Literature DB >> 26443363

Regulation of Serine, Glycine, and One-Carbon Biosynthesis.

George V Stauffer.   

Abstract

The biosynthesis of serine, glycine, and one-carbon (C1) units constitutes a major metabolic pathway in Escherichia coli and Salmonella enterica serovar Typhimurium. C1 units derived from serine and glycine are used in the synthesis of purines, histidine, thymine, pantothenate, and methionine and in the formylation of the aminoacylated initiator fMet-TRNAfMet used to start translation in E. coli and serovar Typhimurium. The need for serine, glycine, and C1 units in many cellular functions makes it necessary for the genes encoding enzymes for their synthesis to be carefully regulated to meet the changing demands of the cell for these intermediates. This review discusses the regulation of the following genes: serA, serB, and serC; gly gene; gcvTHP operon; lpdA; gcvA and gcvR; and gcvB genes. Threonine utilization (the Tut cycle) constitutes a secondary pathway for serine and glycine biosynthesis. L-Serine inhibits the growth of E. coli cells in GM medium, and isoleucine releases this growth inhibition. The E. coli glycine transport system (Cyc) has been shown to transport glycine, D-alanine, D-serine, and the antibiotic D-cycloserine. Transport systems often play roles in the regulation of gene expression, by transporting effector molecules into the cell, where they are sensed by soluble or membrane-bound regulatory proteins.

Entities:  

Year:  2004        PMID: 26443363     DOI: 10.1128/ecosalplus.3.6.1.2

Source DB:  PubMed          Journal:  EcoSal Plus        ISSN: 2324-6200


  10 in total

1.  A Decrease in Serine Levels during Growth Transition Triggers Biofilm Formation in Bacillus subtilis.

Authors:  Jennifer Greenwich; Alicyn Reverdy; Kevin Gozzi; Grace Di Cecco; Tommy Tashjian; Veronica Godoy-Carter; Yunrong Chai
Journal:  J Bacteriol       Date:  2019-07-10       Impact factor: 3.490

2.  Challenges of ligand identification for the second wave of orphan riboswitch candidates.

Authors:  Etienne B Greenlee; Shira Stav; Ruben M Atilho; Kenneth I Brewer; Kimberly A Harris; Sarah N Malkowski; Gayan Mirihana Arachchilage; Kevin R Perkins; Madeline E Sherlock; Ronald R Breaker
Journal:  RNA Biol       Date:  2018-02-01       Impact factor: 4.652

3.  Mining RNA-seq data reveals the massive regulon of GcvB small RNA and its physiological significance in maintaining amino acid homeostasis in Escherichia coli.

Authors:  Masatoshi Miyakoshi; Haruna Okayama; Maxence Lejars; Takeshi Kanda; Yuki Tanaka; Kaori Itaya; Miki Okuno; Takehiko Itoh; Noritaka Iwai; Masaaki Wachi
Journal:  Mol Microbiol       Date:  2021-11-09       Impact factor: 3.979

4.  2-Aminoacrylate Stress Induces a Context-Dependent Glycine Requirement in ridA Strains of Salmonella enterica.

Authors:  Dustin C Ernst; Diana M Downs
Journal:  J Bacteriol       Date:  2015-11-16       Impact factor: 3.490

5.  Functional reconstitution of a bacterial CO2 concentrating mechanism in Escherichia coli.

Authors:  Avi I Flamholz; Eli Dugan; Cecilia Blikstad; Shmuel Gleizer; Roee Ben-Nissan; Shira Amram; Niv Antonovsky; Sumedha Ravishankar; Elad Noor; Arren Bar-Even; Ron Milo; David F Savage
Journal:  Elife       Date:  2020-10-21       Impact factor: 8.140

6.  Arginine-Rich Small Proteins with a Domain of Unknown Function, DUF1127, Play a Role in Phosphate and Carbon Metabolism of Agrobacterium tumefaciens.

Authors:  Alexander Kraus; Mareen Weskamp; Jennifer Zierles; Miriam Balzer; Ramona Busch; Jessica Eisfeld; Jan Lambertz; Marc M Nowaczyk; Franz Narberhaus
Journal:  J Bacteriol       Date:  2020-10-22       Impact factor: 3.490

7.  Transcriptome Analysis of Escherichia coli during dGTP Starvation.

Authors:  Mark Itsko; Roel M Schaaper
Journal:  J Bacteriol       Date:  2016-05-13       Impact factor: 3.490

8.  An NAD synthetic reaction bypasses the lipoate requirement for aerobic growth of Escherichia coli strains blocked in succinate catabolism.

Authors:  Fatemah A Hermes; John E Cronan
Journal:  Mol Microbiol       Date:  2014-10-10       Impact factor: 3.501

9.  A systematically-revised ribosome profiling method for bacteria reveals pauses at single-codon resolution.

Authors:  Fuad Mohammad; Rachel Green; Allen R Buskirk
Journal:  Elife       Date:  2019-02-06       Impact factor: 8.140

10.  The serine transporter SdaC prevents cell lysis upon glucose depletion in Escherichia coli.

Authors:  Michelle A Kriner; Arvind R Subramaniam
Journal:  Microbiologyopen       Date:  2019-11-03       Impact factor: 3.139

  10 in total

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