Literature DB >> 26460016

Helical antimicrobial polypeptides with radial amphiphilicity.

Menghua Xiong1, Michelle W Lee2, Rachael A Mansbach3, Ziyuan Song1, Yan Bao4, Richard M Peek5, Catherine Yao1, Lin-Feng Chen4, Andrew L Ferguson6, Gerard C L Wong7, Jianjun Cheng8.   

Abstract

α-Helical antimicrobial peptides (AMPs) generally have facially amphiphilic structures that may lead to undesired peptide interactions with blood proteins and self-aggregation due to exposed hydrophobic surfaces. Here we report the design of a class of cationic, helical homo-polypeptide antimicrobials with a hydrophobic internal helical core and a charged exterior shell, possessing unprecedented radial amphiphilicity. The radially amphiphilic structure enables the polypeptide to bind effectively to the negatively charged bacterial surface and exhibit high antimicrobial activity against both gram-positive and gram-negative bacteria. Moreover, the shielding of the hydrophobic core by the charged exterior shell decreases nonspecific interactions with eukaryotic cells, as evidenced by low hemolytic activity, and protects the polypeptide backbone from proteolytic degradation. The radially amphiphilic polypeptides can also be used as effective adjuvants, allowing improved permeation of commercial antibiotics in bacteria and enhanced antimicrobial activity by one to two orders of magnitude. Designing AMPs bearing this unprecedented, unique radially amphiphilic structure represents an alternative direction of AMP development; radially amphiphilic polypeptides may become a general platform for developing AMPs to treat drug-resistant bacteria.

Entities:  

Keywords:  antimicrobial peptide; bacteria; polypeptides; radial amphiphilicity; α-helix

Mesh:

Substances:

Year:  2015        PMID: 26460016      PMCID: PMC4629321          DOI: 10.1073/pnas.1507893112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  57 in total

Review 1.  The structure, dynamics and orientation of antimicrobial peptides in membranes by multidimensional solid-state NMR spectroscopy.

Authors:  B Bechinger
Journal:  Biochim Biophys Acta       Date:  1999-12-15

Review 2.  Mechanism of the binding, insertion and destabilization of phospholipid bilayer membranes by alpha-helical antimicrobial and cell non-selective membrane-lytic peptides.

Authors:  Y Shai
Journal:  Biochim Biophys Acta       Date:  1999-12-15

3.  Enhancement of antimicrobial activity against pseudomonas aeruginosa by coadministration of G10KHc and tobramycin.

Authors:  Randal Eckert; Keith M Brady; E Peter Greenberg; Fengxia Qi; Daniel K Yarbrough; Jian He; Ian McHardy; Maxwell H Anderson; Wenyuan Shi
Journal:  Antimicrob Agents Chemother       Date:  2006-08-28       Impact factor: 5.191

4.  Interplay among folding, sequence, and lipophilicity in the antibacterial and hemolytic activities of alpha/beta-peptides.

Authors:  Margaret A Schmitt; Bernard Weisblum; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2007-01-17       Impact factor: 15.419

5.  Evaluation of strategies for improving proteolytic resistance of antimicrobial peptides by using variants of EFK17, an internal segment of LL-37.

Authors:  Adam A Strömstedt; Mukesh Pasupuleti; Artur Schmidtchen; Martin Malmsten
Journal:  Antimicrob Agents Chemother       Date:  2008-11-24       Impact factor: 5.191

6.  Synergistic co-delivery of membrane-disrupting polymers with commercial antibiotics against highly opportunistic bacteria.

Authors:  Victor Wee Lin Ng; Xiyu Ke; Ashlynn L Z Lee; James L Hedrick; Yi Yan Yang
Journal:  Adv Mater       Date:  2013-09-09       Impact factor: 30.849

7.  Machine learning of single molecule free energy surfaces and the impact of chemistry and environment upon structure and dynamics.

Authors:  Rachael A Mansbach; Andrew L Ferguson
Journal:  J Chem Phys       Date:  2015-03-14       Impact factor: 3.488

8.  Helicobacter pylori strain-specific genotypes and modulation of the gastric epithelial cell cycle.

Authors:  R M Peek; M J Blaser; D J Mays; M H Forsyth; T L Cover; S Y Song; U Krishna; J A Pietenpol
Journal:  Cancer Res       Date:  1999-12-15       Impact factor: 12.701

9.  Criterion for amino acid composition of defensins and antimicrobial peptides based on geometry of membrane destabilization.

Authors:  Nathan W Schmidt; Abhijit Mishra; Ghee Hwee Lai; Matthew Davis; Lori K Sanders; Dat Tran; Angie Garcia; Kenneth P Tai; Paul B McCray; André J Ouellette; Michael E Selsted; Gerard C L Wong
Journal:  J Am Chem Soc       Date:  2011-04-07       Impact factor: 15.419

10.  An electrochemical study into the interaction between complement-derived peptides and DOPC mono- and bilayers.

Authors:  Lovisa Ringstad; Elisabeth Protopapa; Britta Lindholm-Sethson; Artur Schmidtchen; Andrew Nelson; Martin Malmsten
Journal:  Langmuir       Date:  2007-12-05       Impact factor: 3.882

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  26 in total

1.  Selective killing of Helicobacter pylori with pH-responsive helix-coil conformation transitionable antimicrobial polypeptides.

Authors:  Menghua Xiong; Yan Bao; Xin Xu; Hua Wang; Zhiyuan Han; Zhiyu Wang; Yeqing Liu; Songyin Huang; Ziyuan Song; Jinjing Chen; Richard M Peek; Lichen Yin; Lin-Feng Chen; Jianjun Cheng
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-13       Impact factor: 11.205

Review 2.  What can machine learning do for antimicrobial peptides, and what can antimicrobial peptides do for machine learning?

Authors:  Ernest Y Lee; Michelle W Lee; Benjamin M Fulan; Andrew L Ferguson; Gerard C L Wong
Journal:  Interface Focus       Date:  2017-10-20       Impact factor: 3.906

3.  Antimicrobial Peptides Share a Common Interaction Driven by Membrane Line Tension Reduction.

Authors:  J Michael Henderson; Alan J Waring; Frances Separovic; Ka Yee C Lee
Journal:  Biophys J       Date:  2016-11-15       Impact factor: 4.033

Review 4.  Antimicrobial peptides: biochemical determinants of activity and biophysical techniques of elucidating their functionality.

Authors:  Nadin Shagaghi; Enzo A Palombo; Andrew H A Clayton; Mrinal Bhave
Journal:  World J Microbiol Biotechnol       Date:  2018-04-12       Impact factor: 3.312

5.  Direct Antimicrobial Activity of IFN-β.

Authors:  Amber Kaplan; Michelle W Lee; Andrea J Wolf; Jose J Limon; Courtney A Becker; Minna Ding; Ramachandran Murali; Ernest Y Lee; George Y Liu; Gerard C L Wong; David M Underhill
Journal:  J Immunol       Date:  2017-04-14       Impact factor: 5.422

Review 6.  Machine learning-enabled discovery and design of membrane-active peptides.

Authors:  Ernest Y Lee; Gerard C L Wong; Andrew L Ferguson
Journal:  Bioorg Med Chem       Date:  2017-07-08       Impact factor: 3.641

Review 7.  What Can Pleiotropic Proteins in Innate Immunity Teach Us about Bioconjugation and Molecular Design?

Authors:  Michelle W Lee; Ernest Y Lee; Gerard C L Wong
Journal:  Bioconjug Chem       Date:  2018-06-14       Impact factor: 4.774

8.  Chemokine CCL28 Is a Potent Therapeutic Agent for Oropharyngeal Candidiasis.

Authors:  Jie He; Monica A Thomas; Jaime de Anda; Michelle W Lee; Emma Van Why; Pippa Simpson; Gerard C L Wong; Mitchell H Grayson; Brian F Volkman; Anna R Huppler
Journal:  Antimicrob Agents Chemother       Date:  2020-07-22       Impact factor: 5.191

9.  How do cyclic antibiotics with activity against Gram-negative bacteria permeate membranes? A machine learning informed experimental study.

Authors:  Michelle W Lee; Jaime de Anda; Carsten Kroll; Christoph Bieniossek; Kenneth Bradley; Kurt E Amrein; Gerard C L Wong
Journal:  Biochim Biophys Acta Biomembr       Date:  2020-04-18       Impact factor: 3.747

Review 10.  Antimicrobial Polymeric Structures Assembled on Surfaces.

Authors:  Iulia Babutan; Alexandra-Delia Lucaci; Ioan Botiz
Journal:  Polymers (Basel)       Date:  2021-05-12       Impact factor: 4.329

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