Literature DB >> 26443734

Nucleotides, Nucleosides, and Nucleobases.

Kaj Frank Jensen, Gert Dandanell, Bjarne Hove-Jensen, Martin WillemoËs.   

Abstract

We review literature on the metabolism of ribo- and deoxyribonucleotides, nucleosides, and nucleobases in Escherichia coli and Salmonella,including biosynthesis, degradation, interconversion, and transport. Emphasis is placed on enzymology and regulation of the pathways, at both the level of gene expression and the control of enzyme activity. The paper begins with an overview of the reactions that form and break the N-glycosyl bond, which binds the nucleobase to the ribosyl moiety in nucleotides and nucleosides, and the enzymes involved in the interconversion of the different phosphorylated states of the nucleotides. Next, the de novo pathways for purine and pyrimidine nucleotide biosynthesis are discussed in detail.Finally, the conversion of nucleosides and nucleobases to nucleotides, i.e.,the salvage reactions, are described. The formation of deoxyribonucleotides is discussed, with emphasis on ribonucleotidereductase and pathways involved in fomation of dUMP. At the end, we discuss transport systems for nucleosides and nucleobases and also pathways for breakdown of the nucleobases.

Entities:  

Year:  2008        PMID: 26443734     DOI: 10.1128/ecosalplus.3.6.2

Source DB:  PubMed          Journal:  EcoSal Plus        ISSN: 2324-6200


  23 in total

1.  De Novo Guanine Biosynthesis but Not the Riboswitch-Regulated Purine Salvage Pathway Is Required for Staphylococcus aureus Infection In Vivo.

Authors:  Eric M Kofoed; Donghong Yan; Anand K Katakam; Mike Reichelt; Baiwei Lin; Janice Kim; Summer Park; Shailesh V Date; Ian R Monk; Min Xu; Cary D Austin; Till Maurer; Man-Wah Tan
Journal:  J Bacteriol       Date:  2016-06-27       Impact factor: 3.490

Review 2.  Utilization of glyphosate as phosphate source: biochemistry and genetics of bacterial carbon-phosphorus lyase.

Authors:  Bjarne Hove-Jensen; David L Zechel; Bjarne Jochimsen
Journal:  Microbiol Mol Biol Rev       Date:  2014-03       Impact factor: 11.056

3.  Bacillus halodurans Strain C125 Encodes and Synthesizes Enzymes from Both Known Pathways To Form dUMP Directly from Cytosine Deoxyribonucleotides.

Authors:  Christian Berg Oehlenschlæger; Monika Nøhr Løvgreen; Eva Reinauer; Emilia Lehtinen; Marie-Louise Lindberg Pind; Pernille Harris; Jan Martinussen; Martin Willemoës
Journal:  Appl Environ Microbiol       Date:  2015-03-06       Impact factor: 4.792

4.  Comparative Analyses of Transport Proteins Encoded within the Genomes of Bdellovibrio bacteriovorus HD100 and Bdellovibrio exovorus JSS.

Authors:  Fereshteh Heidari Tajabadi; Arturo Medrano-Soto; Masoud Ahmadzadeh; Gholamreza Salehi Jouzani; Milton H Saier
Journal:  J Mol Microbiol Biotechnol       Date:  2017-12-07

5.  Influence of IS256 on Genome Variability and Formation of Small-Colony Variants in Staphylococcus aureus.

Authors:  Franziska Kleinert; René Kallies; Michael Hort; Annegret Zweynert; Christiane Szekat; Michael Nagel; Gabriele Bierbaum
Journal:  Antimicrob Agents Chemother       Date:  2017-07-25       Impact factor: 5.191

6.  Lysinibacillus fusiformis M5 Induces Increased Complexity in Bacillus subtilis 168 Colony Biofilms via Hypoxanthine.

Authors:  Ramses Gallegos-Monterrosa; Stefanie Kankel; Sebastian Götze; Robert Barnett; Pierre Stallforth; Ákos T Kovács
Journal:  J Bacteriol       Date:  2017-10-17       Impact factor: 3.490

Review 7.  Phosphoribosyl Diphosphate (PRPP): Biosynthesis, Enzymology, Utilization, and Metabolic Significance.

Authors:  Bjarne Hove-Jensen; Kasper R Andersen; Mogens Kilstrup; Jan Martinussen; Robert L Switzer; Martin Willemoës
Journal:  Microbiol Mol Biol Rev       Date:  2016-12-28       Impact factor: 11.056

8.  Mining RNA-seq data reveals the massive regulon of GcvB small RNA and its physiological significance in maintaining amino acid homeostasis in Escherichia coli.

Authors:  Masatoshi Miyakoshi; Haruna Okayama; Maxence Lejars; Takeshi Kanda; Yuki Tanaka; Kaori Itaya; Miki Okuno; Takehiko Itoh; Noritaka Iwai; Masaaki Wachi
Journal:  Mol Microbiol       Date:  2021-11-09       Impact factor: 3.979

9.  The phtC-phtD locus equips Legionella pneumophila for thymidine salvage and replication in macrophages.

Authors:  Maris V Fonseca; John-Demian Sauer; Sebastien Crepin; Brenda Byrne; Michele S Swanson
Journal:  Infect Immun       Date:  2013-12-02       Impact factor: 3.441

10.  Yeast-based reference materials for quantitative metabolomics.

Authors:  Hendri Wasito; Gerrit Hermann; Veronika Fitz; Christina Troyer; Stephan Hann; Gunda Koellensperger
Journal:  Anal Bioanal Chem       Date:  2021-10-13       Impact factor: 4.478

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