Literature DB >> 26420232

Targeting Polycomb systems to regulate gene expression: modifications to a complex story.

Neil P Blackledge1, Nathan R Rose1, Robert J Klose1.   

Abstract

Polycomb group proteins are transcriptional repressors that are essential for normal gene regulation during development. Recent studies suggest that Polycomb repressive complexes (PRCs) recognize and are recruited to their genomic target sites through a range of different mechanisms, which involve transcription factors, CpG island elements and non-coding RNAs. Together with the realization that the interplay between PRC1 and PRC2 is more intricate than was previously appreciated, this has increased our understanding of the vertebrate Polycomb system at the molecular level.

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Year:  2015        PMID: 26420232      PMCID: PMC5469428          DOI: 10.1038/nrm4067

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  75 in total

1.  Epigenetic dynamics of imprinted X inactivation during early mouse development.

Authors:  Ikuhiro Okamoto; Arie P Otte; C David Allis; Danny Reinberg; Edith Heard
Journal:  Science       Date:  2003-12-11       Impact factor: 47.728

Review 2.  Epigenetic regulation of cellular memory by the Polycomb and Trithorax group proteins.

Authors:  Leonie Ringrose; Renato Paro
Journal:  Annu Rev Genet       Date:  2004       Impact factor: 16.830

Review 3.  Transcriptional regulation by Polycomb group proteins.

Authors:  Luciano Di Croce; Kristian Helin
Journal:  Nat Struct Mol Biol       Date:  2013-10       Impact factor: 15.369

4.  Polycomb-dependent H3K27me1 and H3K27me2 regulate active transcription and enhancer fidelity.

Authors:  Karin J Ferrari; Andrea Scelfo; Sriganesh Jammula; Alessandro Cuomo; Iros Barozzi; Alexandra Stützer; Wolfgang Fischle; Tiziana Bonaldi; Diego Pasini
Journal:  Mol Cell       Date:  2013-11-27       Impact factor: 17.970

Review 5.  Noncoding RNA and Polycomb recruitment.

Authors:  Neil Brockdorff
Journal:  RNA       Date:  2013-02-19       Impact factor: 4.942

6.  Polycomb PHF19 binds H3K36me3 and recruits PRC2 and demethylase NO66 to embryonic stem cell genes during differentiation.

Authors:  Gerard L Brien; Guillermo Gambero; David J O'Connell; Emilia Jerman; Siobhán A Turner; Chris M Egan; Eiseart J Dunne; Maike C Jurgens; Kieran Wynne; Lianhua Piao; Amanda J Lohan; Neil Ferguson; Xiaobing Shi; Krishna M Sinha; Brendan J Loftus; Gerard Cagney; Adrian P Bracken
Journal:  Nat Struct Mol Biol       Date:  2012-11-18       Impact factor: 15.369

7.  Spatial separation of Xist RNA and polycomb proteins revealed by superresolution microscopy.

Authors:  Andrea Cerase; Daniel Smeets; Y Amy Tang; Michal Gdula; Felix Kraus; Mikhail Spivakov; Benoit Moindrot; Marion Leleu; Anna Tattermusch; Justin Demmerle; Tatyana B Nesterova; Catherine Green; Arie P Otte; Lothar Schermelleh; Neil Brockdorff
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-27       Impact factor: 11.205

8.  RYBP-PRC1 complexes mediate H2A ubiquitylation at polycomb target sites independently of PRC2 and H3K27me3.

Authors:  Lígia Tavares; Emilia Dimitrova; David Oxley; Judith Webster; Raymond Poot; Jeroen Demmers; Karel Bezstarosti; Stephen Taylor; Hiroki Ura; Hiroshi Koide; Anton Wutz; Miguel Vidal; Sarah Elderkin; Neil Brockdorff
Journal:  Cell       Date:  2012-02-09       Impact factor: 41.582

9.  Ras-induced changes in H3K27me3 occur after those in transcriptional activity.

Authors:  Masaki Hosogane; Ryo Funayama; Yuichiro Nishida; Takeshi Nagashima; Keiko Nakayama
Journal:  PLoS Genet       Date:  2013-08-29       Impact factor: 5.917

10.  PRC2 binds active promoters and contacts nascent RNAs in embryonic stem cells.

Authors:  Syuzo Kaneko; Jinsook Son; Steven S Shen; Danny Reinberg; Roberto Bonasio
Journal:  Nat Struct Mol Biol       Date:  2013-10-20       Impact factor: 15.369

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  146 in total

1.  Nuclear condensates of the Polycomb protein chromobox 2 (CBX2) assemble through phase separation.

Authors:  Roubina Tatavosian; Samantha Kent; Kyle Brown; Tingting Yao; Huy Nguyen Duc; Thao Ngoc Huynh; Chao Yu Zhen; Brian Ma; Haobin Wang; Xiaojun Ren
Journal:  J Biol Chem       Date:  2018-12-04       Impact factor: 5.157

2.  Aberrant expression of p16INK4a in human cancers - a new biomarker?

Authors:  Kazushi Inoue; Elizabeth A Fry
Journal:  Cancer Rep Rev       Date:  2018-01-15

3.  CBFβ-SMMHC Inhibition Triggers Apoptosis by Disrupting MYC Chromatin Dynamics in Acute Myeloid Leukemia.

Authors:  John Anto Pulikkan; Mahesh Hegde; Hafiz Mohd Ahmad; Houda Belaghzal; Anuradha Illendula; Jun Yu; Kelsey O'Hagan; Jianhong Ou; Carsten Muller-Tidow; Scot A Wolfe; Lihua Julie Zhu; Job Dekker; John Hackett Bushweller; Lucio Hernán Castilla
Journal:  Cell       Date:  2018-06-28       Impact factor: 41.582

Review 4.  Polycomb repressive 2 complex-Molecular mechanisms of function.

Authors:  Valentina L Kouznetsova; Alex Tchekanov; Xiaoming Li; Xiaowen Yan; Igor F Tsigelny
Journal:  Protein Sci       Date:  2019-06-10       Impact factor: 6.725

5.  An Hdac1/Rpd3-Poised Circuit Balances Continual Self-Renewal and Rapid Restriction of Developmental Potential during Asymmetric Stem Cell Division.

Authors:  Derek H Janssens; Danielle C Hamm; Lucas Anhezini; Qi Xiao; Karsten H Siller; Sarah E Siegrist; Melissa M Harrison; Cheng-Yu Lee
Journal:  Dev Cell       Date:  2017-02-27       Impact factor: 12.270

Review 6.  The emerging field of epigenetics in neurodegeneration and neuroprotection.

Authors:  Jee-Yeon Hwang; Kelly A Aromolaran; R Suzanne Zukin
Journal:  Nat Rev Neurosci       Date:  2017-05-18       Impact factor: 34.870

7.  Polycomb Group Gene E(z) Is Required for Spermatogonial Dedifferentiation in Drosophila Adult Testis.

Authors:  Suk Ho Eun; Lijuan Feng; Luis Cedeno-Rosario; Qiang Gan; Gang Wei; Kairong Cui; Keji Zhao; Xin Chen
Journal:  J Mol Biol       Date:  2017-04-21       Impact factor: 5.469

Review 8.  Deregulated Polycomb functions in myeloproliferative neoplasms.

Authors:  Goro Sashida; Motohiko Oshima; Atsushi Iwama
Journal:  Int J Hematol       Date:  2019-01-31       Impact factor: 2.490

Review 9.  H3K27 methylation: a promiscuous repressive chromatin mark.

Authors:  Elizabeth T Wiles; Eric U Selker
Journal:  Curr Opin Genet Dev       Date:  2016-12-08       Impact factor: 5.578

10.  KDM2B Recruitment of the Polycomb Group Complex, PRC1.1, Requires Cooperation between PCGF1 and BCORL1.

Authors:  Sarah J Wong; Micah D Gearhart; Alexander B Taylor; David R Nanyes; Daniel J Ha; Angela K Robinson; Jason A Artigas; Oliver J Lee; Borries Demeler; P John Hart; Vivian J Bardwell; Chongwoo A Kim
Journal:  Structure       Date:  2016-08-25       Impact factor: 5.006

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