Literature DB >> 26469726

The complete mitochondrial genome of mungbean Vigna radiata var. radiata NM92 and a phylogenetic analysis of crops in angiosperms.

Ching-Ping Lin1,2, Hsiao-Feng Lo3, Chien-Yu Chen4,5, Long-Fang Oliver Chen1.   

Abstract

The entire mitogenome of the Vigna radiata var. radiata NM92 was identified as a circular molecule of 401 262 bp length (DDBJ accession number: AP014716). The contents of A, T, C, and G in the NM92 mitogenome were found to be 27.48%, 27.41%, 22.63%, and 22.48%, respectively. The NM92 mitogenome encoded 3 rRNAs, 16 tRNAs and 33 proteins. Eight protein-coding genes (nad1, nad2, nad4, nad5, nad7, rps3, and rps10) centain introns. Among them, three (nad1, nad2, and nad5) are trans-spliced genes. A phylogenetic tree was reconstructed using the 21 protein-coding genes of 16 crops. A species of gymnosperms, Cycas, was selected as the outgroup. This complete mitogenome sequence provides useful information to understand the cultivation of Vigna radiata and other crops.

Entities:  

Keywords:  Mungbean; Vigna radiata var. radiata; mitochondrial genome

Mesh:

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Year:  2015        PMID: 26469726     DOI: 10.3109/19401736.2015.1079879

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  3 in total

1.  Assembly and comparative analysis of the complete mitochondrial genome sequence of Sophora japonica 'JinhuaiJ2'.

Authors:  Yancai Shi; Yang Liu; Shouzhou Zhang; Rong Zou; Jianmin Tang; Weixue Mu; Yang Peng; Shanshan Dong
Journal:  PLoS One       Date:  2018-08-16       Impact factor: 3.240

2.  Assembly of the Mitochondrial Genome in the Campanulaceae Family Using Illumina Low-Coverage Sequencing.

Authors:  Hyun-Oh Lee; Ji-Weon Choi; Jeong-Ho Baek; Jae-Hyeon Oh; Sang-Choon Lee; Chang-Kug Kim
Journal:  Genes (Basel)       Date:  2018-07-30       Impact factor: 4.096

3.  The complete mitochondrial genome of wild mung bean (Vigna radiata var. sublobata TC1966).

Authors:  Ching-Ping Lin; Roland Schafleitner; Chien-Yu Chen; Hsiao-Feng Lo; Long-Fang Oliver Chen
Journal:  Mitochondrial DNA B Resour       Date:  2019-09-16       Impact factor: 0.658

  3 in total

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