| Literature DB >> 26473912 |
Evan D Rossignol1, Jie E Yang2, Esther Bullitt3.
Abstract
Replication of the poliovirus genome is localized to cytoplasmic replication factories that are fashioned out of a mixture of viral proteins, scavenged cellular components, and new components that are synthesized within the cell due to viral manipulation/up-regulation of protein and phospholipid synthesis. These membranous replication factories are quite complex, and include markers from multiple cytoplasmic cellular organelles. This review focuses on the role of electron microscopy in advancing our understanding of poliovirus RNA replication factories. Structural data from the literature provide the basis for interpreting a wide range of biochemical studies that have been published on virus-induced lipid biosynthesis. In combination, structural and biochemical experiments elucidate the dramatic membrane remodeling that is a hallmark of poliovirus infection. Temporal and spatial membrane modifications throughout the infection cycle are discussed. Early electron microscopy studies of morphological changes following viral infection are re-considered in light of more recent data on viral manipulation of lipid and protein biosynthesis. These data suggest the existence of distinct subcellular vesicle populations, each of which serves specialized roles in poliovirus replication processes.Entities:
Keywords: RNA replication; RNA virus; cell morphology; electron microscopy; membrane; membrane remodeling; poliovirus; replication organelle
Mesh:
Year: 2015 PMID: 26473912 PMCID: PMC4632382 DOI: 10.3390/v7102874
Source DB: PubMed Journal: Viruses ISSN: 1999-4915 Impact factor: 5.048
Poliovirus induced alterations in lipids and proteins.
| Lipids/Proteins | Changes upon Infection | Experimental Methods |
|---|---|---|
| Phosphatidylcholine | Synthesis increases a Fatty acid tail length increases (from C14/C16 to C18/C18) b | Radioactive pulse-chase [ Mass spectrometry [ |
| Sphingomyelin | Synthesis increases a | Radioactive pulse-chase [ |
| PI4P | Synthesis increases a,b | Radioactive pulse-chase [ Protein lipid overlay assay [ |
| Host long chain acyl-CoA synthetase | Activity increases a Long-chain acyl-CoA (phospholipid precursor) increases a | |
| PI4KIIIβ | Generates PI4P a,b | Fluorescence microscopy [ Protein lipid overlay assay [ |
| Poliovirus protein 2A | Activates free fatty acid import a,b | Individual protein expression in cells [ Measurement of uptake of fluorescent fatty acids [ |
| Poliovirus protein 3A | Recruits PI4KIIIβ to replication machinery a,b | Fluorescence Microscopy [ Immunoprecipitation [ |
| PI4P | Recruits OSBP to replication machinery a,b May increase membrane fluidity c,d | Immunoprecipitation [ Fluorescent Microscopy [ Fluorescence correlation spectroscopy [ Fluorescence recovery after photobleaching [ |
| Cholesterol | May counter over-fluidity caused by PI4P a,b | Fluorescence correlation spectroscopy [ Fluorescence recovery after photobleaching [ |
| OSBP | Mediates PI4P/cholesterol exchange on the membrane a,b | Chemical inhibitors: Itraconazole [ |
| Poliovirus protein 2BC | Activates PI4KIIIβ to generate more PI4P a,b Stimulates host OSBP activity a,b | Individual protein expression in cells [ Flow cytometry [ |
| Poliovirus protein 3A | Recruits clathrin-mediated cholesterol-rich endosomes to replication machinery a,b | Immunoprecipitation [ Fluorescence Microscopy [ |
PI4P: phosphatidylinositol-4-phosphate, acyl-CoA: Acetyl coenzyme A; OSBP: Oxysterol-binding protein.
Membrane remodeling induced by individual poliovirus proteins in the cell. Roles of individual poliovirus proteins in membrane remodeling.
| Poliovirus Protein | Membrane Structures Induced upon Protein Expression/Delivery in Cells |
|---|---|
| 2BC | Vesicles 50–350 nm in diameter [ Single-membrane empty vacuoles, located in peripheral regions of the cells [ |
| 2C | Vesicles 50–350 nm in diameter [ Clusters of large, clear single-membrane vesicles [ Membrane structures of Myelin-like swirls (sectioned cross-sectionally) [ Tubular sheets (visible when sectioned longitudinally) [ |
| 3AB | Upon direct delivery, dilates endoplasmic reticulum (ER) and Golgi lumen [ Enlarged and aggregated vacuoles [ Horseshoe structures [ |
| 3A | Swollen ER membrane [ Dilated single-membraned tubular-structures [ |
| 2BC and 3A | Small double-membrane clustered vesicles [ Large clear vacuoles [ |
| 2C and 3A | Swollen ER membranes enriched in cellular material with similar electron density to cytoplasm [ |
Figure 1Changes in cellular morphology after poliovirus infection. Schematized cells from electron micrographs in Schlegel et al., (A,D) [54], Dales et al., (B,E) [53], and Mattern and Daniels (C) [57]. Representative structures are marked: nuclear membrane (blue), mitochondria (red), vacuoles (orange). Lines denote cytoplasm, and dots represent “viroplasm”. Endoplasmic reticulum (yellow) becomes enlarged and sometimes called “nuclear extrusions” (as in panel C). Early in infection single membrane vesicles (purple) are visible, and later the appearance of U bodies/horseshoe-shaped vesicles (green) and double membrane vesicles (teal). In panel C, an image of a fractionated rosette (from Figure 3) is shown to scale, highlighting its similarity to structures seen within infected cells. Scale bar 1 μm.
Figure 3Morphology of rosette isolated from poliovirus-infected cells. (A) U body-like densities surround a dense central region of smaller vesicles. Cell fractionated material was prepared and imaged by Evan Rossignol using methods from Schlegel et al., 1996 [54]. Sample from 4 hpi is negatively stained and imaged by electron microscopy; (B) Cartoon highlights the horseshoe-shaped (U body-like) configurations of individual vesicles of the cluster. Magnification bar, 100 nm.
Figure 2Subcellular fractionation of functionally distinct vesicles associated with replication processes. In work by Caliguiri and Tamm, Dounce homogenates of HeLa cells were layered in a discontinuous sucrose gradient, centrifuged at 86,000 x g. Upon fractionation of the gradient, membrane bands with the indicated densities were collected. Properties of fractions 2, 3, and 5 are shown. Vesicle content was examined by electron microscopy [58]; RNA polymerase activity of the isolated fraction was measured by tritiated ATP incorporation; the abundance of RNA species (RI, RF, SS) was determined by gel electrophoresis; and viral titer was measured by plaque assay [58,66]. Note: data from Caliguiri and Tamm [58,66,67].
Figure 4Virus-induced membrane remodeling and expansion for poliovirus replication. (A) As early as 2.5 hpi, lipid buds off the ER [52], producing structures comprised of mostly virally induced lipids [11]; (B) New and pre-existing cellular vesicles are dynamically remodeled [55] and invaginated from tubules into vesicles, and U-bodies, using a unique lipid composition and specific virus proteins (listed in Table 1 and Table 2). Only a fraction of the membranous structures are involved in active RNA replication within lumenal spaces. Throughout infection (+) RNA exits the replication factory, destined for translation or packaging. For virus assembly, (+) RNA interacts with membrane-associated capsid protein pentamers on membranes that are distinct from replication factory membranes [70]; (C) Possible mechanism by which closed DMVs transitions to U-body with gated lumen. These structures are visible at timepoints beginning 4 hpi and are believed to continue active replication; (D) Autophagosome-like vesicle formation engulfs immature virus particles. These vesicles have twice the diameter of replication vesicles [71], and we posit that these membranes are distinct from those in RNA replication factories, which are still present in the cell; (E) Acidification of the autophagosome-like vesicles produces mature virus particles [72].