Literature DB >> 26483184

Neuropeptidomics Mass Spectrometry Reveals Signaling Networks Generated by Distinct Protease Pathways in Human Systems.

Vivian Hook1,2, Nuno Bandeira3,4.   

Abstract

Neuropeptides regulate intercellular signaling as neurotransmitters of the central and peripheral nervous systems, and as peptide hormones in the endocrine system. Diverse neuropeptides of distinct primary sequences of various lengths, often with post-translational modifications, coordinate and integrate regulation of physiological functions. Mass spectrometry-based analysis of the diverse neuropeptide structures in neuropeptidomics research is necessary to define the full complement of neuropeptide signaling molecules. Human neuropeptidomics has notable importance in defining normal and dysfunctional neuropeptide signaling in human health and disease. Neuropeptidomics has great potential for expansion in translational research opportunities for defining neuropeptide mechanisms of human diseases, providing novel neuropeptide drug targets for drug discovery, and monitoring neuropeptides as biomarkers of drug responses. In consideration of the high impact of human neuropeptidomics for health, an observed gap in this discipline is the few published articles in human neuropeptidomics compared with, for example, human proteomics and related mass spectrometry disciplines. Focus on human neuropeptidomics will advance new knowledge of the complex neuropeptide signaling networks participating in the fine control of neuroendocrine systems. This commentary review article discusses several human neuropeptidomics accomplishments that illustrate the rapidly expanding diversity of neuropeptides generated by protease processing of pro-neuropeptide precursors occurring within the secretory vesicle proteome. Of particular interest is the finding that human-specific cathepsin V participates in producing enkephalin and likely other neuropeptides, indicating unique proteolytic mechanisms for generating human neuropeptides. The field of human neuropeptidomics has great promise to solve new mechanisms in disease conditions, leading to new drug targets and therapeutic agents for human diseases. Graphical Abstract ᅟ.

Entities:  

Keywords:  Bioinformatics; Biomarker; Cathepsin L; Cathepsin V; Drug response; Human signaling networks; Intercellular signaling; Neuropeptidomics; Neurotransmitters; Peptide hormones; Proprotein convertase; Protease cleavage sites; Proteases; Proteomics; Secretory vesicles

Mesh:

Substances:

Year:  2015        PMID: 26483184      PMCID: PMC4749436          DOI: 10.1007/s13361-015-1251-6

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  33 in total

1.  Immunoassay of endogenous plasma insulin in man.

Authors:  R S YALOW; S A BERSON
Journal:  J Clin Invest       Date:  1960-07       Impact factor: 14.808

2.  Peptide identification from mixture tandem mass spectra.

Authors:  Jian Wang; Josué Pérez-Santiago; Jonathan E Katz; Parag Mallick; Nuno Bandeira
Journal:  Mol Cell Proteomics       Date:  2010-03-27       Impact factor: 5.911

3.  Integration of biological networks and gene expression data using Cytoscape.

Authors:  Melissa S Cline; Michael Smoot; Ethan Cerami; Allan Kuchinsky; Nerius Landys; Chris Workman; Rowan Christmas; Iliana Avila-Campilo; Michael Creech; Benjamin Gross; Kristina Hanspers; Ruth Isserlin; Ryan Kelley; Sarah Killcoyne; Samad Lotia; Steven Maere; John Morris; Keiichiro Ono; Vuk Pavlovic; Alexander R Pico; Aditya Vailaya; Peng-Liang Wang; Annette Adler; Bruce R Conklin; Leroy Hood; Martin Kuiper; Chris Sander; Ilya Schmulevich; Benno Schwikowski; Guy J Warner; Trey Ideker; Gary D Bader
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

Review 4.  Neuropeptide hormones as neurotrophic factors.

Authors:  F L Strand; K J Rose; L A Zuccarelli; J Kume; S E Alves; F J Antonawich; L Y Garrett
Journal:  Physiol Rev       Date:  1991-10       Impact factor: 37.312

Review 5.  Proteases for processing proneuropeptides into peptide neurotransmitters and hormones.

Authors:  Vivian Hook; Lydiane Funkelstein; Douglas Lu; Steven Bark; Jill Wegrzyn; Shin-Rong Hwang
Journal:  Annu Rev Pharmacol Toxicol       Date:  2008       Impact factor: 13.820

Review 6.  Neuropeptides from concept to online database www.neuropeptides.nl.

Authors:  J Peter H Burbach
Journal:  Eur J Pharmacol       Date:  2009-10-27       Impact factor: 4.432

Review 7.  A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics.

Authors:  Alexey I Nesvizhskii
Journal:  J Proteomics       Date:  2010-09-08       Impact factor: 4.044

8.  [Molecular structure of the hypothalamic hypophysiotropic TRF factor of ovine origin: mass spectrometry demonstration of the PCA-His-Pro-NH2 sequence].

Authors:  R Burgus; T F Dunn; D Desiderio; R Guillemin
Journal:  C R Acad Hebd Seances Acad Sci D       Date:  1969-11-12

9.  Cathepsin L in secretory vesicles functions as a prohormone-processing enzyme for production of the enkephalin peptide neurotransmitter.

Authors:  Sukkid Yasothornsrikul; Doron Greenbaum; Katalin F Medzihradszky; Thomas Toneff; Richard Bundey; Ruthellen Miller; Birgit Schilling; Ivonne Petermann; Jessica Dehnert; Anna Logvinova; Paul Goldsmith; John M Neveu; William S Lane; Bradford Gibson; Thomas Reinheckel; Christoph Peters; Matthew Bogyo; Vivian Hook
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-17       Impact factor: 11.205

Review 10.  The proprotein convertases.

Authors:  D F Steiner
Journal:  Curr Opin Chem Biol       Date:  1998-02       Impact factor: 8.822

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  13 in total

1.  Multifaceted Mass Spectrometric Investigation of Neuropeptide Changes in Atlantic Blue Crab, Callinectes sapidus, in Response to Low pH Stress.

Authors:  Yang Liu; Amanda R Buchberger; Kellen DeLaney; Zihui Li; Lingjun Li
Journal:  J Proteome Res       Date:  2019-06-10       Impact factor: 4.466

2.  A Multifaceted Mass Spectrometric Method to Probe Feeding Related Neuropeptide Changes in Callinectes sapidus and Carcinus maenas.

Authors:  Yuzhuo Zhang; Kellen DeLaney; Limei Hui; Junhua Wang; Robert M Sturm; Lingjun Li
Journal:  J Am Soc Mass Spectrom       Date:  2018-02-12       Impact factor: 3.109

3.  Capillary electrophoresis coupled to MALDI mass spectrometry imaging with large volume sample stacking injection for improved coverage of C. borealis neuropeptidome.

Authors:  Kellen DeLaney; Lingjun Li
Journal:  Analyst       Date:  2019-12-16       Impact factor: 4.616

Review 4.  Diversity of Neuropeptide Cell-Cell Signaling Molecules Generated by Proteolytic Processing Revealed by Neuropeptidomics Mass Spectrometry.

Authors:  Vivian Hook; Christopher B Lietz; Sonia Podvin; Tomas Cajka; Oliver Fiehn
Journal:  J Am Soc Mass Spectrom       Date:  2018-04-17       Impact factor: 3.109

5.  Improved identification and quantitation of mature endogenous peptides in the rodent hypothalamus using a rapid conductive sample heating system.

Authors:  Ning Yang; Krishna D B Anapindi; Elena V Romanova; Stanislav S Rubakhin; Jonathan V Sweedler
Journal:  Analyst       Date:  2017-11-20       Impact factor: 4.616

Review 6.  Mass Spectrometry Approaches Empowering Neuropeptide Discovery and Therapeutics.

Authors:  Krishna D B Anapindi; Elena V Romanova; James W Checco; Jonathan V Sweedler
Journal:  Pharmacol Rev       Date:  2022-07       Impact factor: 18.923

7.  Dysregulation of Neuropeptide and Tau Peptide Signatures in Human Alzheimer's Disease Brain.

Authors:  Sonia Podvin; Zhenze Jiang; Ben Boyarko; Leigh-Ana Rossitto; Anthony O'Donoghue; Robert A Rissman; Vivian Hook
Journal:  ACS Chem Neurosci       Date:  2022-06-27       Impact factor: 5.780

8.  Phosphopeptidomics Reveals Differential Phosphorylation States and Novel SxE Phosphosite Motifs of Neuropeptides in Dense Core Secretory Vesicles.

Authors:  Christopher B Lietz; Thomas Toneff; Charles Mosier; Sonia Podvin; Anthony J O'Donoghue; Vivian Hook
Journal:  J Am Soc Mass Spectrom       Date:  2018-03-19       Impact factor: 3.109

9.  Lysosomal Cathepsin Protease Gene Expression Profiles in the Human Brain During Normal Development.

Authors:  Amy Hsu; Sonia Podvin; Vivian Hook
Journal:  J Mol Neurosci       Date:  2018-07-14       Impact factor: 3.444

Review 10.  New techniques, applications and perspectives in neuropeptide research.

Authors:  Kellen DeLaney; Amanda R Buchberger; Louise Atkinson; Stefan Gründer; Angela Mousley; Lingjun Li
Journal:  J Exp Biol       Date:  2018-02-08       Impact factor: 3.312

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