Literature DB >> 26403336

Complete sequence and analysis of plastid genomes of Pseudo-nitzschia multiseries (Bacillariophyta).

Min Cao1, Xiao-Long Yuan1, Guiqi Bi1.   

Abstract

Pseudo-nitzschia multiseries are common members of phytoplankton communities, which can bring about blooms in coastal and ocean. Meanwhile, the neurotoxin was produced by this species can cause amnesic shellfish poisoning in both marine mammals and human beings. Whereas the lacking of plastid genome information on this species obstacles the study of its evolutionary position. Here, the complete plastid genome sequence of Pseudo-nitzschia multiseries is presented. The genome is a circular DNA composed 111 539 bp of with one rRNA operon. The average G + C content of this plastid genome is 31.37%. This genome includes 96 protein coding genes (containing four unidentified open reading frames), 27 transfer RNA genes, three ribosomal RNA genes, and one tRMA. The comparison between P. multiseries and Thalassiosira pseudonana has a high similarity in gene content and structure. In addition, our phylogenetic result suggests that the P. multiseries is the sister group of T. pseudonana.

Entities:  

Keywords:  Bacillariophyta; Pseudo-nitzschia multiseries; plastid genome

Mesh:

Year:  2015        PMID: 26403336     DOI: 10.3109/19401736.2015.1060428

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  3 in total

1.  Comparative analysis of Thalassionema chloroplast genomes revealed hidden biodiversity.

Authors:  Mengjia Zhang; Nansheng Chen
Journal:  BMC Genomics       Date:  2022-04-27       Impact factor: 4.547

2.  Highly Reduced Plastid Genomes of the Non-photosynthetic Dictyochophyceans Pteridomonas spp. (Ochrophyta, SAR) Are Retained for tRNA-Glu-Based Organellar Heme Biosynthesis.

Authors:  Motoki Kayama; Kacper Maciszewski; Akinori Yabuki; Hideaki Miyashita; Anna Karnkowska; Ryoma Kamikawa
Journal:  Front Plant Sci       Date:  2020-11-27       Impact factor: 5.753

3.  Comparative Analysis of Bacillariophyceae Chloroplast Genomes Uncovers Extensive Genome Rearrangements Associated with Speciation.

Authors:  Yichao Wang; Jing Wang; Yang Chen; Shuya Liu; Yongfang Zhao; Nansheng Chen
Journal:  Int J Environ Res Public Health       Date:  2022-08-14       Impact factor: 4.614

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.