Literature DB >> 26489740

High-order nonlinear excitations in the Joyeux-Buyukdagli model of DNA.

Ying-Bo Yao1, Xiao-Yun Wang2, Bing Tang3.   

Abstract

By means of the semidiscrete multiple-scale method, we study the existence and properties of high-order envelope solitons and discrete breathers in a homogeneous DNA chain model that is based on pairing enthalpies and site-dependent finite stacking. We obtain the analytical solutions for an envelope soliton, and find that at the Brillouin zone center, discrete breather solutions can appear below the bottom of the phonon band. The behavior of two solitons in collisions and the stability of discrete breathers are confirmed by numerical simulations of the exact equations of the system.

Keywords:  DNA models; Discrete breathers; Envelope solitons; High-order solution

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Year:  2015        PMID: 26489740      PMCID: PMC4788630          DOI: 10.1007/s10867-015-9402-3

Source DB:  PubMed          Journal:  J Biol Phys        ISSN: 0092-0606            Impact factor:   1.365


  18 in total

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Authors:  Sara Cuenda; Angel Sánchez
Journal:  Chaos       Date:  2006-06       Impact factor: 3.642

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Authors:  D L Hien; N T Nhan; V Thanh Ngo; N A Viet
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-08-21

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Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-03-10

8.  Feigenbaum cascade of discrete breathers in a model of DNA.

Authors:  P Maniadis; B S Alexandrov; A R Bishop; K Ø Rasmussen
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-01-11

9.  Wavelength-tunable picosecond soliton fiber laser with Topological Insulator: Bi2Se3 as a mode locker.

Authors:  Chujun Zhao; Yanhong Zou; Yu Chen; Zhiteng Wang; Shunbin Lu; Han Zhang; Shuangchun Wen; Dingyuan Tang
Journal:  Opt Express       Date:  2012-12-03       Impact factor: 3.894

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Authors:  Jonathan Bock; Yayoi Fukuyo; Sona Kang; M Lisa Phipps; Ludmil B Alexandrov; Kim Ø Rasmussen; Alan R Bishop; Evan D Rosen; Jennifer S Martinez; Hou-Tong Chen; George Rodriguez; Boian S Alexandrov; Anny Usheva
Journal:  PLoS One       Date:  2010-12-31       Impact factor: 3.240

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