Literature DB >> 26433253

Diverse Applications of Environmental DNA Methods in Parasitology.

David Bass1, Grant D Stentiford2, D T J Littlewood3, Hanna Hartikainen4.   

Abstract

Nucleic acid extraction and sequencing of genes from organisms within environmental samples encompasses a variety of techniques collectively referred to as environmental DNA or 'eDNA'. The key advantages of eDNA analysis include the detection of cryptic or otherwise elusive organisms, large-scale sampling with fewer biases than specimen-based methods, and generation of data for molecular systematics. These are particularly relevant for parasitology because parasites can be difficult to locate and are morphologically intractable and genetically divergent. However, parasites have rarely been the focus of eDNA studies. Focusing on eukaryote parasites, we review the increasing diversity of the 'eDNA toolbox'. Combining eDNA methods with complementary tools offers much potential to understand parasite communities, disease risk, and parasite roles in broader ecosystem processes such as food web structuring and community assembly. Crown
Copyright © 2015. Published by Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 26433253     DOI: 10.1016/j.pt.2015.06.013

Source DB:  PubMed          Journal:  Trends Parasitol        ISSN: 1471-4922


  37 in total

Review 1.  Complementary approaches to diagnosing marine diseases: a union of the modern and the classic.

Authors:  Colleen A Burge; Carolyn S Friedman; Rodman Getchell; Marcia House; Kevin D Lafferty; Laura D Mydlarz; Katherine C Prager; Kathryn P Sutherland; Tristan Renault; Ikunari Kiryu; Rebecca Vega-Thurber
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-03-05       Impact factor: 6.237

2.  Environmental DNA for improved detection and environmental surveillance of schistosomiasis.

Authors:  Mita E Sengupta; Micaela Hellström; Henry C Kariuki; Annette Olsen; Philip F Thomsen; Helena Mejer; Eske Willerslev; Mariam T Mwanje; Henry Madsen; Thomas K Kristensen; Anna-Sofie Stensgaard; Birgitte J Vennervald
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-11       Impact factor: 11.205

Review 3.  To Reduce the Global Burden of Human Schistosomiasis, Use 'Old Fashioned' Snail Control.

Authors:  Susanne H Sokolow; Chelsea L Wood; Isabel J Jones; Kevin D Lafferty; Armand M Kuris; Michael H Hsieh; Giulio A De Leo
Journal:  Trends Parasitol       Date:  2017-11-07

4.  Improved high throughput protocol for targeting eukaryotic symbionts in metazoan and eDNA samples.

Authors:  Diana Minardi; David Ryder; Javier Del Campo; Vera Garcia Fonseca; Rose Kerr; Stein Mortensen; Alberto Pallavicini; David Bass
Journal:  Mol Ecol Resour       Date:  2021-10-01       Impact factor: 8.678

Review 5.  Microsporidia - Emergent Pathogens in the Global Food Chain.

Authors:  G D Stentiford; -J J Becnel; L M Weiss; P J Keeling; E S Didier; B-A P Williams; S Bjornson; M-L Kent; M A Freeman; M J F Brown; E-R Troemel; K Roesel; Y Sokolova; K F Snowden; L Solter
Journal:  Trends Parasitol       Date:  2016-01-19

6.  Seasonal dynamics and potential drivers of ranavirus epidemics in wood frog populations.

Authors:  Emily M Hall; C S Goldberg; J L Brunner; E J Crespi
Journal:  Oecologia       Date:  2018-10-22       Impact factor: 3.225

7.  Validation of environmental DNA sampling for determination of Ceratonova shasta (Cnidaria: Myxozoa) distribution in Plumas National Forest, CA.

Authors:  Christine A Richey; Kirsten V Kenelty; Kristina Van Stone Hopkins; Brittany N Stevens; Beatriz Martínez-López; Sascha L Hallett; Stephen D Atkinson; Jerri L Bartholomew; Esteban Soto
Journal:  Parasitol Res       Date:  2020-01-02       Impact factor: 2.289

8.  New Paradigms to Help Solve the Global Aquaculture Disease Crisis.

Authors:  Grant D Stentiford; Kallaya Sritunyalucksana; Timothy W Flegel; Bryony A P Williams; Boonsirm Withyachumnarnkul; Orn Itsathitphaisarn; David Bass
Journal:  PLoS Pathog       Date:  2017-02-02       Impact factor: 6.823

9.  Plant Rhizosphere Selection of Plasmodiophorid Lineages from Bulk Soil: The Importance of "Hidden" Diversity.

Authors:  David Bass; Christopher van der Gast; Serena Thomson; Sigrid Neuhauser; Sally Hilton; Gary D Bending
Journal:  Front Microbiol       Date:  2018-02-13       Impact factor: 5.640

10.  Laboratory diagnosis of soil transmitted helminthiasis.

Authors:  Sumeeta Khurana; Shveta Sethi
Journal:  Trop Parasitol       Date:  2017 Jul-Dec
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