Literature DB >> 26404645

The complete chloroplast genome sequence of Lilium hansonii Leichtlin ex D.D.T.Moore.

Kyunghee Kim1,2, Yoon-Jung Hwang3,4, Sang-Choon Lee1, Tae-Jin Yang1, Ki-Byung Lim4.   

Abstract

Lilium hansonii is a lily species native to Korea and an important wild species for lily breeding. The chloroplast genome of L. hansonii was completed by de novo assembly using the small amount of whole genome sequencing data. The chloroplast genome of L. hansonii was 152 655 bp long and consisted of large single copy region (82 051 bp), small single copy region (17 620 bp) and a pair of inverted repeat regions (26 492 bp). A total of 115 genes were annotated, which included 81 protein-coding genes, 30 tRNA genes and 4 rRNA genes. Phylogenetic analysis with the reported chloroplast genomes revealed that L. hansonii is most closely related to L. superbum (Turk's-cap lily) and L. longiflorum (Easter lily).

Entities:  

Keywords:  Chloroplast; Lilium hansonii, lily; genome sequence

Mesh:

Substances:

Year:  2015        PMID: 26404645     DOI: 10.3109/19401736.2015.1079852

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  7 in total

Review 1.  Biotechnological advances in Lilium.

Authors:  Mehdi Bakhshaie; Solmaz Khosravi; Pejman Azadi; Hedayat Bagheri; Jaap M van Tuyl
Journal:  Plant Cell Rep       Date:  2016-06-18       Impact factor: 4.570

2.  Chloroplast genomes of Lilium lancifolium, L. amabile, L. callosum, and L. philadelphicum: Molecular characterization and their use in phylogenetic analysis in the genus Lilium and other allied genera in the order Liliales.

Authors:  Jong-Hwa Kim; Sung-Il Lee; Bo-Ram Kim; Ik-Young Choi; Peter Ryser; Nam-Soo Kim
Journal:  PLoS One       Date:  2017-10-24       Impact factor: 3.240

3.  Characterization and Comparison of Two Complete Plastomes of Rosaceae Species (Potentilla dickinsii var. glabrata and Spiraea insularis) Endemic to Ulleung Island, Korea.

Authors:  JiYoung Yang; Gi-Ho Kang; Jae-Hong Pak; Seung-Chul Kim
Journal:  Int J Mol Sci       Date:  2020-07-13       Impact factor: 5.923

4.  The complete chloroplast genome sequence of Lilium tsingtauense Gilg (sect. Martagon, Liliaceae).

Authors:  Ji Hee Song; Chang Young Yoon; Hoang Dang Khoa Do; Woong Bin Lee; Joo-Hwan Kim
Journal:  Mitochondrial DNA B Resour       Date:  2016-04-18       Impact factor: 0.658

5.  The complete chloroplast genomes of Lilium tsingtauense Gilg (Liliaceae).

Authors:  Sang-Choon Lee; Kyunghee Kim; Yoon-Jung Hwang; Ki-Byung Lim; Tae-Jin Yang
Journal:  Mitochondrial DNA B Resour       Date:  2016-04-19       Impact factor: 0.658

6.  Complete chloroplast genome sequences of Lilium: insights into evolutionary dynamics and phylogenetic analyses.

Authors:  Yun-Peng Du; Yu Bi; Feng-Ping Yang; Ming-Fang Zhang; Xu-Qing Chen; Jing Xue; Xiu-Hai Zhang
Journal:  Sci Rep       Date:  2017-07-18       Impact factor: 4.379

7.  The Chloroplast Genome of Lilium henrici: Genome Structure and Comparative Analysis.

Authors:  Hai-Ying Liu; Yan Yu; Yi-Qi Deng; Juan Li; Zi-Xuan Huang; Song-Dong Zhou
Journal:  Molecules       Date:  2018-05-26       Impact factor: 4.411

  7 in total

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