| Literature DB >> 26404214 |
Bach Tai Dang1, Caroline Rouger2, Marc Litaudon3, Pascal Richomme4, Denis Séraphin5, Séverine Derbré6.
Abstract
Through dereplication analysis, seven known Mammea coumarins were identified in a fraction obtained from Mammea neurophylla dichloromethane bark extract selected for its ability to prevent advanced glycation end-product (AGE) formation. Among them, a careful examination of the NMR dataset of pedilanthocoumarin B led to a structural revision. Inspection of LC-DAD-MS(n) chromatograms allowed us to predict the presence of four new compounds, which were further isolated. Using spectroscopic methods (¹H-, (13)C- and 2D-NMR, HRMS, UV), these compounds were identified as new benzoyl substituted 4-phenylcoumarins (iso-pedilanthocoumarin B and neurophyllol C) and 4-(1-acetoxypropyl)coumarins cyclo F (ochrocarpins H and I).Entities:
Keywords: 4-(1-acetoxypropyl)coumarins; 4-phenylcoumarins; Calophyllaceae; benzoylcoumarins; dereplication analysis
Mesh:
Substances:
Year: 2015 PMID: 26404214 PMCID: PMC6332034 DOI: 10.3390/molecules201017735
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Retention time, (tR), UV spectrum, HRMS and ESI-MSn data for peaks identified in Fraction VIII from dichloromethane (DCM) bark extract.
| Peak | UV λmax (nm) | (+)-ESI-MS | (+)-ESI-MS2
| (−)-ESI-MS | (−)-ESI-MS2
| Hypothetical Molecular Mass (g·mol−1) | Hypothetical Structure 1 | |
|---|---|---|---|---|---|---|---|---|
| 8.1 | 11.0 | 222, 299 | 447 [M + H]+
| 429/405/387/375/369/361/351/343/315 | 445 [M − H]− | 385/327 | 446 | Ochrocarpin F ( |
| 8.2 | 12.4 | 222, 299 | 447 [M + H]+ | 429/405/387/369/361/351/343/315 | 445 [M − H]− | 385/327 | 446 | New product: ochrocarpin H ( |
| 8.3 | 13.0 | 255, 298 | 425 [M − H2O + H]+ | 407/347 | 441 [M − H]− | 423/369 | 442 | New product: neurophyllol C ( |
| 8.4 | 14.3 | 222, 299 | 447 [M + H]+
| 429/405/387/375/369/361/351/343/315 | 445 [M − H]− | 385/327 | 446 | Ochrocarpin G ( |
| 8.5 | 15.9 | 222, 298 | 447 [M + H]+ | 429/405/387/375/369/361/351/343/315 | 445 [M − H]− | 385/327 | 446 | New product: ochrocarpin I ( |
| 8.6 | 18.9 | 255, 313 | 427 [M + H]+ | 371 | 425 [M − H]− | 347 | 426 | New product: Iso-pedilanthocoumarin B ( |
| 8.7 | 20.1 | 256, 301 | 427 [M + H]+ | 371 | 425 [M − H]− | 347 | 426 | Pedilanthocoumarin B ( |
| 8.8 | 26.6 | 222, 295, 330 | 429 [M + H − H2O]+
| 387/369/351/343 | 445 [M − H]− | 385 | 446 | Neurophyllol B ( |
| 8.9 | 28.2 | 222, 295, 330 | 429 [M + H − H2O]+
| 387/369/343 | 445 [M − H]− | 385 | 446 | Neurophyllol A ( |
| 8.10 | 33.9 | 222, 295, 335 | 431 [M + H]+
| 389/371/315 | 429 [M − H]− | 369 | 430 | Mammea E/BB ( |
| 8.11 | 35.7 | 222, 295, 335 | 431 [M + H]+
| 389/371/315 | 429 [M − H]− | 369 | 430 | Mammea E/BA ( |
1 These structures were confirmed after purification and NMR experiments; * structure previously known as pedilanthocoumarin B.
Figure 1Structure of known coumarins 1 to 6 and 12 isolated from Mammea neurophylla bark.
Figure 2Structure of new or revised coumarins 7 to 11 isolated from Mammea neurophylla bark. * Revised structure of pedilanthocoumarin B.
1H- (500 MHz, CDCl3) and 13C-NMR (125 MHz, CDCl3) data for pedilanthocoumarin B (7), iso-pedilanthocoumarin B (8) and neurophyllols C (9).
| Position | Pedilanthocoumarin B (7) | Neurophyllol C (9) | Position | Iso-pedilanthocoumarin B (8) | |||
|---|---|---|---|---|---|---|---|
| δC | δH ( | δC | δH ( | δC | δH ( | ||
| 2 | 159.7 | 159.9 | 2 | 158.1 b | |||
| 3 | 113.3 | 6.01, s | 112.7 | 6.01, s | 3 | 113.0 | 5.89, s |
| 4 | 154.6 | 156.3 | 4 | 152.2 b | |||
| 4a | 101.6 | 102.3 | 4a | 100.8 b | |||
| 5 | 157.4 | 160.5 | 5 | 157.3 b | |||
| 6 | 107.3 | 108.2 | 6 | 112.3 b | |||
| 7 | 160.9 | 161.1 | 7 | 164.4 b | |||
| 8 | 109.2 | 105.6 | 8 | 104.3 b | |||
| 8a | 157.4 | 157.8 | 8a | nd | |||
| 1′ | 137.6 | 139.1 a | 1′ | 136.5 b | |||
| 2′, 6′ | 127.5 | 7.37, m | 127.4 | 7.36, m | 2′, 6′ | 127.7 | 7.44, m |
| 3′, 5′ | 129.0 a | 7.44, m | 128.0 a | 7.43, m | 3′, 5′ | 129.8 | 7.57, m |
| 4′ | 129.7 | 7.44, m | 128.6 | 7.43, m | 4′ | 130.4 b | 7.44, m |
| 1″ | 199.1 | 200.0 | 1″ | 21.9 | 3.35, d (7.0) | ||
| 2″ | 139.8 | 140.7 a | 2″ | 120.9 | 5.16, t (7.0) | ||
| 3″, 7″ | 128.6 | 7.63, m | 128.6 | 7.64, m | 3″ | 134.2 b | |
| 4″, 6″ | 128.6 a | 7.44, m | 128.1 a | 7.41, m | 4″ | 18.0 | 1.73, s |
| 5″ | 132.9 | 7.56, m | 132.2 | 7.52, m | 5″ | 25.9 | 1.68, s |
| 1‴ | 22.0 | 3.56, d (7.0) | 28.7 | 3.07, dd, (15.0, 8.0) | 1‴ | 199.1 b | |
| 2‴ | 120.8 | 5.27, td (7.0, 1.5) | 76.7 | 4.48, dd (8.0, 2.5) | 2‴ | 140.5 b | |
| 3‴ | 134.8 | 146.2 | 3‴, 7‴ | 128.4 | 7.66, m | ||
| 4‴ | 18.2 | 1.84, s | 111.1 | 4.91, s | 4‴, 6‴ | 127.7 | 7.48, m |
| 5‴ | 26.0 | 1.71, s | 18.9 | 1.90, s | 5‴ | 132.5 | 7.59, m |
| 5-OH | 8.60, s | 11.69, s | 5-OH | 6.00, s | |||
| 7-OH | 9.05, s | 9.57, s | 7-OH | 12.34, s | |||
a Interchangeable; b chemical shifts deduced from the HMBC spectrum; nd not determined.
Figure 3Selected HMBC correlations for iso-pedilanthocoumarin B (8).
1H- (500 MHz, CDCl3) and 13C-NMR (125 MHz, CDCl3) data for ochrocarpin H (10) and ochrocarpin I (11).
| Position | Ochrocarpin H (10) | Ochrocarpin I (11) | ||
|---|---|---|---|---|
| δC, Type | δH ( | δC, Type | δH ( | |
| 2 | 159.5 | 159.6 | ||
| 3 | 106.2 | 6.22, s | 106.6 | 6.24, s |
| 4 | 156.1 | 156.3 | ||
| 4a | 97.3 | 97.4 | ||
| 5 | 163.5 | 163.6 | ||
| 6 | 105.1 | 105.4 | ||
| 6a | 161.5 | 161.6 | ||
| 8 | 93.3 | 4.93, t (9.0) | 93.3 | 4.91, t (9.0) |
| 9 | 26.9 | 3.17, m | 26.7 | 3.19, d (9.0) |
| 10 | 110.3 | 110.5 | ||
| 10a | 157.6 | 157.5 | ||
| 1′ | 72.7 | 6.30, dd (8.0, 3.5) | 72.6 | 6.48, dd (8.5, 3.5) |
| 2′ | 28.3 | 1.74, m | 28.8 | 1.75, m |
| 3′ | 9.9 | 1.04, m | 10.3 | 1.01, t (7.5) |
| OCO | 21.1 | 2.17, s | 21.1 | 2.15, s |
| O | 170.3 | 170.8 | ||
| 1″ | 205.9 | 206.2 | ||
| 2″ | 53.6 | 3.12, d (6.5) | 53.6 | 3.12, d (6.5) |
| 3″ | 25.7 | 2.26, m | 25.7 | 2.26, m |
| 4″ | 22.8 | 1.03, d (6.5) | 22.8 | 1.04, m |
| 5″ | 22.8 | 1.03, d (6.5) | 22.8 | 1.04, m |
| 1‴ | 71.5 | 71.8 | ||
| 2‴ | 25.0 | 1.29, s | 24.3 | 1.26, s |
| 3‴ | 26.2 | 1.38, s | 26.4 | 1.39, s |
| 5-OH | 14.23, s | 14.25, s | ||