Literature DB >> 26483478

Genome sequence of the Asian Tiger mosquito, Aedes albopictus, reveals insights into its biology, genetics, and evolution.

Xiao-Guang Chen1, Xuanting Jiang2, Jinbao Gu3, Meng Xu2, Yang Wu3, Yuhua Deng3, Chi Zhang2, Mariangela Bonizzoni4, Wannes Dermauw5, John Vontas6, Peter Armbruster7, Xin Huang7, Yulan Yang2, Hao Zhang3, Weiming He2, Hongjuan Peng3, Yongfeng Liu2, Kun Wu3, Jiahua Chen2, Manolis Lirakis8, Pantelis Topalis9, Thomas Van Leeuwen10, Andrew Brantley Hall11, Xiaofang Jiang11, Chevon Thorpe12, Rachel Lockridge Mueller13, Cheng Sun13, Robert Michael Waterhouse14, Guiyun Yan15, Zhijian Jake Tu11, Xiaodong Fang16, Anthony A James17.   

Abstract

The Asian tiger mosquito, Aedes albopictus, is a highly successful invasive species that transmits a number of human viral diseases, including dengue and Chikungunya fevers. This species has a large genome with significant population-based size variation. The complete genome sequence was determined for the Foshan strain, an established laboratory colony derived from wild mosquitoes from southeastern China, a region within the historical range of the origin of the species. The genome comprises 1,967 Mb, the largest mosquito genome sequenced to date, and its size results principally from an abundance of repetitive DNA classes. In addition, expansions of the numbers of members in gene families involved in insecticide-resistance mechanisms, diapause, sex determination, immunity, and olfaction also contribute to the larger size. Portions of integrated flavivirus-like genomes support a shared evolutionary history of association of these viruses with their vector. The large genome repertory may contribute to the adaptability and success of Ae. albopictus as an invasive species.

Entities:  

Keywords:  diapause; flavivirus; insecticide resistance; mosquito genome; transposons

Mesh:

Year:  2015        PMID: 26483478      PMCID: PMC4640774          DOI: 10.1073/pnas.1516410112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  92 in total

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Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

Review 2.  Mosquito genomics: progress and challenges.

Authors:  David W Severson; Susanta K Behura
Journal:  Annu Rev Entomol       Date:  2011-09-19       Impact factor: 19.686

3.  One-pipeline approach achieving glycoprotein identification and obtaining intact glycopeptide information by tandem mass spectrometry.

Authors:  Yaohan Chen; Mingqi Liu; Guoquan Yan; Haojie Lu; Pengyuan Yang
Journal:  Mol Biosyst       Date:  2010-10-01

4.  SOAP2: an improved ultrafast tool for short read alignment.

Authors:  Ruiqiang Li; Chang Yu; Yingrui Li; Tak-Wah Lam; Siu-Ming Yiu; Karsten Kristiansen; Jun Wang
Journal:  Bioinformatics       Date:  2009-06-03       Impact factor: 6.937

5.  Simple cDNA normalization using kamchatka crab duplex-specific nuclease.

Authors:  Pavel A Zhulidov; Ekaterina A Bogdanova; Alex S Shcheglov; Laura L Vagner; George L Khaspekov; Valery B Kozhemyako; Mikhail V Matz; Ella Meleshkevitch; Leonid L Moroz; Sergey A Lukyanov; Dmitry A Shagin
Journal:  Nucleic Acids Res       Date:  2004-02-18       Impact factor: 16.971

6.  Transcriptomic and phylogenetic analysis of Culex pipiens quinquefasciatus for three detoxification gene families.

Authors:  Liangzhen Yan; Pengcheng Yang; Feng Jiang; Na Cui; Enbo Ma; Chuanling Qiao; Feng Cui
Journal:  BMC Genomics       Date:  2012-11-10       Impact factor: 3.969

7.  Automated generation of heuristics for biological sequence comparison.

Authors:  Guy St C Slater; Ewan Birney
Journal:  BMC Bioinformatics       Date:  2005-02-15       Impact factor: 3.169

8.  SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler.

Authors:  Ruibang Luo; Binghang Liu; Yinlong Xie; Zhenyu Li; Weihua Huang; Jianying Yuan; Guangzhu He; Yanxiang Chen; Qi Pan; Yunjie Liu; Jingbo Tang; Gengxiong Wu; Hao Zhang; Yujian Shi; Yong Liu; Chang Yu; Bo Wang; Yao Lu; Changlei Han; David W Cheung; Siu-Ming Yiu; Shaoliang Peng; Zhu Xiaoqian; Guangming Liu; Xiangke Liao; Yingrui Li; Huanming Yang; Jian Wang; Tak-Wah Lam; Jun Wang
Journal:  Gigascience       Date:  2012-12-27       Impact factor: 6.524

9.  Slow DNA loss in the gigantic genomes of salamanders.

Authors:  Cheng Sun; José R López Arriaza; Rachel Lockridge Mueller
Journal:  Genome Biol Evol       Date:  2012       Impact factor: 3.416

10.  FlyBase 102--advanced approaches to interrogating FlyBase.

Authors:  Susan E St Pierre; Laura Ponting; Raymund Stefancsik; Peter McQuilton
Journal:  Nucleic Acids Res       Date:  2013-11-13       Impact factor: 16.971

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  103 in total

1.  MicroRNAs are differentially abundant during Aedes albopictus diapause maintenance but not diapause induction.

Authors:  Z A Batz; A C Goff; P A Armbruster
Journal:  Insect Mol Biol       Date:  2017-08-04       Impact factor: 3.585

2.  Rapid Evolution of Ovarian-Biased Genes in the Yellow Fever Mosquito (Aedes aegypti).

Authors:  Carrie A Whittle; Cassandra G Extavour
Journal:  Genetics       Date:  2017-06-19       Impact factor: 4.562

3.  Quantitative Proteomic Analysis of Mosquito C6/36 Cells Reveals Host Proteins Involved in Zika Virus Infection.

Authors:  Qi-Lin Xin; Cheng-Lin Deng; Xi Chen; Jun Wang; Shao-Bo Wang; Wei Wang; Fei Deng; Bo Zhang; Gengfu Xiao; Lei-Ke Zhang
Journal:  J Virol       Date:  2017-05-26       Impact factor: 5.103

Review 4.  Photoperiodic Diapause and the Establishment of Aedes albopictus (Diptera: Culicidae) in North America.

Authors:  Peter A Armbruster
Journal:  J Med Entomol       Date:  2016-06-28       Impact factor: 2.278

Review 5.  Vector biology meets disease control: using basic research to fight vector-borne diseases.

Authors:  W Robert Shaw; Flaminia Catteruccia
Journal:  Nat Microbiol       Date:  2018-08-27       Impact factor: 17.745

6.  The Diversity, Structure, and Function of Heritable Adaptive Immunity Sequences in the Aedes aegypti Genome.

Authors:  Zachary J Whitfield; Patrick T Dolan; Mark Kunitomi; Michel Tassetto; Matthew G Seetin; Steve Oh; Cheryl Heiner; Ellen Paxinos; Raul Andino
Journal:  Curr Biol       Date:  2017-11-09       Impact factor: 10.834

7.  Proteins, Transcripts, and Genetic Architecture of Seminal Fluid and Sperm in the Mosquito Aedes aegypti.

Authors:  Ethan C Degner; Yasir H Ahmed-Braimah; Kirill Borziak; Mariana F Wolfner; Laura C Harrington; Steve Dorus
Journal:  Mol Cell Proteomics       Date:  2018-12-14       Impact factor: 5.911

Review 8.  Control of Mosquito-Borne Infectious Diseases: Sex and Gene Drive.

Authors:  Zach N Adelman; Zhijian Tu
Journal:  Trends Parasitol       Date:  2016-02-17

9.  Infection of Aedes albopictus Mosquito C6/36 Cells with the wMelpop Strain of Wolbachia Modulates Dengue Virus-Induced Host Cellular Transcripts and Induces Critical Sequence Alterations in the Dengue Viral Genome.

Authors:  Tadahisa Teramoto; Xin Huang; Peter A Armbruster; Radhakrishnan Padmanabhan
Journal:  J Virol       Date:  2019-07-17       Impact factor: 5.103

10.  Proteomic analysis of a mosquito host cell response to persistent Wolbachia infection.

Authors:  Gerald Baldridge; LeeAnn Higgins; Bruce Witthuhn; Todd Markowski; Abigail Baldridge; Anibal Armien; Ann Fallon
Journal:  Res Microbiol       Date:  2017-04-21       Impact factor: 3.992

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