Literature DB >> 26492083

Self-Assembling NanoLuc Luciferase Fragments as Probes for Protein Aggregation in Living Cells.

Jia Zhao1, Travis J Nelson1, Quyen Vu1, Tiffany Truong1, Cliff I Stains1.   

Abstract

Given the clear role of protein aggregation in human disease, there is a critical need for assays capable of quantifying protein aggregation in living systems. We hypothesized that the inherently low background and biocompatibility of luminescence signal readouts could provide a potential solution to this problem. Herein, we describe a set of self-assembling NanoLuc luciferase (Nluc) fragments that produce a tunable luminescence readout that is dependent upon the solubility of a target protein fused to the N-terminal Nluc fragment. To demonstrate this approach, we employed this assay in bacteria to assess mutations known to disrupt amyloid-beta (Aβ) aggregation as well as disease-relevant mutations associated with familial Alzheimer's diseases. The luminescence signal from these experiments correlates with the reported aggregation potential of these Aβ mutants and reinforces the increased aggregation potential of disease-relevant mutations in Aβ1-42. To further demonstrate the utility of this approach, we show that the effect of small molecule inhibitors on Aβ aggregation can be monitored using this system. In addition, we demonstrate that aggregation assays can be ported into mammalian cells. Taken together, these results indicate that this platform could be used to rapidly screen for mutations that influence protein aggregation as well as inhibitors of protein aggregation. This method offers a novel, genetically encodable luminescence readout of protein aggregation in living cells.

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Year:  2015        PMID: 26492083      PMCID: PMC5110118          DOI: 10.1021/acschembio.5b00758

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  44 in total

1.  Protein secondary structure prediction based on position-specific scoring matrices.

Authors:  D T Jones
Journal:  J Mol Biol       Date:  1999-09-17       Impact factor: 5.469

2.  Inhibition of beta-amyloid fibrillization by directed evolution of a beta-sheet presenting miniature protein.

Authors:  Thaddeus J Smith; Cliff I Stains; Scott C Meyer; Indraneel Ghosh
Journal:  J Am Chem Soc       Date:  2006-11-15       Impact factor: 15.419

Review 3.  Molecules that target beta-amyloid.

Authors:  Cliff I Stains; Kalyani Mondal; Indraneel Ghosh
Journal:  ChemMedChem       Date:  2007-12       Impact factor: 3.466

4.  The Tottori (D7N) and English (H6R) familial Alzheimer disease mutations accelerate Abeta fibril formation without increasing protofibril formation.

Authors:  Yukiko Hori; Tadafumi Hashimoto; Yosuke Wakutani; Katsuya Urakami; Kenji Nakashima; Margaret M Condron; Satoshi Tsubuki; Takaomi C Saido; David B Teplow; Takeshi Iwatsubo
Journal:  J Biol Chem       Date:  2006-12-14       Impact factor: 5.157

5.  Screening libraries to identify proteins with desired binding activities using a split-GFP reassembly assay.

Authors:  Meredith E Jackrel; Aitziber L Cortajarena; Tina Y Liu; Lynne Regan
Journal:  ACS Chem Biol       Date:  2010-06-18       Impact factor: 5.100

6.  A simple method for displaying the hydropathic character of a protein.

Authors:  J Kyte; R F Doolittle
Journal:  J Mol Biol       Date:  1982-05-05       Impact factor: 5.469

7.  Characterization of oligomer formation of amyloid-beta peptide using a split-luciferase complementation assay.

Authors:  Tadafumi Hashimoto; Kenneth W Adams; Zhanyun Fan; Pamela J McLean; Bradley T Hyman
Journal:  J Biol Chem       Date:  2011-06-07       Impact factor: 5.157

8.  DNA sequence-enabled reassembly of the green fluorescent protein.

Authors:  Cliff I Stains; Jason R Porter; Aik T Ooi; David J Segal; Indraneel Ghosh
Journal:  J Am Chem Soc       Date:  2005-08-10       Impact factor: 15.419

Review 9.  Visualization of molecular interactions using bimolecular fluorescence complementation analysis: characteristics of protein fragment complementation.

Authors:  Tom K Kerppola
Journal:  Chem Soc Rev       Date:  2009-09-04       Impact factor: 54.564

10.  Automated, high-throughput platform for protein solubility screening using a split-GFP system.

Authors:  Pawel Listwan; Thomas C Terwilliger; Geoffrey S Waldo
Journal:  J Struct Funct Genomics       Date:  2008-11-28
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  15 in total

1.  AKT1, LKB1, and YAP1 Revealed as MYC Interactors with NanoLuc-Based Protein-Fragment Complementation Assay.

Authors:  Xiulei Mo; Qi Qi; Andrei A Ivanov; Qiankun Niu; Yin Luo; Jonathan Havel; Russell Goetze; Sydney Bell; Carlos S Moreno; Lee A D Cooper; Margaret A Johns; Fadlo R Khuri; Yuhong Du; Haian Fu
Journal:  Mol Pharmacol       Date:  2017-01-13       Impact factor: 4.436

2.  AggFluor: Fluorogenic Toolbox Enables Direct Visualization of the Multi-Step Protein Aggregation Process in Live Cells.

Authors:  Charles H Wolstenholme; Hang Hu; Songtao Ye; Brian E Funk; Divya Jain; Chia-Heng Hsiung; Gang Ning; Yu Liu; Xiaosong Li; Xin Zhang
Journal:  J Am Chem Soc       Date:  2020-10-05       Impact factor: 15.419

3.  Quantifying Nucleation In Vivo Reveals the Physical Basis of Prion-like Phase Behavior.

Authors:  Tarique Khan; Tejbir S Kandola; Jianzheng Wu; Shriram Venkatesan; Ellen Ketter; Jeffrey J Lange; Alejandro Rodríguez Gama; Andrew Box; Jay R Unruh; Malcolm Cook; Randal Halfmann
Journal:  Mol Cell       Date:  2018-07-05       Impact factor: 17.970

Review 4.  Surveying the landscape of optogenetic methods for detection of protein-protein interactions.

Authors:  Matthew D Wiens; Robert E Campbell
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2018-01-15

Review 5.  NanoLuc: A Small Luciferase Is Brightening Up the Field of Bioluminescence.

Authors:  Christopher G England; Emily B Ehlerding; Weibo Cai
Journal:  Bioconjug Chem       Date:  2016-04-19       Impact factor: 4.774

Review 6.  Direct visualization and profiling of protein misfolding and aggregation in live cells.

Authors:  Sicheng Tang; Wenting Wang; Xin Zhang
Journal:  Curr Opin Chem Biol       Date:  2021-07-08       Impact factor: 8.972

7.  Fast and high resolution single-cell BRET imaging.

Authors:  Elise Goyet; Nathalie Bouquier; Vincent Ollendorff; Julie Perroy
Journal:  Sci Rep       Date:  2016-06-15       Impact factor: 4.379

8.  An ultrasensitive NanoLuc-based luminescence system for monitoring Plasmodium berghei throughout its life cycle.

Authors:  Mariana De Niz; Rebecca R Stanway; Rahel Wacker; Derya Keller; Volker T Heussler
Journal:  Malar J       Date:  2016-04-21       Impact factor: 2.979

9.  A replication-competent foot-and-mouth disease virus expressing a luciferase reporter.

Authors:  Fuquan Zhang; Eva Perez-Martin; Nick Juleff; Bryan Charleston; Julian Seago
Journal:  J Virol Methods       Date:  2017-05-19       Impact factor: 2.014

10.  Using nanoBRET and CRISPR/Cas9 to monitor proximity to a genome-edited protein in real-time.

Authors:  Carl W White; Hannah K Vanyai; Heng B See; Elizabeth K M Johnstone; Kevin D G Pfleger
Journal:  Sci Rep       Date:  2017-06-09       Impact factor: 4.379

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