Literature DB >> 26412653

Quaternary Structure Analyses of an Essential Oligomeric Enzyme.

Tatiana P Soares da Costa1, Janni B Christensen1, Sebastien Desbois1, Shane E Gordon1, Ruchi Gupta1, Campbell J Hogan1, Tao G Nelson1, Matthew T Downton2, Chamodi K Gardhi3, Belinda M Abbott3, John Wagner2, Santosh Panjikar4, Matthew A Perugini5.   

Abstract

Here, we review recent studies aimed at defining the importance of quaternary structure to a model oligomeric enzyme, dihydrodipicolinate synthase. This will illustrate the complementary and synergistic outcomes of coupling the techniques of analytical ultracentrifugation with enzyme kinetics, in vitro mutagenesis, macromolecular crystallography, small angle X-ray scattering, and molecular dynamics simulations, to demonstrate the role of subunit self-association in facilitating protein dynamics and enzyme function. This multitechnique approach has yielded new insights into the molecular evolution of protein quaternary structure.
© 2015 Elsevier Inc. All rights reserved.

Keywords:  Analytical ultracentrifugation; Dihydrodipicolinate synthase; Molecular dynamics simulations; Oligomer; Quaternary structure; Sedimentation equilibrium; Sedimentation velocity; Self-association; Small angle X-ray scattering; X-ray crystallography

Mesh:

Substances:

Year:  2015        PMID: 26412653     DOI: 10.1016/bs.mie.2015.06.020

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  6 in total

1.  Dimerization of Bacterial Diaminopimelate Decarboxylase Is Essential for Catalysis.

Authors:  Martin G Peverelli; Tatiana P Soares da Costa; Nigel Kirby; Matthew A Perugini
Journal:  J Biol Chem       Date:  2016-02-26       Impact factor: 5.157

Review 2.  Molecular evolution of an oligomeric biocatalyst functioning in lysine biosynthesis.

Authors:  Tatiana P Soares da Costa; Belinda M Abbott; Anthony R Gendall; Santosh Panjikar; Matthew A Perugini
Journal:  Biophys Rev       Date:  2017-12-05

3.  Dynamic Modelling Reveals 'Hotspots' on the Pathway to Enzyme-Substrate Complex Formation.

Authors:  Shane E Gordon; Daniel K Weber; Matthew T Downton; John Wagner; Matthew A Perugini
Journal:  PLoS Comput Biol       Date:  2016-03-11       Impact factor: 4.475

4.  Structure and Function of Cyanobacterial DHDPS and DHDPR.

Authors:  Janni B Christensen; T P Soares da Costa; Pierre Faou; F Grant Pearce; Santosh Panjikar; Matthew A Perugini
Journal:  Sci Rep       Date:  2016-11-15       Impact factor: 4.379

5.  Characterization of recombinant dihydrodipicolinate synthase from the bread wheat Triticum aestivum.

Authors:  Ruchi Gupta; Campbell J Hogan; Matthew A Perugini; Tatiana P Soares da Costa
Journal:  Planta       Date:  2018-05-09       Impact factor: 4.116

6.  Involvement of a dihydrodipicolinate synthase gene (FaDHDPS1) in fungal development, pathogenesis and stress responses in Fusarium asiaticum.

Authors:  Weichao Ren; Jiting Tao; Dongya Shi; Wenchan Chen; Changjun Chen
Journal:  BMC Microbiol       Date:  2018-10-05       Impact factor: 3.605

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.