Literature DB >> 26420633

Fluorescence Polarization Based Nucleic Acid Testing for Rapid and Cost-Effective Diagnosis of Infectious Disease.

Ki Soo Park1, Richelle C Charles2,3, Edward T Ryan2,3, Ralph Weissleder4,5, Hakho Lee6.   

Abstract

A new nucleic acid detection method was developed for a rapid and cost-effective diagnosis of infectious disease. This approach relies on the three unique elements: 1) detection probes that regulate DNA polymerase activity in response to the complementary target DNA; 2) universal reporters conjugated with a single fluorophore; and 3) fluorescence polarization (FP) detection. As a proof-of-concept, the assay was used to detect and sub-type Salmonella bacteria with sensitivities down to a single bacterium in less than three hours.
© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA polymerase; aptamer; biosensors; infectious disease; nucleic acid testing

Mesh:

Substances:

Year:  2015        PMID: 26420633      PMCID: PMC4816641          DOI: 10.1002/chem.201502934

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  30 in total

1.  Fluorescence polarization in homogeneous nucleic acid analysis II: 5'-nuclease assay.

Authors:  S Latif; I Bauer-Sardina; K Ranade; K J Livak; P Y Kwok
Journal:  Genome Res       Date:  2001-03       Impact factor: 9.043

2.  Thermodynamics of the binding of Thermus aquaticus DNA polymerase to primed-template DNA.

Authors:  Kausiki Datta; Vince J LiCata
Journal:  Nucleic Acids Res       Date:  2003-10-01       Impact factor: 16.971

3.  Increasing the sensitivity and single-base mismatch selectivity of the molecular beacon using graphene oxide as the "nanoquencher".

Authors:  Chun-Hua Lu; Juan Li; Jing-Jing Liu; Huang-Hao Yang; Xi Chen; Guo-Nan Chen
Journal:  Chemistry       Date:  2010-04-26       Impact factor: 5.236

Review 4.  Real-time PCR in clinical microbiology: applications for routine laboratory testing.

Authors:  M J Espy; J R Uhl; L M Sloan; S P Buckwalter; M F Jones; E A Vetter; J D C Yao; N L Wengenack; J E Rosenblatt; F R Cockerill; T F Smith
Journal:  Clin Microbiol Rev       Date:  2006-01       Impact factor: 26.132

5.  Highly sensitive detection of mercury(II) ions by fluorescence polarization enhanced by gold nanoparticles.

Authors:  Bang-Ce Ye; Bin-Cheng Yin
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

6.  In vivo imaging of specific drug-target binding at subcellular resolution.

Authors:  J M Dubach; C Vinegoni; R Mazitschek; P Fumene Feruglio; L A Cameron; R Weissleder
Journal:  Nat Commun       Date:  2014-05-28       Impact factor: 14.919

Review 7.  Methodologies for Salmonella enterica subsp. enterica subtyping: gold standards and alternatives.

Authors:  Pierre Wattiau; Cécile Boland; Sophie Bertrand
Journal:  Appl Environ Microbiol       Date:  2011-08-19       Impact factor: 4.792

Review 8.  Hospital-acquired infections due to gram-negative bacteria.

Authors:  Anton Y Peleg; David C Hooper
Journal:  N Engl J Med       Date:  2010-05-13       Impact factor: 91.245

9.  Oligonucleotide inhibitors of Taq DNA polymerase facilitate detection of low copy number targets by PCR.

Authors:  C Dang; S D Jayasena
Journal:  J Mol Biol       Date:  1996-11-29       Impact factor: 5.469

10.  Multidrug-resistant Salmonella typhimurium and Salmonella enteritidis identified by multiplex PCR from animals.

Authors:  S J Yang; K Y Park; K S Seo; T E Besser; H S Yoo; K M Noh; S H Kim; S H Kim; B K Lee; Y H Kook; Y H Park
Journal:  J Vet Sci       Date:  2001-12       Impact factor: 1.672

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  7 in total

Review 1.  Development of Integrated Systems for On-Site Infection Detection.

Authors:  Chang Yeol Lee; Ismail Degani; Jiyong Cheong; Ralph Weissleder; Jae-Hyun Lee; Jinwoo Cheon; Hakho Lee
Journal:  Acc Chem Res       Date:  2021-10-22       Impact factor: 24.466

Review 2.  A Comparison of Optical, Electrochemical, Magnetic, and Colorimetric Point-of-Care Biosensors for Infectious Disease Diagnosis.

Authors:  Oleksandra Pashchenko; Tyler Shelby; Tuhina Banerjee; Santimukul Santra
Journal:  ACS Infect Dis       Date:  2018-06-18       Impact factor: 5.084

Review 3.  Nucleic acid aptamer-based methods for diagnosis of infections.

Authors:  Ki Soo Park
Journal:  Biosens Bioelectron       Date:  2017-11-08       Impact factor: 10.618

Review 4.  Advances in Optical Detection of Human-Associated Pathogenic Bacteria.

Authors:  Andrea Locke; Sean Fitzgerald; Anita Mahadevan-Jansen
Journal:  Molecules       Date:  2020-11-11       Impact factor: 4.411

Review 5.  Recent Progress in the Identification of Aptamers Against Bacterial Origins and Their Diagnostic Applications.

Authors:  Nevina E Trunzo; Ka Lok Hong
Journal:  Int J Mol Sci       Date:  2020-07-18       Impact factor: 5.923

Review 6.  Recent advances in fluorescence anisotropy/polarization signal amplification.

Authors:  Xue Xiao; Shujun Zhen
Journal:  RSC Adv       Date:  2022-02-23       Impact factor: 3.361

7.  Rapid identification of health care-associated infections with an integrated fluorescence anisotropy system.

Authors:  Ki Soo Park; Chen-Han Huang; Kyungheon Lee; Yeong-Eun Yoo; Cesar M Castro; Ralph Weissleder; Hakho Lee
Journal:  Sci Adv       Date:  2016-05-06       Impact factor: 14.136

  7 in total

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