Literature DB >> 26430567

Trans-splicing in metazoans: A link to translational control?

Gemma Danks1, Eric M Thompson2.   

Abstract

The trans-splicing of a spliced-leader RNA to a subset of mRNAs is a phenomenon that occurs in many species, including Caenorhabditis elegans, and yet the driving force for its evolution in disparate groups of animals remains unclear. Polycistronic mRNA resulting from the transcription of operons is resolved via trans-splicing, but operons comprise only a sub-set of trans-spliced genes. Using the marine chordate, Oikopleura dioica, we recently tested the hypothesis that metazoan operons accelerate recovery from growth arrest. We found no supporting evidence for this in O. dioica. Instead we found a striking relationship between trans-splicing and maternal mRNA in O. dioica, C. elegans and the ascidian, Ciona intestinalis. Furthermore, in O. dioica and C. elegans, we found evidence to suggest a role for mTOR signaling in the translational control of growth-related, trans-spliced maternal mRNAs. We propose that this may be a mechanism for adjusting egg number in response to nutrient levels in these species.

Entities:  

Keywords:  Endocycle; TOP motif; TOR signaling; growth arrest; maternal RNA; oogenesis; operon

Year:  2015        PMID: 26430567      PMCID: PMC4588222          DOI: 10.1080/21624054.2015.1046030

Source DB:  PubMed          Journal:  Worm        ISSN: 2162-4046


  18 in total

Review 1.  SL trans-splicing: easy come or easy go?

Authors:  Kenneth E M Hastings
Journal:  Trends Genet       Date:  2005-04       Impact factor: 11.639

2.  The Oikopleura coenocyst, a unique chordate germ cell permitting rapid, extensive modulation of oocyte production.

Authors:  Philippe Ganot; Jean-Marie Bouquet; Torben Kallesøe; Eric M Thompson
Journal:  Dev Biol       Date:  2006-10-21       Impact factor: 3.582

3.  The cytoskeleton organizes germ nuclei with divergent fates and asynchronous cycles in a common cytoplasm during oogenesis in the chordate Oikopleura.

Authors:  Philippe Ganot; Torben Kallesøe; Eric M Thompson
Journal:  Dev Biol       Date:  2006-10-21       Impact factor: 3.582

4.  Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate.

Authors:  France Denoeud; Simon Henriet; Sutada Mungpakdee; Jean-Marc Aury; Corinne Da Silva; Henner Brinkmann; Jana Mikhaleva; Lisbeth Charlotte Olsen; Claire Jubin; Cristian Cañestro; Jean-Marie Bouquet; Gemma Danks; Julie Poulain; Coen Campsteijn; Marcin Adamski; Ismael Cross; Fekadu Yadetie; Matthieu Muffato; Alexandra Louis; Stephen Butcher; Georgia Tsagkogeorga; Anke Konrad; Sarabdeep Singh; Marit Flo Jensen; Evelyne Huynh Cong; Helen Eikeseth-Otteraa; Benjamin Noel; Véronique Anthouard; Betina M Porcel; Rym Kachouri-Lafond; Atsuo Nishino; Matteo Ugolini; Pascal Chourrout; Hiroki Nishida; Rein Aasland; Snehalata Huzurbazar; Eric Westhof; Frédéric Delsuc; Hans Lehrach; Richard Reinhardt; Jean Weissenbach; Scott W Roy; François Artiguenave; John H Postlethwait; J Robert Manak; Eric M Thompson; Olivier Jaillon; Louis Du Pasquier; Pierre Boudinot; David A Liberles; Jean-Nicolas Volff; Hervé Philippe; Boris Lenhard; Hugues Roest Crollius; Patrick Wincker; Daniel Chourrout
Journal:  Science       Date:  2010-11-18       Impact factor: 47.728

5.  Comparative organization of follicle, accessory cells and spawning anlagen in dynamic semelparous clutch manipulators, the urochordate Oikopleuridae.

Authors:  Philippe Ganot; Jean-Marie Bouquet; Eric M Thompson
Journal:  Biol Cell       Date:  2006-07       Impact factor: 4.458

6.  High-throughput sequence analysis of Ciona intestinalis SL trans-spliced mRNAs: alternative expression modes and gene function correlates.

Authors:  Jun Matsumoto; Ken Dewar; Jessica Wasserscheid; Graham B Wiley; Simone L Macmil; Bruce A Roe; Robert W Zeller; Yutaka Satou; Kenneth E M Hastings
Journal:  Genome Res       Date:  2010-03-08       Impact factor: 9.043

7.  Trans-splicing and operons in metazoans: translational control in maternally regulated development and recovery from growth arrest.

Authors:  Gemma B Danks; Martina Raasholm; Coen Campsteijn; Abby M Long; J Robert Manak; Boris Lenhard; Eric M Thompson
Journal:  Mol Biol Evol       Date:  2014-12-17       Impact factor: 16.240

8.  Metazoan operons accelerate recovery from growth-arrested states.

Authors:  Alon Zaslaver; L Ryan Baugh; Paul W Sternberg
Journal:  Cell       Date:  2011-06-10       Impact factor: 41.582

9.  Oocyte selection is concurrent with meiosis resumption in the coenocystic oogenesis of Oikopleura.

Authors:  Philippe Ganot; Alexandra Moosmann-Schulmeister; Eric M Thompson
Journal:  Dev Biol       Date:  2008-09-25       Impact factor: 3.582

10.  Conserved translatome remodeling in nematode species executing a shared developmental transition.

Authors:  Michael Stadler; Andrew Fire
Journal:  PLoS Genet       Date:  2013-10-03       Impact factor: 5.917

View more
  2 in total

1.  Sex-specific chromatin landscapes in an ultra-compact chordate genome.

Authors:  Pavla Navratilova; Gemma Barbara Danks; Abby Long; Stephen Butcher; John Robert Manak; Eric M Thompson
Journal:  Epigenetics Chromatin       Date:  2017-01-17       Impact factor: 4.954

2.  Trans-splicing of mRNAs links gene transcription to translational control regulated by mTOR.

Authors:  Gemma B Danks; Heloisa Galbiati; Martina Raasholm; Yamila N Torres Cleuren; Eivind Valen; Pavla Navratilova; Eric M Thompson
Journal:  BMC Genomics       Date:  2019-11-29       Impact factor: 3.969

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.