Literature DB >> 26488648

Cytoskeletal Network Morphology Regulates Intracellular Transport Dynamics.

David Ando1, Nickolay Korabel2, Kerwyn Casey Huang3, Ajay Gopinathan4.   

Abstract

Intracellular transport is essential for maintaining proper cellular function in most eukaryotic cells, with perturbations in active transport resulting in several types of disease. Efficient delivery of critical cargos to specific locations is accomplished through a combination of passive diffusion and active transport by molecular motors that ballistically move along a network of cytoskeletal filaments. Although motor-based transport is known to be necessary to overcome cytoplasmic crowding and the limited range of diffusion within reasonable timescales, the topological features of the cytoskeletal network that regulate transport efficiency and robustness have not been established. Using a continuum diffusion model, we observed that the time required for cellular transport was minimized when the network was localized near the nucleus. In simulations that explicitly incorporated network spatial architectures, total filament mass was the primary driver of network transit times. However, filament traps that redirect cargo back to the nucleus caused large variations in network transport. Filament polarity was more important than filament orientation in reducing average transit times, and transport properties were optimized in networks with intermediate motor on and off rates. Our results provide important insights into the functional constraints on intracellular transport under which cells have evolved cytoskeletal structures, and have potential applications for enhancing reactions in biomimetic systems through rational transport network design.
Copyright © 2015 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Mesh:

Year:  2015        PMID: 26488648      PMCID: PMC4624159          DOI: 10.1016/j.bpj.2015.08.034

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  48 in total

1.  Models of motor-assisted transport of intracellular particles.

Authors:  D A Smith; R M Simmons
Journal:  Biophys J       Date:  2001-01       Impact factor: 4.033

2.  Switching between microtubule- and actin-based transport systems in melanophores is controlled by cAMP levels.

Authors:  Vladimir Rodionov; Julie Yi; Anna Kashina; Abiola Oladipo; Steven P Gross
Journal:  Curr Biol       Date:  2003-10-28       Impact factor: 10.834

3.  Active transport on disordered microtubule networks: the generalized random velocity model.

Authors:  Aviv Kahana; Gilad Kenan; Mario Feingold; Michael Elbaum; Rony Granek
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-11-13

4.  Cytoplasmic intermediate filaments mediate actin-driven positioning of the nucleus.

Authors:  Isabelle Dupin; Yasuhisa Sakamoto; Sandrine Etienne-Manneville
Journal:  J Cell Sci       Date:  2011-03-15       Impact factor: 5.285

Review 5.  Actin- and microtubule-dependent organelle motors: interrelationships between the two motility systems.

Authors:  G M Langford
Journal:  Curr Opin Cell Biol       Date:  1995-02       Impact factor: 8.382

6.  Active diffusion positions the nucleus in mouse oocytes.

Authors:  Maria Almonacid; Wylie W Ahmed; Matthias Bussonnier; Philippe Mailly; Timo Betz; Raphaël Voituriez; Nir S Gov; Marie-Hélène Verlhac
Journal:  Nat Cell Biol       Date:  2015-03-16       Impact factor: 28.824

7.  Sizing and phenotyping of cellular vesicles using Nanoparticle Tracking Analysis.

Authors:  Rebecca A Dragovic; Christopher Gardiner; Alexandra S Brooks; Dionne S Tannetta; David J P Ferguson; Patrick Hole; Bob Carr; Christopher W G Redman; Adrian L Harris; Peter J Dobson; Paul Harrison; Ian L Sargent
Journal:  Nanomedicine       Date:  2011-05-04       Impact factor: 5.307

8.  Microtubule dynamics in interphase cells.

Authors:  E Schulze; M Kirschner
Journal:  J Cell Biol       Date:  1986-03       Impact factor: 10.539

9.  Self-organization of an acentrosomal microtubule network at the basal cortex of polarized epithelial cells.

Authors:  Amy Reilein; Soichiro Yamada; W James Nelson
Journal:  J Cell Biol       Date:  2005-11-28       Impact factor: 10.539

10.  Polymerization of tubulin in vivo: direct evidence for assembly onto microtubule ends and from centrosomes.

Authors:  B J Soltys; G G Borisy
Journal:  J Cell Biol       Date:  1985-05       Impact factor: 10.539

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  15 in total

1.  Spatial Cytoskeleton Organization Supports Targeted Intracellular Transport.

Authors:  Anne E Hafner; Heiko Rieger
Journal:  Biophys J       Date:  2018-03-27       Impact factor: 4.033

2.  Molecular underpinnings of cytoskeletal cross-talk.

Authors:  Angela Oberhofer; Emanuel Reithmann; Peter Spieler; Willi L Stepp; Dennis Zimmermann; Bettina Schmid; Erwin Frey; Zeynep Ökten
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-10       Impact factor: 11.205

3.  Hitching a Ride: Mechanics of Transport Initiation through Linker-Mediated Hitchhiking.

Authors:  Saurabh S Mogre; Jenna R Christensen; Cassandra S Niman; Samara L Reck-Peterson; Elena F Koslover
Journal:  Biophys J       Date:  2020-01-29       Impact factor: 4.033

4.  Spatial pattern formation in microtubule post-translational modifications and the tight localization of motor-driven cargo.

Authors:  Abdon Iniguez; Jun Allard
Journal:  J Math Biol       Date:  2016-09-03       Impact factor: 2.259

5.  System-wide organization of actin cytoskeleton determines organelle transport in hypocotyl plant cells.

Authors:  David Breuer; Jacqueline Nowak; Alexander Ivakov; Marc Somssich; Staffan Persson; Zoran Nikoloski
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-27       Impact factor: 11.205

6.  Microtubules Regulate Localization and Availability of Insulin Granules in Pancreatic Beta Cells.

Authors:  Kai M Bracey; Kung-Hsien Ho; Dmitry Yampolsky; Guogiang Gu; Irina Kaverina; William R Holmes
Journal:  Biophys J       Date:  2019-10-31       Impact factor: 4.033

7.  Dynamic motions of molecular motors in the actin cytoskeleton.

Authors:  Wonyeong Jung; A Pasha Tabatabai; Jacob J Thomas; S M Ali Tabei; Michael P Murrell; Taeyoon Kim
Journal:  Cytoskeleton (Hoboken)       Date:  2019-12-09

8.  Modulation of nanoparticle uptake, intracellular distribution, and retention with docetaxel to enhance radiotherapy.

Authors:  Aaron Henry Bannister; Kyle Bromma; Wonmo Sung; Mesa Monica; Leah Cicon; Perry Howard; Robert L Chow; Jan Schuemann; Devika Basnagge Chithrani
Journal:  Br J Radiol       Date:  2019-12-12       Impact factor: 3.039

9.  Actin bundle architecture and mechanics regulate myosin II force generation.

Authors:  Kimberly L Weirich; Samantha Stam; Edwin Munro; Margaret L Gardel
Journal:  Biophys J       Date:  2021-03-31       Impact factor: 4.033

10.  Diffusive search and trajectories on tubular networks: a propagator approach.

Authors:  Zubenelgenubi C Scott; Aidan I Brown; Saurabh S Mogre; Laura M Westrate; Elena F Koslover
Journal:  Eur Phys J E Soft Matter       Date:  2021-06-18       Impact factor: 1.890

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