Literature DB >> 26487716

Defining the Apoptotic Trigger: THE INTERACTION OF CYTOCHROME c AND CARDIOLIPIN.

Evan S O'Brien1, Nathaniel V Nucci1, Brian Fuglestad1, Cecilia Tommos1, A Joshua Wand2.   

Abstract

The interaction between cytochrome c and the anionic lipid cardiolipin has been proposed as a primary event in the apoptotic signaling cascade. Numerous studies that have examined the interaction of cytochrome c with cardiolipin embedded in a variety of model phospholipid membranes have suggested that partial unfolding of the protein is a precursor to the apoptotic response. However, these studies lacked site resolution and used model systems with negligible or a positive membrane curvature, which is distinct from the large negative curvature of the invaginations of the inner mitochondrial membrane where cytochrome c resides. We have used reverse micelle encapsulation to mimic the potential effects of confinement on the interaction of cytochrome c with cardiolipin. Encapsulation of oxidized horse cytochrome c in 1-decanoyl-rac-glycerol/lauryldimethylamine-N-oxide/hexanol reverse micelles prepared in pentane yields NMR spectra essentially identical to the protein in free aqueous solution. The structure of encapsulated ferricytochrome c was determined to high precision (<r.m.s. deviation>bb ∼ 0.23 Å) using NMR-based methods and is closely similar to the cryogenic crystal structure (<r.m.s. deviation>bb ∼ 1.2 Å). Incorporation of cardiolipin into the reverse micelle surfactant shell causes localized chemical shift perturbations of the encapsulated protein, providing the first view of the cardiolipin/cytochrome c interaction interface at atomic resolution. Three distinct sites of interaction are detected: the so-called A- and L-sites, plus a previously undocumented interaction centered on residues Phe-36, Gly-37, Thr-58, Trp-59, and Lys-60. Importantly, in distinct contrast to earlier studies of this interaction, the protein is not significantly disturbed by the binding of cardiolipin in the context of the reverse micelle.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  apoptosis; cardiolipin; confined space; cytochrome c; lipid-protein interaction; nuclear magnetic resonance (NMR); protein folding; protein hydration; protein stability

Mesh:

Substances:

Year:  2015        PMID: 26487716      PMCID: PMC4692216          DOI: 10.1074/jbc.M115.689406

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  50 in total

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Authors:  David L Vaux
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3.  Conformational properties of cardiolipin-bound cytochrome c.

Authors:  Jonas Hanske; Jason R Toffey; Anna M Morenz; Amber J Bonilla; Katherine H Schiavoni; Ekaterina V Pletneva
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-21       Impact factor: 11.205

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5.  Reverse micelle encapsulation of membrane-anchored proteins for solution NMR studies.

Authors:  Kathleen G Valentine; Ronald W Peterson; Jamil S Saad; Michael F Summers; Xianzhong Xu; James B Ames; A Joshua Wand
Journal:  Structure       Date:  2010-01-13       Impact factor: 5.006

6.  Origin of the conformational heterogeneity of cardiolipin-bound cytochrome C.

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Journal:  J Am Chem Soc       Date:  2012-11-02       Impact factor: 15.419

Review 7.  Cytochrome c/cardiolipin relations in mitochondria: a kiss of death.

Authors:  Valerian E Kagan; Hülya A Bayir; Natalia A Belikova; Olexandr Kapralov; Yulia Y Tyurina; Vladimir A Tyurin; Jianfei Jiang; Detcho A Stoyanovsky; Peter Wipf; Patrick M Kochanek; Joel S Greenberger; Bruce Pitt; Anna A Shvedova; Grigory Borisenko
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10.  Site-resolved measurement of water-protein interactions by solution NMR.

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  17 in total

1.  Cytochrome c phosphorylation: Control of mitochondrial electron transport chain flux and apoptosis.

Authors:  Hasini A Kalpage; Junmei Wan; Paul T Morse; Matthew P Zurek; Alice A Turner; Antoine Khobeir; Nabil Yazdi; Lara Hakim; Jenney Liu; Asmita Vaishnav; Thomas H Sanderson; Maurice-Andre Recanati; Lawrence I Grossman; Icksoo Lee; Brian F P Edwards; Maik Hüttemann
Journal:  Int J Biochem Cell Biol       Date:  2020-02-02       Impact factor: 5.085

2.  Reverse Micelle Encapsulation of Proteins for NMR Spectroscopy.

Authors:  Brian Fuglestad; Bryan S Marques; Christine Jorge; Nicole E Kerstetter; Kathleen G Valentine; A Joshua Wand
Journal:  Methods Enzymol       Date:  2018-12-10       Impact factor: 1.600

Review 3.  Mitochondria Damage and Kidney Disease.

Authors:  Pu Duann; Pei-Hui Lin
Journal:  Adv Exp Med Biol       Date:  2017       Impact factor: 2.622

4.  Cytochrome c Can Form a Well-Defined Binding Pocket for Hydrocarbons.

Authors:  Levi J McClelland; Harmen B B Steele; Frank G Whitby; Tung-Chung Mou; David Holley; J B Alexander Ross; Stephen R Sprang; Bruce E Bowler
Journal:  J Am Chem Soc       Date:  2016-12-19       Impact factor: 15.419

5.  Surface-Binding to Cardiolipin Nanodomains Triggers Cytochrome c Pro-apoptotic Peroxidase Activity via Localized Dynamics.

Authors:  Mingyue Li; Abhishek Mandal; Vladimir A Tyurin; Maria DeLucia; Jinwoo Ahn; Valerian E Kagan; Patrick C A van der Wel
Journal:  Structure       Date:  2019-03-14       Impact factor: 5.006

6.  Site-Resolved and Quantitative Characterization of Very Weak Protein-Ligand Interactions.

Authors:  Brian Fuglestad; Nicole E Kerstetter; A Joshua Wand
Journal:  ACS Chem Biol       Date:  2019-07-01       Impact factor: 5.100

7.  The K79G Mutation Reshapes the Heme Crevice and Alters Redox Properties of Cytochrome c.

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8.  The key role played by charge in the interaction of cytochrome c with cardiolipin.

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Journal:  J Biol Inorg Chem       Date:  2016-11-09       Impact factor: 3.358

9.  Binding of S. cerevisiae iso-1 cytochrome c and its surface lysine-to-alanine variants to cardiolipin: charge effects and the role of the lipid to protein ratio.

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Journal:  J Biol Inorg Chem       Date:  2020-03-18       Impact factor: 3.358

10.  Activation of Cytochrome C Peroxidase Function Through Coordinated Foldon Loop Dynamics upon Interaction with Anionic Lipids.

Authors:  Mingyue Li; Wanyang Sun; Vladimir A Tyurin; Maria DeLucia; Jinwoo Ahn; Valerian E Kagan; Patrick C A van der Wel
Journal:  J Mol Biol       Date:  2021-05-24       Impact factor: 6.151

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