, as their collection is generally opportunistic, and the distribution of the sampling effort is often not known. In this article, we develop a general statistical framework to combine such "opportunistic data" with data collected using schemes characterized by a known sampling effort. Under some structural assumptions regarding the sampling effort and detectability, our approach makes it possible to estimate the relative abundance of several species in different sites. It can be implemented through a simple generalized linear model. We illustrate the framework with typical bird datasets from the Aquitaine region in south-western France. We show that, under some assumptions, our approach provides estimates that are more precise than the ones obtained from the dataset with a known sampling effort alone. When the opportunistic data are abundant, the gain in precision may be considerable, especially for rare species. We also show that estimates can be obtained even for species recorded only in the opportunistic scheme. Opportunistic data combined with a relatively small amount of data collected with a known effort may thus provide access to accurate and precise estimates of quantitative changes in relative abundance over space and/or time.
© 2015, The International Biometric Society.

Keywords:  Detection probability; Opportunistic data; Sampling effort; Species distribution map

Mesh:

Year:  2015        PMID: 26496390     DOI: 10.1111/biom.12431

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  5 in total

1.  Towards Ecological Management and Sustainable Urban Planning in Seoul, South Korea: Mapping Wild Pollinator Habitat Preferences and Corridors Using Citizen Science Data.

Authors:  Hortense Serret; Desiree Andersen; Nicolas Deguines; Céline Clauzel; Wan-Hyeok Park; Yikweon Jang
Journal:  Animals (Basel)       Date:  2022-06-06       Impact factor: 3.231

2.  Species distribution modeling based on the automated identification of citizen observations.

Authors:  Christophe Botella; Alexis Joly; Pierre Bonnet; Pascal Monestiez; François Munoz
Journal:  Appl Plant Sci       Date:  2018-03-14       Impact factor: 1.936

3.  Improving big citizen science data: Moving beyond haphazard sampling.

Authors:  Corey T Callaghan; Jodi J L Rowley; William K Cornwell; Alistair G B Poore; Richard E Major
Journal:  PLoS Biol       Date:  2019-06-27       Impact factor: 8.029

4.  Resolving misaligned spatial data with integrated species distribution models.

Authors:  Krishna Pacifici; Brian J Reich; David A W Miller; Brent S Pease
Journal:  Ecology       Date:  2019-05-13       Impact factor: 5.499

Review 5.  The role of passive surveillance and citizen science in plant health.

Authors:  Nathan Brown; Ana Pérez-Sierra; Peter Crow; Stephen Parnell
Journal:  CABI Agric Biosci       Date:  2020-10-30
  5 in total

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