Literature DB >> 26485092

Genomewide Association Study of Tacrolimus Concentrations in African American Kidney Transplant Recipients Identifies Multiple CYP3A5 Alleles.

W S Oetting1, D P Schladt2, W Guan3, M B Miller1, R P Remmel1, C Dorr2, K Sanghavi1, R B Mannon4, B Herrera5, A J Matas6, D R Salomon7, P-Y Kwok5, B J Keating8, A K Israni2,9,10, P A Jacobson1.   

Abstract

We previously reported that tacrolimus (TAC) trough blood concentrations for African American (AA) kidney allograft recipients were lower than those observed in white patients. Subtherapeutic TAC troughs may be associated with acute rejection (AR) and AR-associated allograft failure. This variation in TAC troughs is due, in part, to differences in the frequency of the cytochrome P450 CYP3A5*3 allele (rs776746, expresses nonfunctional enzyme) between white and AA recipients; however, even after accounting for this variant, variability in AA-associated troughs is significant. We conducted a genomewide association study of TAC troughs in AA kidney allograft recipients to search for additional genetic variation. We identified two additional CYP3A5 variants in AA recipients independently associated with TAC troughs: CYP3A5*6 (rs10264272) and CYP3A5*7 (rs41303343). All three variants and clinical factors account for 53.9% of the observed variance in troughs, with 19.8% of the variance coming from demographic and clinical factors including recipient age, glomerular filtration rate, anticytomegalovirus drug use, simultaneous pancreas-kidney transplant and antibody induction. There was no evidence of common genetic variants in AA recipients significantly influencing TAC troughs aside from the CYP3A gene. These results reveal that additional and possibly rare functional variants exist that account for the additional variation. © Copyright 2015 The American Society of Transplantation and the American Society of Transplant Surgeons.

Entities:  

Keywords:  basic (laboratory) research/science; genetics; genomics; immunosuppressant; calcineurin inhibitor: tacrolimus; immunosuppression/immune modulation; microarray/gene array; molecular biology: DNA; molecular biology: single polynucleotide polymorphism

Mesh:

Substances:

Year:  2015        PMID: 26485092      PMCID: PMC4733408          DOI: 10.1111/ajt.13495

Source DB:  PubMed          Journal:  Am J Transplant        ISSN: 1600-6135            Impact factor:   8.086


  24 in total

1.  Kidney transplant recipients carrying the CYP3A4*22 allelic variant have reduced tacrolimus clearance and often reach supratherapeutic tacrolimus concentrations.

Authors:  N Pallet; A-S Jannot; M El Bahri; I Etienne; M Buchler; B H de Ligny; G Choukroun; C Colosio; A Thierry; C Vigneau; B Moulin; Y Le Meur; A-E Heng; J-F Subra; C Legendre; P Beaune; C Alberti; M A Loriot; E Thervet
Journal:  Am J Transplant       Date:  2015-01-14       Impact factor: 8.086

2.  The risk of acute rejection and the influence of induction agents in lower-risk African American kidney transplant recipients receiving modern immunosuppression.

Authors:  Jane Gralla; Charles N Le; James E Cooper; Alexander C Wiseman
Journal:  Clin Transplant       Date:  2014-01-30       Impact factor: 2.863

3.  CYP3A5 and CYP3A4, but not ABCB1 polymorphisms affect tacrolimus dose-adjusted trough concentrations in kidney transplant recipients.

Authors:  Mateusz Kurzawski; Justyna Dąbrowska; Krzysztof Dziewanowski; Leszek Domański; Magdalena Perużyńska; Marek Droździk
Journal:  Pharmacogenomics       Date:  2014-02       Impact factor: 2.533

4.  Which Genetic Determinants Should be Considered for Tacrolimus Dose Optimization in Kidney Transplantation? A Combined Analysis of Genes Affecting the CYP3A Locus.

Authors:  Henrike Bruckmueller; Anneke Nina Werk; Lutz Renders; Thorsten Feldkamp; Martin Tepel; Christoffer Borst; Amke Caliebe; Ulrich Kunzendorf; Ingolf Cascorbi
Journal:  Ther Drug Monit       Date:  2015-06       Impact factor: 3.681

5.  African American renal transplant recipients (RTR) require higher tacrolimus doses to achieve target levels compared to white RTR: does clotrimazole help?

Authors:  M R Laftavi; O Pankewycz; S Patel; N Nader; R Kohli; L Feng; M Said; M Dayton
Journal:  Transplant Proc       Date:  2013       Impact factor: 1.066

6.  African-American race modifies the influence of tacrolimus concentrations on acute rejection and toxicity in kidney transplant recipients.

Authors:  David J Taber; Mulugeta G Gebregziabher; Titte R Srinivas; Kenneth D Chavin; Prabhakar K Baliga; Leonard E Egede
Journal:  Pharmacotherapy       Date:  2015-05-23       Impact factor: 4.705

7.  Validation of tacrolimus equation to predict troughs using genetic and clinical factors.

Authors:  Chaitali Passey; Angela K Birnbaum; Richard C Brundage; David P Schladt; William S Oetting; Robert E Leduc; Ajay K Israni; Weihua Guan; Arthur J Matas; Pamala A Jacobson
Journal:  Pharmacogenomics       Date:  2012-07       Impact factor: 2.533

Review 8.  Effect of CYP3A5*3 on kidney transplant recipients treated with tacrolimus: a systematic review and meta-analysis of observational studies.

Authors:  L Rojas; I Neumann; M José Herrero; V Bosó; J Reig; J Luis Poveda; J Megías; S Bea; S F Aliño
Journal:  Pharmacogenomics J       Date:  2014-09-09       Impact factor: 3.550

9.  Lower calcineurin inhibitor doses in older compared to younger kidney transplant recipients yield similar troughs.

Authors:  P A Jacobson; D Schladt; W S Oetting; R Leduc; W Guan; A J Matas; A Israni
Journal:  Am J Transplant       Date:  2012-09-04       Impact factor: 8.086

10.  Long-term outcomes in African American kidney transplant recipients under contemporary immunosuppression: a four-yr analysis of the Mycophenolic acid Observational REnal transplant (MORE) study.

Authors:  Mohanram Narayanan; Oleh Pankewycz; Fuad Shihab; Anne Wiland; Kevin McCague; Laurence Chan
Journal:  Clin Transplant       Date:  2013-12-24       Impact factor: 2.863

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  41 in total

Review 1.  Clinical Evaluation of Modified Release and Immediate Release Tacrolimus Formulations.

Authors:  Simon Tremblay; Rita R Alloway
Journal:  AAPS J       Date:  2017-07-17       Impact factor: 4.009

2.  Genetic Variants Associated With Immunosuppressant Pharmacokinetics and Adverse Effects in the DeKAF Genomics Genome-wide Association Studies.

Authors:  William S Oetting; Baolin Wu; David P Schladt; Weihua Guan; Jessica van Setten; Brendan J Keating; David Iklé; Rory P Remmel; Casey R Dorr; Roslyn B Mannon; Arthur J Matas; Ajay K Israni; Pamala A Jacobson
Journal:  Transplantation       Date:  2019-06       Impact factor: 4.939

3.  Analysis of 75 Candidate SNPs Associated With Acute Rejection in Kidney Transplant Recipients: Validation of rs2910164 in MicroRNA MIR146A.

Authors:  William S Oetting; David P Schladt; Casey R Dorr; Baolin Wu; Weihua Guan; Rory P Remmel; David Iklé; Roslyn B Mannon; Arthur J Matas; Ajay K Israni; Pamala A Jacobson
Journal:  Transplantation       Date:  2019-08       Impact factor: 4.939

Review 4.  Transplant genetics and genomics.

Authors:  Joshua Y C Yang; Minnie M Sarwal
Journal:  Nat Rev Genet       Date:  2017-03-13       Impact factor: 53.242

5.  Joint testing of donor and recipient genetic matching scores and recipient genotype has robust power for finding genes associated with transplant outcomes.

Authors:  Victoria L Arthur; Weihua Guan; Bao-Li Loza; Brendan Keating; Jinbo Chen
Journal:  Genet Epidemiol       Date:  2020-08-11       Impact factor: 2.135

6.  Genome-wide association study identifies the common variants in CYP3A4 and CYP3A5 responsible for variation in tacrolimus trough concentration in Caucasian kidney transplant recipients.

Authors:  W S Oetting; B Wu; D P Schladt; W Guan; R P Remmel; R B Mannon; A J Matas; A K Israni; P A Jacobson
Journal:  Pharmacogenomics J       Date:  2017-11-21       Impact factor: 3.550

7.  Attempted validation of 44 reported SNPs associated with tacrolimus troughs in a cohort of kidney allograft recipients.

Authors:  William S Oetting; Baolin Wu; David P Schladt; Weihua Guan; Rory P Remmel; Casey Dorr; Roslyn B Mannon; Arthur J Matas; Ajay K Israni; Pamala A Jacobson
Journal:  Pharmacogenomics       Date:  2018-01-10       Impact factor: 2.533

Review 8.  Health Disparities in Kidney Transplantation for African Americans.

Authors:  Kimberly Harding; Tesfaye B Mersha; Phuong-Thu Pham; Amy D Waterman; Fern A Webb; Joseph A Vassalotti; Susanne B Nicholas
Journal:  Am J Nephrol       Date:  2017-08-05       Impact factor: 3.754

9.  Tacrolimus trough and dose intra-patient variability and CYP3A5 genotype: Effects on acute rejection and graft failure in European American and African American kidney transplant recipients.

Authors:  Stephan R Seibert; David P Schladt; Baolin Wu; Weihua Guan; Casey Dorr; Rory P Remmel; Arthur J Matas; Roslyn B Mannon; Ajay K Israni; William S Oetting; Pamala A Jacobson
Journal:  Clin Transplant       Date:  2018-10-31       Impact factor: 2.863

10.  Development and evaluation of a transfusion medicine genome wide genotyping array.

Authors:  Yuelong Guo; Michael P Busch; Mark Seielstad; Stacy Endres-Dighe; Connie M Westhoff; Brendan Keating; Carolyn Hoppe; Aarash Bordbar; Brian Custer; Adam S Butterworth; Tamir Kanias; Alan E Mast; Steve Kleinman; Yontao Lu; Grier P Page
Journal:  Transfusion       Date:  2018-11-20       Impact factor: 3.157

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