Literature DB >> 26488278

Physics of Intracellular Organization in Bacteria.

Ned S Wingreen1, Kerwyn Casey Huang.   

Abstract

With the realization that bacteria achieve exquisite levels of spatiotemporal organization has come the challenge of discovering the underlying mechanisms. In this review, we describe three classes of such mechanisms, each of which has physical origins: the use of landmarks, the creation of higher-order structures that enable geometric sensing, and the emergence of length scales from systems of chemical reactions coupled to diffusion. We then examine the diversity of geometric cues that exist even in cells with relatively simple geometries, and end by discussing both new technologies that could drive further discovery and the implications of our current knowledge for the behavior, fitness, and evolution of bacteria. The organizational strategies described here are employed in a wide variety of systems and in species across all kingdoms of life; in many ways they provide a general blueprint for organizing the building blocks of life.

Entities:  

Keywords:  curvature-mediated localization; emergent length scales; geometric cues; gradient formation; landmarks; reaction-diffusion systems

Mesh:

Substances:

Year:  2015        PMID: 26488278     DOI: 10.1146/annurev-micro-091014-104313

Source DB:  PubMed          Journal:  Annu Rev Microbiol        ISSN: 0066-4227            Impact factor:   15.500


  11 in total

1.  Physical model of protein cluster positioning in growing bacteria.

Authors:  Vaibhav Wasnik; Hui Wang; Ned S Wingreen; Ranjan Mukhopadhyay
Journal:  New J Phys       Date:  2017-10-11       Impact factor: 3.729

2.  DNA-relay mechanism is sufficient to explain ParA-dependent intracellular transport and patterning of single and multiple cargos.

Authors:  Ivan V Surovtsev; Manuel Campos; Christine Jacobs-Wagner
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-31       Impact factor: 11.205

3.  Transmembrane region of bacterial chemoreceptor is capable of promoting protein clustering.

Authors:  Abiola M Pollard; Victor Sourjik
Journal:  J Biol Chem       Date:  2017-12-19       Impact factor: 5.157

4.  Nucleoid and cytoplasmic localization of small RNAs in Escherichia coli.

Authors:  Huanjie Sheng; Weston T Stauffer; Razika Hussein; Chris Lin; Han N Lim
Journal:  Nucleic Acids Res       Date:  2017-03-17       Impact factor: 16.971

5.  The Slow Mobility of the ParA Partitioning Protein Underlies Its Steady-State Patterning in Caulobacter.

Authors:  Ivan V Surovtsev; Hoong Chuin Lim; Christine Jacobs-Wagner
Journal:  Biophys J       Date:  2016-06-21       Impact factor: 4.033

6.  The Enigmatic Genome of an Obligate Ancient Spiroplasma Symbiont in a Hadal Holothurian.

Authors:  Li-Sheng He; Pei-Wei Zhang; Jiao-Mei Huang; Fang-Chao Zhu; Antoine Danchin; Yong Wang
Journal:  Appl Environ Microbiol       Date:  2017-12-15       Impact factor: 4.792

Review 7.  A Skeptic's Guide to Bacterial Mechanosensing.

Authors:  Ravi Chawla; Rachit Gupta; Tanmay P Lele; Pushkar P Lele
Journal:  J Mol Biol       Date:  2019-10-17       Impact factor: 5.469

Review 8.  Myxococcus xanthus as a Model Organism for Peptidoglycan Assembly and Bacterial Morphogenesis.

Authors:  Huan Zhang; Srutha Venkatesan; Beiyan Nan
Journal:  Microorganisms       Date:  2021-04-24

9.  Protein polarization driven by nucleoid exclusion of DnaK(HSP70)-substrate complexes.

Authors:  Clémence Collet; Jenny-Lee Thomassin; Olivera Francetic; Pierre Genevaux; Guy Tran Van Nhieu
Journal:  Nat Commun       Date:  2018-05-23       Impact factor: 14.919

10.  Effects of spatial heterogeneity on bacterial genetic circuits.

Authors:  Carlos Barajas; Domitilla Del Vecchio
Journal:  PLoS Comput Biol       Date:  2020-09-14       Impact factor: 4.475

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