Literature DB >> 26411640

Complete genome of the marine bacterium Wenzhouxiangella marina KCTC 42284(T).

Sang-Heon Lee1, Hanna Choe2, Byung Kwon Kim3, Arshan Nasir4, Kyung Mo Kim5.   

Abstract

Wenzhouxiangella marina is an obligatory aerobic, Gram-negative, non-motile, rod-shaped bacterium that was isolated from the culture broth of marine microalgae, Picochlorum sp. 122. Here we report the 3.67 MB complete genome (65.26 G+C%) of W. marina KCTC 42284(T) encoding 3,016 protein-coding genes, 43 tRNAs and one rRNA operon. The genomic information supports multiple horizontal gene transfer (HGT) events in the history of W. marina, possibly with other marine bacteria co-existing in marine habitats. Evaluation of genomic signatures revealed 19 such HGT-derived genomic islands. Of these, eight were also supported by "genomic context" that refers to the existence of integrases, transposases and tmRNA genes either inside or in near vicinity to the island. The addition of W. marina genome expands the repertoire of marine bacterial genomic diversity, especially because the strain represents the sole genomic resource of a novel taxonomic family in the bacterial order Chromatiales.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Complete genome; Horizontal gene transfer; Marine bacterium; Wenzhouxiangella marina

Mesh:

Substances:

Year:  2015        PMID: 26411640     DOI: 10.1016/j.margen.2015.09.006

Source DB:  PubMed          Journal:  Mar Genomics        ISSN: 1874-7787            Impact factor:   1.710


  5 in total

1.  An Orphan MbtH-Like Protein Interacts with Multiple Nonribosomal Peptide Synthetases in Myxococcus xanthus DK1622.

Authors:  Karla J Esquilín-Lebrón; Tye O Boynton; Lawrence J Shimkets; Michael G Thomas
Journal:  J Bacteriol       Date:  2018-10-10       Impact factor: 3.490

2.  Hydrogenase Gene Distribution and H2 Consumption Ability within the Thiomicrospira Lineage.

Authors:  Moritz Hansen; Mirjam Perner
Journal:  Front Microbiol       Date:  2016-02-08       Impact factor: 5.640

3.  Complete Genome Sequence of Nitrilotriacetate-Degrading Aminobacter aminovorans KCTC 2477T.

Authors:  Sang-Heon Lee; Hanna Choe; Arshan Nasir; Doo-Sang Park; Kyung Mo Kim
Journal:  Genome Announc       Date:  2016-12-08

4.  Wenzhouxiangella Strain AB-CW3, a Proteolytic Bacterium From Hypersaline Soda Lakes That Preys on Cells of Gram-Positive Bacteria.

Authors:  Dimitry Y Sorokin; Damon Mosier; Jackie K Zorz; Xiaoli Dong; Marc Strous
Journal:  Front Microbiol       Date:  2020-11-13       Impact factor: 5.640

5.  Complete genome of the multidrug-resistant Acinetobacter baumannii strain KBN10P02143 isolated from Korea.

Authors:  Yong-Woon Lee; Hanna Choe; Sang-Heon Lee; Kyung Mo Kim; Sin Kam; Byung Kwon Kim; Won-Kil Lee
Journal:  Mem Inst Oswaldo Cruz       Date:  2016-05-03       Impact factor: 2.743

  5 in total

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