Literature DB >> 26423587

Laser Microdissection-Mediated Isolation and In Vitro Transcriptional Amplification of Plant RNA.

Divya Chandran1,2, Michael J Scanlon3, Kazuhiro Ohtsu4, Marja C P Timmermans5, Patrick S Schnable4, Mary C Wildermuth1.   

Abstract

Laser microdissection of cells allows for isolation of specific cells of interest for downstream analyses including transcriptional profiling. Plant cells present unique challenges for laser microdissection due to their cellulosic cell walls and large vacuoles. Here we present protocols for plant tissue preparation, laser microdissection of select plant cells, and linear amplification of RNA from dissected cells. Linear amplification of RNA from dissected cells allows sufficient RNA for subsequent quantitative analysis by RT-PCR, microarray, or RNA sequencing.
Copyright © 2015 John Wiley & Sons, Inc.

Keywords:  RNA amplification; laser microdissection; plants; transcriptomics

Mesh:

Substances:

Year:  2015        PMID: 26423587     DOI: 10.1002/0471142727.mb25a03s112

Source DB:  PubMed          Journal:  Curr Protoc Mol Biol        ISSN: 1934-3647


  2 in total

1.  Boundary domain genes were recruited to suppress bract growth and promote branching in maize.

Authors:  Yuguo Xiao; Jinyan Guo; Zhaobin Dong; Annis Richardson; Erin Patterson; Sidney Mangrum; Seth Bybee; Edoardo Bertolini; Madelaine Bartlett; George Chuck; Andrea L Eveland; Michael J Scanlon; Clinton Whipple
Journal:  Sci Adv       Date:  2022-06-15       Impact factor: 14.957

2.  Laser Microdissection of Specific Stem-Base Tissue Types from Olive Microcuttings for Isolation of High-Quality RNA.

Authors:  Isabel Velada; Esther Menéndez; Rita Teresa Teixeira; Hélia Cardoso; Augusto Peixe
Journal:  Biology (Basel)       Date:  2021-03-10
  2 in total

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