| Literature DB >> 26445096 |
Myoung Woo Lee1, Somi Ryu1, Dae Seong Kim1, Ki Woong Sung1, Hong Hoe Koo2,3, Keon Hee Yoo4,5.
Abstract
Mesenchymal stem cells (MSCs) are of particular interest for the treatment of immune-related diseases because of their immunosuppressive capacities. However, few clinical trials of MSCs have yielded satisfactory results. A number of clinical trials using MSCs are currently in progress worldwide. Unfortunately, protocols and methods, including optimized culture conditions for the harvest of MSCs, have not been standardized. In this regard, complications in the ex vivo expansion of MSCs and MSC heterogeneity have been implicated in the failure of clinical trials. In this review, potential strategies to obtain MSCs with improved immunosuppressive properties and the potential roles of specific immunomodulatory genes, which are differentially upregulated in certain culture conditions, will be discussed.Entities:
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Year: 2015 PMID: 26445096 PMCID: PMC4596374 DOI: 10.1186/s13287-015-0178-y
Source DB: PubMed Journal: Stem Cell Res Ther ISSN: 1757-6512 Impact factor: 6.832
Gene Ontology analysis based on immunomodulatory function-associated genes upregulated in high-density MSC cultures (>90 %)
| Gene Ontology Category_Biological Process | Total number of genes | Number of upregulated genes | Enrichment |
|
|---|---|---|---|---|
| GO:0005576_extracellular region | 21,529 | 91 | 17.89 | <0.001 |
| GO:0022610_biological adhesion | 6813 | 37 | 8.31 | <0.001 |
| GO:0002253_activation of immune response | 1360 | 6 | 3.87 | 0.016 |
| GO:0016477_cell migration | 5281 | 14 | 3.53 | <0.001 |
| GO:0042981_regulation of apoptosis | 7116 | 26 | 2.1 | <0.001 |
| GO:0006955_immune response | 6130 | 23 | 1.81 | 0.0012 |
| GO:0050920_regulation of chemotaxis | 598 | 3 | 1.79 | 0.084 |
| GO:0048771_tissue remodeling | 632 | 5 | 1.67 | 0.001 |
| GO:0001558_regulation of cell growth | 1805 | 8 | 1.32 | 0.033 |
| GO:0042611_MHC protein complex | 759 | 4 | 1.05 | 0.063 |
Microarray analysis was performed to compare the gene expression profiles of MSCs that were seeded at a density of 200 and 5000 cells/cm2, which were around 50 % and 90 % confluent on day 7, respectively. Upregulated genes in MSC cultures seeded at a density of 5000 cells/cm2 were sorted on the basis of gene expression profiles (fold change > 2 and P value < 0.05) and classified according to their related biological processes based on Gene Ontology terms by using DAVID Bioinformatics Resources 6.7
MSC mesenchymal stem cell, DAVID Database for Annotation, Visualization and Integrated Discovery
Fig. 1Strategies to obtain human MSCs with improved immunosuppressive properties. CCL8 chemokine (C-C motif) ligand 8, CD274(B7H1) B7 homolog 1 (also known as programmed death-ligand 1), CXCL9 chemokine (C-X-C motif) ligand 9, CXCL10 chemokine (C-X-C motif) ligand 10, CXCR7 chemokine (C-X-C motif) receptor type 7, HLA-DRA major histocompatibility complex, class II, DR alpha chain, ICAM2 intercellular adhesion molecule 2, IDO indoleamine 2,3-dioxygenase, IFN-γ interferon-gamma, MSC mesenchymal stem cell, PTGDS prostaglandin D2 synthase, PTGES prostaglandin E synthase, ULBP1 natural-killer group 2 member D ligand 1, VCAM1 vascular cell adhesion protein 1
Gene Ontology analysis based on immunomodulatory function-associated genes upregulated in IFN-γ-treated MSC cultures
| Gene Ontology Category_Biological Process | Total number of genes | Number of upregulated genes | Enrichment |
|
|---|---|---|---|---|
| GO:0006952_defense response | 9245 | 75 | 16.99 | <0.001 |
| GO:0006954_inflammatory response | 2365 | 40 | 16.99 | <0.001 |
| GO:0009611_response to wounding | 4854 | 49 | 16.99 | <0.001 |
| GO:0019882_antigen processing and presentation | 1111 | 26 | 8.85 | <0.001 |
| GO:0006955_immune response | 6130 | 39 | 8.85 | <0.001 |
| GO:0005125_cytokine activity | 1242 | 22 | 5.85 | <0.001 |
| GO:0050863_regulation of T-cell activation | 1122 | 17 | 3.74 | <0.001 |
| GO:0042981_regulation of apoptotic process | 7118 | 44 | 3.58 | <0.001 |
| GO:0002819_regulation of adaptive immune response | 536 | 10 | 2.73 | <0.001 |
| GO:0045088_regulation of innate immune response | 852 | 9 | 2.33 | <0.001 |
Microarray analysis was performed to evaluate the effect of IFN-γ pre-treatment on MSCs. Upregulated genes in MSC cultures pre-treated with IFN-γ were sorted on the basis of gene expression profiles (fold change > 2 and P value < 0.05) and classified according to their related biological processes based on Gene Ontology terms by using DAVID Bioinformatics Resources 6.7
IFN-γ interferon-gamma, MSC mesenchymal stem cell, DAVID Database for Annotation, Visualization and Integrated Discovery