Literature DB >> 26453310

The Organophosphate Degradation (opd) Island-borne Esterase-induced Metabolic Diversion in Escherichia coli and Its Influence on p-Nitrophenol Degradation.

Deviprasanna Chakka1, Ramurthy Gudla1, Ashok Kumar Madikonda1, Emmanuel Vijay Paul Pandeeti1, Sunil Parthasarathy1, Aparna Nandavaram1, Dayananda Siddavattam2.   

Abstract

In previous studies of the organophosphate degradation gene cluster, we showed that expression of an open reading frame (orf306) present within the cluster in Escherichia coli allowed growth on p-nitrophenol (PNP) as sole carbon source. We have now shown that expression of orf306 in E. coli causes a dramatic up-regulation in genes coding for alternative carbon catabolism. The propionate, glyoxylate, and methylcitrate cycle pathway-specific enzymes are up-regulated along with hca (phenylpropionate) and mhp (hydroxyphenylpropionate) degradation operons. These hca and mhp operons play a key role in degradation of PNP, enabling E. coli to grow using it as sole carbon source. Supporting growth experiments, PNP degradation products entered central metabolic pathways and were incorporated into the carbon backbone. The protein and RNA samples isolated from E. coli (pSDP10) cells grown in (14)C-labeled PNP indicated incorporation of (14)C carbon, suggesting Orf306-dependent assimilation of PNP in E. coli cells.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Escherichia coli (E. coli); biodegradation; gene expression; gene knock-out; metabolic regulation; microarray

Mesh:

Substances:

Year:  2015        PMID: 26453310      PMCID: PMC4705976          DOI: 10.1074/jbc.M115.661249

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  31 in total

1.  Transposon-like organization of the plasmid-borne organophosphate degradation (opd) gene cluster found in Flavobacterium sp.

Authors:  Dayananda Siddavattam; Syed Khajamohiddin; Bramanandam Manavathi; Suresh B Pakala; Mike Merrick
Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792

2.  Shared promiscuous activities and evolutionary features in various members of the amidohydrolase superfamily.

Authors:  Cintia Roodveldt; Dan S Tawfik
Journal:  Biochemistry       Date:  2005-09-27       Impact factor: 3.162

3.  The complete genome sequence of Escherichia coli K-12.

Authors:  F R Blattner; G Plunkett; C A Bloch; N T Perna; V Burland; M Riley; J Collado-Vides; J D Glasner; C K Rode; G F Mayhew; J Gregor; N W Davis; H A Kirkpatrick; M A Goeden; D J Rose; B Mau; Y Shao
Journal:  Science       Date:  1997-09-05       Impact factor: 47.728

Review 4.  Biodegradation of aromatic compounds by Escherichia coli.

Authors:  E Díaz; A Ferrández; M A Prieto; J L García
Journal:  Microbiol Mol Biol Rev       Date:  2001-12       Impact factor: 11.056

Review 5.  Microbial degradation of organophosphorus compounds.

Authors:  Brajesh K Singh; Allan Walker
Journal:  FEMS Microbiol Rev       Date:  2006-05       Impact factor: 16.408

6.  Benzoate-mediated changes on expression profile of soluble proteins in Serratia sp. DS001.

Authors:  E V P Pandeeti; M R Chinnaboina; D Siddavattam
Journal:  Lett Appl Microbiol       Date:  2009-03-09       Impact factor: 2.858

7.  Determination of flux through the branch point of two metabolic cycles. The tricarboxylic acid cycle and the glyoxylate shunt.

Authors:  K Walsh; D E Koshland
Journal:  J Biol Chem       Date:  1984-08-10       Impact factor: 5.157

8.  OxyR-dependent expression of a novel glutathione S-transferase (Abgst01) gene in Acinetobacter baumannii DS002 and its role in biotransformation of organophosphate insecticides.

Authors:  Toshisangba Longkumer; Sunil Parthasarathy; Sujana Ghanta Vemuri; Dayananda Siddavattam
Journal:  Microbiology       Date:  2013-10-17       Impact factor: 2.777

9.  3-Hydroxyphenylpropionate and phenylpropionate are synergistic activators of the MhpR transcriptional regulator from Escherichia coli.

Authors:  Isabel Manso; Begoña Torres; José Manuel Andreu; Margarita Menéndez; Germán Rivas; Carlos Alfonso; Eduardo Díaz; José Luis García; Beatriz Galán
Journal:  J Biol Chem       Date:  2009-06-11       Impact factor: 5.157

10.  The evolutionary origins of detoxifying enzymes: the mammalian serum paraoxonases (PONs) relate to bacterial homoserine lactonases.

Authors:  Hagit Bar-Rogovsky; Adrian Hugenmatter; Dan S Tawfik
Journal:  J Biol Chem       Date:  2013-06-20       Impact factor: 5.157

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  2 in total

1.  Novel mutation in Cul7 gene in a family diagnosed with 3M syndrome.

Authors:  Shagufta Shaikh; Suresh K G Shettigar; Santosh Kumar; Surita Kantharia; Jagannath Kurva; Susan Cherian
Journal:  J Genet       Date:  2019-03       Impact factor: 1.166

2.  Recent Advanced Technologies for the Characterization of Xenobiotic-Degrading Microorganisms and Microbial Communities.

Authors:  Sandhya Mishra; Ziqiu Lin; Shimei Pang; Wenping Zhang; Pankaj Bhatt; Shaohua Chen
Journal:  Front Bioeng Biotechnol       Date:  2021-02-10
  2 in total

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