Literature DB >> 26396910

Crystal structure of 1-{(E)-[(3,4-di-chloro-phen-yl)imino]-meth-yl}naphthalen-2-ol.

Muhammad Nawaz Tahir1, Muhammad Anwar-Ul-Haq1, Hazoor Ahmad Shad2.   

Abstract

In the title compound, C17H11Cl2NO, the dihedral angle between the planes of the naphthalene ring system and the benzene ring is 28.88 (11)°. The main twist in the mol-ecule occurs about the N-Cb (b = benzene ring) bond, as indicated by the C=N-Cb-Cb torsion angle of 31.0 (4)°. An intra-molecular O-H⋯N hydrogen bond closes an S(6) ring. In the crystal, inversion dimers linked by pairs of very weak C-H⋯O inter-actions generate R 2 (2)(16) loops.

Entities:  

Keywords:  crystal structure; hydrogen bonding; inversion dimers; naphthalen-2-ol

Year:  2015        PMID: 26396910      PMCID: PMC4555428          DOI: 10.1107/S2056989015015959

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For related structures, see: Elmali et al. (1998 ▸); Pavlovic et al. (2002 ▸); Pierens et al. (2012 ▸); Yıldız et al. (2006 ▸); Wang et al. (2011 ▸).

Experimental

Crystal data

C17H11Cl2NO M = 316.17 Monoclinic, a = 27.075 (4) Å b = 3.9284 (6) Å c = 26.359 (4) Å β = 95.287 (9)° V = 2791.7 (8) Å3 Z = 8 Mo Kα radiation μ = 0.46 mm−1 T = 296 K 0.45 × 0.22 × 0.18 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▸) T min = 0.823, T max = 0.928 10968 measured reflections 3006 independent reflections 1624 reflections with I > 2σ(I) R int = 0.052

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.113 S = 1.02 3006 reflections 191 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.29 e Å−3

Data collection: APEX2 (Bruker, 2007 ▸); cell refinement: SAINT (Bruker, 2007 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015 ▸); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▸) and PLATON (Spek, 2009 ▸); software used to prepare material for publication: WinGX (Farrugia, 2012 ▸) and PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015015959/hb7492sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015015959/hb7492Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015015959/hb7492Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015015959/hb7492fig1.tif View of the title compound with displacement ellipsoids drawn at the 50% probability level. The dotted line indicates the intra­molecular H-bond inter­action. Click here for additional data file. . DOI: 10.1107/S2056989015015959/hb7492fig2.tif Inversion dimers in the crystal of the title compound. CCDC reference: 1420675 Additional supporting information: crystallographic information; 3D view; checkCIF report
C17H11Cl2NOF(000) = 1296
Mr = 316.17Dx = 1.502 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
a = 27.075 (4) ÅCell parameters from 1624 reflections
b = 3.9284 (6) Åθ = 2.3–27.0°
c = 26.359 (4) ŵ = 0.46 mm1
β = 95.287 (9)°T = 296 K
V = 2791.7 (8) Å3Needle, yellow
Z = 80.45 × 0.22 × 0.18 mm
Bruker Kappa APEXII CCD diffractometer3006 independent reflections
Radiation source: fine-focus sealed tube1624 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.052
Detector resolution: 7.70 pixels mm-1θmax = 27.0°, θmin = 2.3°
ω scansh = −34→34
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −3→5
Tmin = 0.823, Tmax = 0.928l = −33→24
10968 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.113H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.041P)2 + 0.8217P] where P = (Fo2 + 2Fc2)/3
3006 reflections(Δ/σ)max < 0.001
191 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1−0.01545 (2)0.1563 (2)−0.07226 (3)0.0583 (3)
Cl20.03878 (3)−0.1601 (2)−0.16134 (3)0.0657 (3)
O10.23523 (6)0.7303 (6)0.05438 (8)0.0661 (6)
H10.21670.62980.03310.099*
N10.15606 (7)0.4249 (6)0.01785 (9)0.0480 (6)
C10.21559 (9)0.7303 (7)0.09872 (11)0.0473 (7)
C20.24423 (10)0.8780 (8)0.14042 (12)0.0550 (8)
H20.27530.96680.13590.066*
C30.22719 (10)0.8919 (7)0.18642 (12)0.0514 (8)
H30.24670.99290.21320.062*
C40.18026 (9)0.7570 (7)0.19561 (10)0.0434 (7)
C50.16273 (10)0.7752 (7)0.24400 (11)0.0510 (8)
H50.18230.87890.27050.061*
C60.11812 (11)0.6459 (8)0.25307 (11)0.0568 (8)
H60.10710.66050.28540.068*
C70.08905 (10)0.4908 (8)0.21345 (11)0.0555 (8)
H70.05840.39980.21950.067*
C80.10470 (9)0.4700 (7)0.16588 (11)0.0465 (7)
H80.08440.36580.14010.056*
C90.15082 (8)0.6018 (6)0.15477 (10)0.0380 (7)
C100.16918 (9)0.5897 (7)0.10521 (10)0.0407 (7)
C110.14109 (9)0.4337 (7)0.06279 (11)0.0446 (7)
H110.11080.33460.06790.053*
C120.12664 (9)0.2802 (7)−0.02362 (10)0.0427 (7)
C130.07522 (9)0.2847 (6)−0.02738 (10)0.0396 (6)
H130.05870.3810−0.00150.047*
C140.04871 (9)0.1476 (7)−0.06919 (10)0.0390 (6)
C150.07202 (10)0.0081 (7)−0.10842 (10)0.0438 (7)
C160.12334 (10)0.0042 (8)−0.10466 (11)0.0516 (8)
H160.1397−0.0916−0.13070.062*
C170.15025 (10)0.1399 (8)−0.06306 (11)0.0518 (8)
H170.18470.1378−0.06120.062*
U11U22U33U12U13U23
Cl10.0427 (4)0.0719 (6)0.0601 (5)0.0001 (4)0.0043 (3)−0.0098 (4)
Cl20.0811 (5)0.0691 (6)0.0472 (5)−0.0065 (4)0.0076 (4)−0.0140 (4)
O10.0435 (11)0.0918 (19)0.0632 (14)−0.0072 (11)0.0063 (10)0.0031 (13)
N10.0398 (12)0.0571 (17)0.0472 (15)0.0038 (11)0.0049 (11)0.0025 (13)
C10.0393 (15)0.049 (2)0.0532 (19)0.0037 (13)0.0036 (13)0.0074 (15)
C20.0361 (15)0.057 (2)0.071 (2)−0.0060 (13)−0.0020 (15)0.0009 (18)
C30.0463 (16)0.045 (2)0.060 (2)−0.0006 (14)−0.0104 (14)0.0006 (16)
C40.0414 (15)0.0388 (18)0.0484 (18)0.0069 (13)−0.0041 (13)0.0052 (14)
C50.0538 (17)0.047 (2)0.0503 (19)0.0084 (14)−0.0075 (14)−0.0064 (15)
C60.0611 (19)0.060 (2)0.0496 (19)0.0070 (16)0.0051 (15)−0.0012 (17)
C70.0479 (17)0.066 (2)0.053 (2)−0.0032 (15)0.0066 (14)0.0050 (18)
C80.0422 (15)0.0476 (19)0.0476 (18)−0.0022 (13)−0.0066 (12)0.0022 (15)
C90.0345 (13)0.0361 (17)0.0421 (16)0.0040 (12)−0.0038 (11)0.0055 (13)
C100.0354 (14)0.0375 (17)0.0479 (17)0.0024 (12)−0.0036 (12)0.0062 (14)
C110.0390 (14)0.0464 (19)0.0481 (18)0.0039 (13)0.0025 (13)0.0075 (15)
C120.0441 (15)0.0440 (18)0.0403 (16)0.0047 (13)0.0052 (12)0.0048 (14)
C130.0406 (14)0.0441 (17)0.0350 (15)0.0064 (13)0.0089 (11)0.0011 (14)
C140.0418 (14)0.0368 (17)0.0393 (16)0.0030 (12)0.0083 (12)0.0059 (14)
C150.0564 (17)0.0380 (17)0.0376 (16)0.0009 (14)0.0070 (13)0.0036 (14)
C160.0600 (19)0.054 (2)0.0432 (17)0.0122 (15)0.0178 (14)−0.0008 (16)
C170.0416 (15)0.065 (2)0.0500 (18)0.0084 (15)0.0118 (14)0.0066 (17)
Cl1—C141.732 (2)C6—H60.9300
Cl2—C151.721 (3)C7—C81.363 (4)
O1—C11.328 (3)C7—H70.9300
O1—H10.8200C8—C91.407 (3)
N1—C111.287 (3)C8—H80.9300
N1—C121.411 (3)C9—C101.441 (3)
C1—C101.397 (3)C10—C111.431 (3)
C1—C21.410 (4)C11—H110.9300
C2—C31.338 (4)C12—C171.384 (4)
C2—H20.9300C12—C131.387 (3)
C3—C41.418 (4)C13—C141.369 (3)
C3—H30.9300C13—H130.9300
C4—C51.403 (4)C14—C151.374 (3)
C4—C91.417 (3)C15—C161.384 (4)
C5—C61.352 (4)C16—C171.367 (4)
C5—H50.9300C16—H160.9300
C6—C71.389 (4)C17—H170.9300
C1—O1—H1109.5C8—C9—C10124.3 (2)
C11—N1—C12121.4 (2)C4—C9—C10119.1 (2)
O1—C1—C10123.0 (3)C1—C10—C11119.5 (3)
O1—C1—C2116.7 (2)C1—C10—C9119.2 (2)
C10—C1—C2120.2 (3)C11—C10—C9121.3 (2)
C3—C2—C1120.8 (3)N1—C11—C10122.7 (2)
C3—C2—H2119.6N1—C11—H11118.6
C1—C2—H2119.6C10—C11—H11118.6
C2—C3—C4121.9 (3)C17—C12—C13118.8 (2)
C2—C3—H3119.0C17—C12—N1118.4 (2)
C4—C3—H3119.0C13—C12—N1122.8 (2)
C5—C4—C9119.9 (2)C14—C13—C12120.1 (2)
C5—C4—C3121.3 (3)C14—C13—H13120.0
C9—C4—C3118.8 (3)C12—C13—H13120.0
C6—C5—C4121.6 (3)C13—C14—C15121.3 (2)
C6—C5—H5119.2C13—C14—Cl1118.6 (2)
C4—C5—H5119.2C15—C14—Cl1120.1 (2)
C5—C6—C7119.1 (3)C14—C15—C16118.6 (2)
C5—C6—H6120.5C14—C15—Cl2121.4 (2)
C7—C6—H6120.5C16—C15—Cl2120.0 (2)
C8—C7—C6121.0 (3)C17—C16—C15120.7 (3)
C8—C7—H7119.5C17—C16—H16119.7
C6—C7—H7119.5C15—C16—H16119.7
C7—C8—C9121.8 (3)C16—C17—C12120.6 (2)
C7—C8—H8119.1C16—C17—H17119.7
C9—C8—H8119.1C12—C17—H17119.7
C8—C9—C4116.6 (2)
O1—C1—C2—C3179.4 (3)C4—C9—C10—C10.2 (4)
C10—C1—C2—C3−1.3 (4)C8—C9—C10—C11−0.8 (4)
C1—C2—C3—C40.7 (4)C4—C9—C10—C11179.5 (2)
C2—C3—C4—C5−179.6 (3)C12—N1—C11—C10−177.6 (2)
C2—C3—C4—C90.3 (4)C1—C10—C11—N1−2.1 (4)
C9—C4—C5—C60.4 (4)C9—C10—C11—N1178.6 (2)
C3—C4—C5—C6−179.7 (3)C11—N1—C12—C17−151.6 (3)
C4—C5—C6—C70.1 (4)C11—N1—C12—C1331.0 (4)
C5—C6—C7—C8−0.5 (4)C17—C12—C13—C140.9 (4)
C6—C7—C8—C90.3 (4)N1—C12—C13—C14178.4 (2)
C7—C8—C9—C40.1 (4)C12—C13—C14—C15−1.0 (4)
C7—C8—C9—C10−179.5 (3)C12—C13—C14—Cl1179.7 (2)
C5—C4—C9—C8−0.5 (4)C13—C14—C15—C160.9 (4)
C3—C4—C9—C8179.6 (2)Cl1—C14—C15—C16−179.8 (2)
C5—C4—C9—C10179.2 (2)C13—C14—C15—Cl2−179.3 (2)
C3—C4—C9—C10−0.7 (4)Cl1—C14—C15—Cl20.1 (3)
O1—C1—C10—C110.7 (4)C14—C15—C16—C17−0.7 (4)
C2—C1—C10—C11−178.5 (3)Cl2—C15—C16—C17179.4 (2)
O1—C1—C10—C9−179.9 (2)C15—C16—C17—C120.8 (5)
C2—C1—C10—C90.8 (4)C13—C12—C17—C16−0.8 (4)
C8—C9—C10—C1179.8 (2)N1—C12—C17—C16−178.4 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.821.842.565 (3)147
C17—H17···O1i0.932.603.413 (3)147
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
O1H1N10.821.842.565(3)147
C17H17O1i 0.932.603.413(3)147

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (E)-1-[(2-Chloro-4-nitro-phenyl-imino)-meth-yl]naphthalen-2-ol.

Authors:  Juangang Wang; Jun Zhang; Peipei Yang; Tiedan Chen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-11

3.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

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