Literature DB >> 26438855

Current extinction rates of reptiles and amphibians.

John Alroy1.   

Abstract

There is broad concern that a mass extinction of amphibians and reptiles is now underway. Here I apply an extremely conservative Bayesian method to estimate the number of recent amphibian and squamate extinctions in nine important tropical and subtropical regions. The data stem from a combination of museum collection databases and published site surveys. The method computes an extinction probability for each species by considering its sighting frequency and last sighting date. It infers hardly any extinction when collection dates are randomized and it provides underestimates when artificial extinction events are imposed. The method also appears to be insensitive to trends in sampling; therefore, the counts it provides are absolute minimums. Extinctions or severe population crashes have accumulated steadily since the 1970s and 1980s, and at least 3.1% of frog species have already disappeared. Based on these data and this conservative method, the best estimate of the global grand total is roughly 200 extinctions. Consistent with previous results, frog losses are heavy in Latin America, which has been greatly affected by the pathogenic chytrid fungus Batrachochytrium dendrobatidis. Extinction rates are now four orders-of-magnitude higher than background, and at least another 6.9% of all frog species may be lost within the next century, even if there is no acceleration in the growth of environmental threats.

Entities:  

Keywords:  Bayesian methods; amphibians; extinction rates; reptiles

Mesh:

Year:  2015        PMID: 26438855      PMCID: PMC4620882          DOI: 10.1073/pnas.1508681112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  8 in total

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Authors:  Michael Hoffmann; Craig Hilton-Taylor; Ariadne Angulo; Monika Böhm; Thomas M Brooks; Stuart H M Butchart; Kent E Carpenter; Janice Chanson; Ben Collen; Neil A Cox; William R T Darwall; Nicholas K Dulvy; Lucy R Harrison; Vineet Katariya; Caroline M Pollock; Suhel Quader; Nadia I Richman; Ana S L Rodrigues; Marcelo F Tognelli; Jean-Christophe Vié; John M Aguiar; David J Allen; Gerald R Allen; Giovanni Amori; Natalia B Ananjeva; Franco Andreone; Paul Andrew; Aida Luz Aquino Ortiz; Jonathan E M Baillie; Ricardo Baldi; Ben D Bell; S D Biju; Jeremy P Bird; Patricia Black-Decima; J Julian Blanc; Federico Bolaños; Wilmar Bolivar-G; Ian J Burfield; James A Burton; David R Capper; Fernando Castro; Gianluca Catullo; Rachel D Cavanagh; Alan Channing; Ning Labbish Chao; Anna M Chenery; Federica Chiozza; Viola Clausnitzer; Nigel J Collar; Leah C Collett; Bruce B Collette; Claudia F Cortez Fernandez; Matthew T Craig; Michael J Crosby; Neil Cumberlidge; Annabelle Cuttelod; Andrew E Derocher; Arvin C Diesmos; John S Donaldson; J W Duckworth; Guy Dutson; S K Dutta; Richard H Emslie; Aljos Farjon; Sarah Fowler; Jörg Freyhof; David L Garshelis; Justin Gerlach; David J Gower; Tandora D Grant; Geoffrey A Hammerson; Richard B Harris; Lawrence R Heaney; S Blair Hedges; Jean-Marc Hero; Baz Hughes; Syed Ainul Hussain; Javier Icochea M; Robert F Inger; Nobuo Ishii; Djoko T Iskandar; Richard K B Jenkins; Yoshio Kaneko; Maurice Kottelat; Kit M Kovacs; Sergius L Kuzmin; Enrique La Marca; John F Lamoreux; Michael W N Lau; Esteban O Lavilla; Kristin Leus; Rebecca L Lewison; Gabriela Lichtenstein; Suzanne R Livingstone; Vimoksalehi Lukoschek; David P Mallon; Philip J K McGowan; Anna McIvor; Patricia D Moehlman; Sanjay Molur; Antonio Muñoz Alonso; John A Musick; Kristin Nowell; Ronald A Nussbaum; Wanda Olech; Nikolay L Orlov; Theodore J Papenfuss; Gabriela Parra-Olea; William F Perrin; Beth A Polidoro; Mohammad Pourkazemi; Paul A Racey; James S Ragle; Mala Ram; Galen Rathbun; Robert P Reynolds; Anders G J Rhodin; Stephen J Richards; Lily O Rodríguez; Santiago R Ron; Carlo Rondinini; Anthony B Rylands; Yvonne Sadovy de Mitcheson; Jonnell C Sanciangco; Kate L Sanders; Georgina Santos-Barrera; Jan Schipper; Caryn Self-Sullivan; Yichuan Shi; Alan Shoemaker; Frederick T Short; Claudio Sillero-Zubiri; Débora L Silvano; Kevin G Smith; Andrew T Smith; Jos Snoeks; Alison J Stattersfield; Andrew J Symes; Andrew B Taber; Bibhab K Talukdar; Helen J Temple; Rob Timmins; Joseph A Tobias; Katerina Tsytsulina; Denis Tweddle; Carmen Ubeda; Sarah V Valenti; Peter Paul van Dijk; Liza M Veiga; Alberto Veloso; David C Wege; Mark Wilkinson; Elizabeth A Williamson; Feng Xie; Bruce E Young; H Resit Akçakaya; Leon Bennun; Tim M Blackburn; Luigi Boitani; Holly T Dublin; Gustavo A B da Fonseca; Claude Gascon; Thomas E Lacher; Georgina M Mace; Susan A Mainka; Jeffery A McNeely; Russell A Mittermeier; Gordon McGregor Reid; Jon Paul Rodriguez; Andrew A Rosenberg; Michael J Samways; Jane Smart; Bruce A Stein; Simon N Stuart
Journal:  Science       Date:  2010-10-26       Impact factor: 47.728

2.  Status and trends of amphibian declines and extinctions worldwide.

Authors:  Simon N Stuart; Janice S Chanson; Neil A Cox; Bruce E Young; Ana S L Rodrigues; Debra L Fischman; Robert W Waller
Journal:  Science       Date:  2004-10-14       Impact factor: 47.728

3.  Vast underestimation of Madagascar's biodiversity evidenced by an integrative amphibian inventory.

Authors:  David R Vieites; Katharina C Wollenberg; Franco Andreone; Jörn Köhler; Frank Glaw; Miguel Vences
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-04       Impact factor: 11.205

4.  Colloquium paper: are we in the midst of the sixth mass extinction? A view from the world of amphibians.

Authors:  David B Wake; Vance T Vredenburg
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-11       Impact factor: 11.205

5.  Deforestation history of the eastern rain forests of madagascar from satellite images.

Authors:  G M Green; R W Sussman
Journal:  Science       Date:  1990-04-13       Impact factor: 47.728

6.  The use of sighting records to infer species extinctions: an evaluation of different methods.

Authors:  Marcelo M Rivadeneira; Gene Hunt; Kaustuv Roy
Journal:  Ecology       Date:  2009-05       Impact factor: 5.499

7.  The role of natural history collections in documenting species declines.

Authors:  H B Shaffer; R N Fisher; C Davidson
Journal:  Trends Ecol Evol       Date:  1998-01-01       Impact factor: 17.712

8.  Coincident mass extirpation of neotropical amphibians with the emergence of the infectious fungal pathogen Batrachochytrium dendrobatidis.

Authors:  Tina L Cheng; Sean M Rovito; David B Wake; Vance T Vredenburg
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-04       Impact factor: 11.205

  8 in total
  23 in total

1.  Reply to Solow: Sense and nonsense in the choice of extinction priors.

Authors:  John Alroy
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-16       Impact factor: 11.205

2.  On Bayesian inference about extinction.

Authors:  Andrew R Solow
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-16       Impact factor: 11.205

3.  Functional variation at an expressed MHC class IIβ locus associates with Ranavirus infection intensity in larval anuran populations.

Authors:  Anna E Savage; Carly R Muletz-Wolz; Evan H Campbell Grant; Robert C Fleischer; Kevin P Mulder
Journal:  Immunogenetics       Date:  2019-02-13       Impact factor: 2.846

Review 4.  Batrachochytrium salamandrivorans and the Risk of a Second Amphibian Pandemic.

Authors:  Tiffany A Yap; Natalie T Nguyen; Megan Serr; Alexander Shepack; Vance T Vredenburg
Journal:  Ecohealth       Date:  2017-11-16       Impact factor: 3.184

5.  On the prior distribution of extinction time.

Authors:  Andrew R Solow
Journal:  Biol Lett       Date:  2016-06-08       Impact factor: 3.703

6.  Clarifying the relationship between body size and extinction risk in amphibians by complete mapping of model space.

Authors:  Marcel Cardillo
Journal:  Proc Biol Sci       Date:  2021-02-03       Impact factor: 5.349

7.  A global ecological signal of extinction risk in terrestrial vertebrates.

Authors:  Maya J Munstermann; Noel A Heim; Douglas J McCauley; Jonathan L Payne; Nathan S Upham; Steve C Wang; Matthew L Knope
Journal:  Conserv Biol       Date:  2021-12-14       Impact factor: 7.563

8.  Large-scale reptile extinctions following European colonization of the Guadeloupe Islands.

Authors:  Corentin Bochaton; Emmanuel Paradis; Salvador Bailon; Sandrine Grouard; Ivan Ineich; Arnaud Lenoble; Olivier Lorvelec; Anne Tresset; Nicole Boivin
Journal:  Sci Adv       Date:  2021-05-19       Impact factor: 14.136

9.  Experimental evidence for beneficial effects of projected climate change on hibernating amphibians.

Authors:  Bálint Üveges; Katharina Mahr; Márk Szederkényi; Veronika Bókony; Herbert Hoi; Attila Hettyey
Journal:  Sci Rep       Date:  2016-05-27       Impact factor: 4.379

10.  Spatial Ecology of the American Crocodile in a Tropical Pacific Island in Central America.

Authors:  Sergio A Balaguera-Reina; Miryam Venegas-Anaya; Andrés Sánchez; Italo Arbelaez; Harilaos A Lessios; Llewellyn D Densmore
Journal:  PLoS One       Date:  2016-06-09       Impact factor: 3.240

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