Literature DB >> 26413208

Information-Theoretic Characterization of Blood Panel Predictors for Brain Atrophy and Cognitive Decline in the Elderly.

Sarah K Madsen1, Greg Ver Steeg2, Adam Mezher1, Neda Jahanshad1, Talia M Nir1, Xue Hua1, Boris A Gutman1, Aram Galstyan2, Paul M Thompson1.   

Abstract

Cognitive decline in old age is tightly linked with brain atrophy, causing significant burden. It is critical to identify which biomarkers are most predictive of cognitive decline and brain atrophy in the elderly. In 566 older adults from the Alzheimer's Disease Neuroimaging Initiative (ADNI), we used a novel unsupervised machine learning approach to evaluate an extensive list of more than 200 potential brain, blood and cerebrospinal fluid (CSF)-based predictors of cognitive decline. The method, called CorEx, discovers groups of variables with high multivariate mutual information and then constructs latent factors that explain these correlations. The approach produces a hierarchical structure and the predictive power of biological variables and latent factors are compared with regression. We found that a group of variables containing the well-known AD risk gene APOE and CSF tau and amyloid levels were highly correlated. This latent factor was the most predictive of cognitive decline and brain atrophy.

Entities:  

Keywords:  Brain; Cells & molecules; Genes; Machine learning; Magnetic resonance imaging (MRI)

Year:  2015        PMID: 26413208      PMCID: PMC4578218          DOI: 10.1109/ISBI.2015.7164035

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  12 in total

1.  An examination of psychometric properties of the mini-mental state examination and the standardized mini-mental state examination: implications for clinical practice.

Authors:  V C Pangman; J Sloan; L Guse
Journal:  Appl Nurs Res       Date:  2000-11       Impact factor: 2.257

2.  Statistical properties of Jacobian maps and the realization of unbiased large-deformation nonlinear image registration.

Authors:  Alex D Leow; Igor Yanovsky; Ming-Chang Chiang; Agatha D Lee; Andrea D Klunder; Allen Lu; James T Becker; Simon W Davis; Arthur W Toga; Paul M Thompson
Journal:  IEEE Trans Med Imaging       Date:  2007-06       Impact factor: 10.048

Review 3.  Association of apolipoprotein E epsilon 4 allele with sporadic late onset Alzheimer`s disease. A meta-analysis.

Authors:  Saeed Sadigh-Eteghad; Mahnaz Talebi; Mehdi Farhoudi
Journal:  Neurosciences (Riyadh)       Date:  2012-10       Impact factor: 0.906

4.  Plasma phospholipids identify antecedent memory impairment in older adults.

Authors:  Mark Mapstone; Amrita K Cheema; Massimo S Fiandaca; Xiaogang Zhong; Timothy R Mhyre; Linda H MacArthur; William J Hall; Susan G Fisher; Derick R Peterson; James M Haley; Michael D Nazar; Steven A Rich; Dan J Berlau; Carrie B Peltz; Ming T Tan; Claudia H Kawas; Howard J Federoff
Journal:  Nat Med       Date:  2014-03-09       Impact factor: 53.440

Review 5.  Preclinical Alzheimer's disease: diagnosis and prediction of progression.

Authors:  Mei Sian Chong; Suresh Sahadevan
Journal:  Lancet Neurol       Date:  2005-09       Impact factor: 44.182

6.  Regional brain atrophy rate predicts future cognitive decline: 6-year longitudinal MR imaging study of normal aging.

Authors:  Henry Rusinek; Susan De Santi; Dina Frid; Wai-Hon Tsui; Chaim Y Tarshish; Antonio Convit; Mony J de Leon
Journal:  Radiology       Date:  2003-12       Impact factor: 11.105

7.  Unbiased tensor-based morphometry: improved robustness and sample size estimates for Alzheimer's disease clinical trials.

Authors:  Xue Hua; Derrek P Hibar; Christopher R K Ching; Christina P Boyle; Priya Rajagopalan; Boris A Gutman; Alex D Leow; Arthur W Toga; Clifford R Jack; Danielle Harvey; Michael W Weiner; Paul M Thompson
Journal:  Neuroimage       Date:  2012-11-12       Impact factor: 6.556

8.  The Alzheimer's Disease Neuroimaging Initiative (ADNI): MRI methods.

Authors:  Clifford R Jack; Matt A Bernstein; Nick C Fox; Paul Thompson; Gene Alexander; Danielle Harvey; Bret Borowski; Paula J Britson; Jennifer L Whitwell; Chadwick Ward; Anders M Dale; Joel P Felmlee; Jeffrey L Gunter; Derek L G Hill; Ron Killiany; Norbert Schuff; Sabrina Fox-Bosetti; Chen Lin; Colin Studholme; Charles S DeCarli; Gunnar Krueger; Heidi A Ward; Gregory J Metzger; Katherine T Scott; Richard Mallozzi; Daniel Blezek; Joshua Levy; Josef P Debbins; Adam S Fleisher; Marilyn Albert; Robert Green; George Bartzokis; Gary Glover; John Mugler; Michael W Weiner
Journal:  J Magn Reson Imaging       Date:  2008-04       Impact factor: 4.813

9.  Comparison of different MRI brain atrophy rate measures with clinical disease progression in AD.

Authors:  C R Jack; M M Shiung; J L Gunter; P C O'Brien; S D Weigand; D S Knopman; B F Boeve; R J Ivnik; G E Smith; R H Cha; E G Tangalos; R C Petersen
Journal:  Neurology       Date:  2004-02-24       Impact factor: 9.910

10.  Longitudinal stability of MRI for mapping brain change using tensor-based morphometry.

Authors:  Alex D Leow; Andrea D Klunder; Clifford R Jack; Arthur W Toga; Anders M Dale; Matt A Bernstein; Paula J Britson; Jeffrey L Gunter; Chadwick P Ward; Jennifer L Whitwell; Bret J Borowski; Adam S Fleisher; Nick C Fox; Danielle Harvey; John Kornak; Norbert Schuff; Colin Studholme; Gene E Alexander; Michael W Weiner; Paul M Thompson
Journal:  Neuroimage       Date:  2006-02-15       Impact factor: 6.556

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  3 in total

Review 1.  Novel Neuroimaging Methods to Understand How HIV Affects the Brain.

Authors:  Paul M Thompson; Neda Jahanshad
Journal:  Curr HIV/AIDS Rep       Date:  2015-06       Impact factor: 5.071

2.  Comprehensive discovery of subsample gene expression components by information explanation: therapeutic implications in cancer.

Authors:  Shirley Pepke; Greg Ver Steeg
Journal:  BMC Med Genomics       Date:  2017-03-15       Impact factor: 3.063

Review 3.  Concepts and Applications of Information Theory to Immuno-Oncology.

Authors:  Aleksandra Karolak; Sergio Branciamore; Jeannine S McCune; Peter P Lee; Andrei S Rodin; Russell C Rockne
Journal:  Trends Cancer       Date:  2021-02-20
  3 in total

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