| Literature DB >> 26435703 |
Jian Lü1, Li-Wei Han2, Nada H Alsmail3, Alexander J Blake3, William Lewis3, Rong Cao4, Martin Schröder5.
Abstract
The crystallization of two dihydropyridyl molecules, 1,4-bis(4-(3,5-dicyano-2,6-dipyridyl)dihydropyridyl)benzene ([C40H24N10]·2DMF, 1·2DMF; DMF = dimethylformamide) and 1,4-bis(4-(3,5-dicyano-2,6-dipyridyl)dihydropyridyl)phenylbenzene ([C46H28N10]·2DMF, 3·2DMF), and their respective oxidized pyridyl analogues, 1,4-bis(4-(3,5-dicyano-2,6-dipyridyl)pyridyl)benzene ([C40H20N10], 2) and 1,4-bis(4-(3,5-dicyano-2,6-dipyridyl)pyridyl)phenylbenzene ([C46H24N10]·DMF, 4·DMF), has been achieved under solvothermal conditions. The dihydropyridyl molecules are converted to their pyridyl products via in situ oxidative dehydrogenation in solution. The structures of the four molecules have been fully characterized by single crystal and powder X-ray diffraction. The oxidized pyridyl products, 2 and 4, are more elongated due to aromatization of the dihydropyridyl rings at each end of their parent molecules 1 and 3, respectively. The solid-state supramolecular structures of the pyridyl molecules are distinct from the dihydropyridyl molecules in terms of their hierarchical assembly via hydrogen bonding due to the loss of primary N-H hydrogen bond donors in the two electron oxidized tectons. Overall, the geometrically shorter molecules 1 and 3 display close-packed structures, whereas the more extended 2 and 4 assemble into more open supramolecular systems.Entities:
Year: 2015 PMID: 26435703 PMCID: PMC4583071 DOI: 10.1021/acs.cgd.5b00395
Source DB: PubMed Journal: Cryst Growth Des ISSN: 1528-7483 Impact factor: 4.076
Scheme 1Views of the Structures of the Dihydropyridyl and Pyridyl Tectons
Crystal Data and Structure Refinement for Compounds 1–4
| chem formula | C46H38N12O2 | C40H20N10 | C52H42N12O2 | C49H31N11O |
| formula mass | 790.88 | 640.66 | 866.97 | 789.94 |
| cryst syst | monoclinic | monoclinic | monoclinic | orthorhombic |
| space group | ||||
| 11.285(2) | 34.345(3) | 16.324(3) | 7.6989(6) | |
| 32.787(7) | 9.2471(14) | 6.8720(13) | 27.8771(14) | |
| 10.517(2) | 10.6446(10) | 21.928(4) | 34.694(3) | |
| α/deg | 90 | 90 | 90 | 90 |
| β/deg | 98.979(4) | 104.008(10) | 101.657(3) | 90 |
| γ/deg | 90 | 90 | 90 | 90 |
| cell vol/Å3 | 3843.6(14) | 3280.1(7) | 2409.1(8) | 7446.1(9) |
| 4 | 4 | 2 | 8 | |
| reflns collected | 21019 | 6837 | 12639 | 20302 |
| indep reflns | 7514 | 3227 | 4730 | 8630 |
| 0.0768 | 0.0298 | 0.0449 | 0.0486 | |
| final | 0.0683 | 0.0561 | 0.0874 | 0.0757 |
| final wR ( | 0.1565 | 0.1101 | 0.2565 | 0.1596 |
| goodness of
fit on | 1.014 | 1.030 | 1.012 | 0.972 |
Figure 1Comparison of the molecular sizes in compounds 1–4.
Selected Hydrogen Bond Lengths and Angles in Compounds 1–4
| D | H | A | ∠(D–H–A)/deg | |||
|---|---|---|---|---|---|---|
| Compound | ||||||
| N8 | H8 | O1#1 | 0.881(10) | 1.934(11) | 2.811(3) | 173 |
| N3 | H3 | O2#2 | 0.882(10) | 1.971(15) | 2.818(3) | 161 |
| Compound | ||||||
| C7 | H7 | N1#1 | 0.95 | 2.55 | 3.398(4) | 148 |
| Compound | ||||||
| N3 | H3 | N2#1 | 0.886(10) | 2.019(14) | 2.887(4) | 166 |
| C10 | H10 | N5#1 | 0.95 | 2.66 | 3.430(5) | 138 |
| C2 | H2 | N4#2 | 0.95 | 2.47 | 3.324(5) | 149 |
| Compound | ||||||
| C4 | H4 | N51 | 0.93 | 2.60 | 3.501(4) | 164 |
| C21 | H21 | N52 | 0.93 | 2.62 | 3.536(4) | 171 |
Compound 1: #1: −1 + x, +y, +z. #2: 2 – x, 1 – y ,–z.
Compound 2: #1: 1/2 – x, −1/2 + y, 1/2 – z.
Compound 3: #1: 1 – x, −1/2 + y, 1/2 – z. #2: −x, −1/2 + y, 1/2 – z.
Compound 4: #1: 3/2 – x, −y, 1/2 + z. #2: 1/2 + x, 1/2 – y, 1 – z.
Figure 2View of hydrogen bonded square layer structure of compound 1. Guest DMF molecules are indicated with larger spheres for clarity.
Figure 32D hydrogen bonded layer structure in compound 2.
Figure 4View of the 2D hydrogen bonded square layer structure in 3 (a) and 3D hydrogen bonded supramolecular organic framework in 3 (b).
Figure 52D hydrogen bonded honeycomb-like layer structure in compound 4. Inset: a view of the hydrogen bonding interactions of 4.