Literature DB >> 26396902

Crystal structure of fenbuconazole.

Gihaeng Kang1, Jineun Kim1, Hyunjin Park1, Tae Ho Kim1.   

Abstract

In the title compound, C19H17ClN4 [systematic name: (RS)-4-(4-chloro-phen-yl)-2-phenyl-2-(1H-1,2,4-triazol-1-ylmeth-yl)butyro-nitrile], which is the conazole fungicide fenbuconazole, the dihedral angles between the planes of the central benzene and the terminal chloro-phenyl and triazole rings are 32.77 (5) and 32.97 (5)°, respectively. The C-C-C-C linkage between the tertiary C atom and the benzene ring has an anti orientation [torsion angle = 174.47 (12)°]. In the crystal, C-H⋯N hydrogen bonds and very weak C-Cl⋯π inter-actions [Cl⋯π = 3.7892 (9) Å] link adjacent mol-ecules, forming two-dimensional networks lying parellel to the (101) plane. The planes are linked by weak π-π inter-actions [centroid-centroid separation = 3.8597 (9) Å], resulting in a three-dimensional architecture.

Entities:  

Keywords:  C—Cl⋯π inter­actions; crystal structure; fenbuconazole; fungicide; π–π inter­actions

Year:  2015        PMID: 26396902      PMCID: PMC4555419          DOI: 10.1107/S205698901501542X

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For information on the fungicidal properties of the title compound, see: Li et al. (2012 ▸). For related crystal structures, see: Rizzoli et al. (2009 ▸); Yin et al. (2014 ▸).

Experimental

Crystal data

C19H17ClN4 M = 336.82 Monoclinic, a = 12.4606 (3) Å b = 6.7404 (2) Å c = 20.5394 (5) Å β = 95.455 (2)° V = 1717.28 (8) Å3 Z = 4 Mo Kα radiation μ = 0.23 mm−1 T = 173 K 0.18 × 0.07 × 0.03 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2013 ▸) T min = 0.959, T max = 0.993 15784 measured reflections 3936 independent reflections 3044 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.108 S = 1.04 3936 reflections 217 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.30 e Å−3

Data collection: APEX2 (Bruker, 2013 ▸); cell refinement: SAINT (Bruker, 2013 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2015 ▸); molecular graphics: DIAMOND (Brandenburg, 2010 ▸); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▸). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S205698901501542X/hb7481sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S205698901501542X/hb7481Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S205698901501542X/hb7481Isup3.cml Click here for additional data file. . DOI: 10.1107/S205698901501542X/hb7481fig1.tif The asymmetric unit of the title compound with displacement ellipsoids drawn at the 50% probability level. Click here for additional data file. b . DOI: 10.1107/S205698901501542X/hb7481fig2.tif Crystal packing viewed along the b axis. The inter­molecular inter­actions are shown as dashed lines. CCDC reference: 1419334 Additional supporting information: crystallographic information; 3D view; checkCIF report
C19H17ClN4F(000) = 704
Mr = 336.82Dx = 1.303 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 12.4606 (3) ÅCell parameters from 3787 reflections
b = 6.7404 (2) Åθ = 3.2–27.4°
c = 20.5394 (5) ŵ = 0.23 mm1
β = 95.455 (2)°T = 173 K
V = 1717.28 (8) Å3Plate, brown
Z = 40.18 × 0.07 × 0.03 mm
Bruker APEXII CCD diffractometer3044 reflections with I > 2σ(I)
φ and ω scansRint = 0.035
Absorption correction: multi-scan (SADABS; Bruker, 2013)θmax = 27.5°, θmin = 1.8°
Tmin = 0.959, Tmax = 0.993h = −15→16
15784 measured reflectionsk = −8→8
3936 independent reflectionsl = −26→26
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.044H-atom parameters constrained
wR(F2) = 0.108w = 1/[σ2(Fo2) + (0.043P)2 + 0.4967P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
3936 reflectionsΔρmax = 0.25 e Å3
217 parametersΔρmin = −0.30 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
Cl10.02411 (4)0.19334 (10)1.12090 (3)0.0689 (2)
N10.42210 (11)1.1422 (2)0.92410 (6)0.0367 (3)
N20.63664 (9)0.7989 (2)0.86689 (5)0.0277 (3)
N30.66105 (11)0.9948 (2)0.87314 (6)0.0398 (3)
N40.71532 (12)0.8721 (2)0.77946 (7)0.0445 (4)
C10.17939 (13)0.3822 (3)0.97206 (8)0.0384 (4)
H10.20050.32860.93250.046*
C20.12369 (14)0.2639 (3)1.01229 (9)0.0447 (4)
H20.10560.13111.00030.054*
C30.09501 (12)0.3415 (3)1.06994 (8)0.0410 (4)
C40.12079 (14)0.5320 (3)1.08810 (8)0.0485 (5)
H40.10140.58331.12840.058*
C50.17565 (13)0.6493 (3)1.04672 (8)0.0398 (4)
H50.19330.78221.05890.048*
C60.20501 (10)0.5763 (2)0.98807 (7)0.0278 (3)
C70.26520 (11)0.7035 (3)0.94298 (7)0.0316 (3)
H7A0.25590.84510.95410.038*
H7B0.23410.68310.89730.038*
C80.38533 (11)0.6541 (2)0.94830 (6)0.0237 (3)
H8A0.39370.50960.94180.028*
H8B0.41710.68640.99310.028*
C90.44939 (10)0.7655 (2)0.89855 (6)0.0218 (3)
C100.41229 (10)0.7205 (2)0.82676 (6)0.0229 (3)
C110.38360 (12)0.5284 (2)0.80795 (7)0.0312 (3)
H110.38070.42800.84020.037*
C120.35906 (13)0.4822 (3)0.74246 (7)0.0364 (4)
H120.33900.35060.73010.044*
C130.36370 (13)0.6264 (3)0.69533 (7)0.0369 (4)
H130.34670.59430.65050.044*
C140.39293 (13)0.8170 (3)0.71325 (7)0.0361 (4)
H140.39680.91620.68070.043*
C150.41687 (12)0.8646 (2)0.77900 (6)0.0297 (3)
H150.43640.99670.79120.036*
C160.43710 (11)0.9796 (2)0.91178 (6)0.0257 (3)
C170.56995 (11)0.7062 (2)0.91202 (6)0.0255 (3)
H17A0.59630.74500.95720.031*
H17B0.57650.56030.90860.031*
C180.70813 (15)1.0295 (3)0.81948 (8)0.0472 (5)
H180.73521.15670.80960.057*
C190.66923 (13)0.7306 (3)0.81087 (7)0.0357 (4)
H190.66030.59790.79580.043*
U11U22U33U12U13U23
Cl10.0454 (3)0.0820 (4)0.0822 (4)−0.0076 (3)0.0220 (2)0.0428 (3)
N10.0555 (8)0.0248 (8)0.0306 (7)0.0036 (7)0.0081 (6)0.0001 (6)
N20.0283 (6)0.0304 (7)0.0253 (6)−0.0013 (5)0.0069 (5)0.0004 (5)
N30.0489 (8)0.0351 (8)0.0384 (7)−0.0131 (7)0.0195 (6)−0.0055 (6)
N40.0514 (8)0.0463 (10)0.0397 (7)−0.0003 (7)0.0240 (6)0.0004 (7)
C10.0448 (9)0.0389 (10)0.0317 (8)−0.0065 (8)0.0057 (6)−0.0035 (7)
C20.0441 (9)0.0366 (10)0.0529 (10)−0.0123 (8)0.0020 (8)0.0032 (8)
C30.0275 (7)0.0508 (12)0.0455 (9)−0.0038 (8)0.0086 (6)0.0185 (8)
C40.0521 (10)0.0585 (13)0.0388 (9)−0.0014 (10)0.0241 (8)0.0008 (9)
C50.0474 (9)0.0360 (10)0.0382 (8)−0.0064 (8)0.0164 (7)−0.0052 (7)
C60.0231 (6)0.0334 (9)0.0271 (7)0.0002 (6)0.0036 (5)0.0036 (6)
C70.0317 (7)0.0344 (9)0.0297 (7)0.0026 (7)0.0084 (6)0.0068 (7)
C80.0299 (7)0.0226 (8)0.0193 (6)−0.0001 (6)0.0054 (5)0.0023 (6)
C90.0274 (6)0.0185 (7)0.0200 (6)0.0006 (6)0.0053 (5)0.0021 (5)
C100.0243 (6)0.0246 (8)0.0202 (6)0.0026 (6)0.0046 (5)0.0004 (6)
C110.0427 (8)0.0269 (9)0.0245 (7)0.0000 (7)0.0055 (6)0.0024 (6)
C120.0482 (9)0.0306 (9)0.0302 (8)0.0004 (8)0.0024 (6)−0.0069 (7)
C130.0427 (8)0.0468 (11)0.0208 (7)0.0091 (8)0.0014 (6)−0.0042 (7)
C140.0465 (9)0.0397 (10)0.0223 (7)0.0063 (8)0.0045 (6)0.0075 (7)
C150.0385 (8)0.0267 (9)0.0242 (7)0.0014 (7)0.0036 (6)0.0038 (6)
C160.0334 (7)0.0257 (9)0.0186 (6)−0.0012 (7)0.0053 (5)0.0032 (6)
C170.0288 (7)0.0262 (8)0.0220 (6)0.0010 (6)0.0048 (5)0.0036 (6)
C180.0574 (11)0.0420 (11)0.0467 (9)−0.0119 (9)0.0284 (8)−0.0007 (8)
C190.0392 (8)0.0379 (10)0.0322 (8)0.0044 (7)0.0142 (6)−0.0043 (7)
Cl1—C31.7461 (16)C8—C91.5492 (18)
N1—C161.1445 (19)C8—H8A0.9900
N2—C191.3376 (18)C8—H8B0.9900
N2—N31.3585 (18)C9—C161.479 (2)
N2—C171.4444 (17)C9—C101.5332 (17)
N3—C181.3178 (19)C9—C171.5537 (18)
N4—C191.314 (2)C10—C151.386 (2)
N4—C181.351 (2)C10—C111.388 (2)
C1—C61.379 (2)C11—C121.386 (2)
C1—C21.382 (2)C11—H110.9500
C1—H10.9500C12—C131.377 (2)
C2—C31.372 (2)C12—H120.9500
C2—H20.9500C13—C141.376 (2)
C3—C41.367 (3)C13—H130.9500
C4—C51.388 (2)C14—C151.392 (2)
C4—H40.9500C14—H140.9500
C5—C61.382 (2)C15—H150.9500
C5—H50.9500C17—H17A0.9900
C6—C71.5124 (19)C17—H17B0.9900
C7—C81.5273 (19)C18—H180.9500
C7—H7A0.9900C19—H190.9500
C7—H7B0.9900
C19—N2—N3109.39 (12)C16—C9—C8106.43 (11)
C19—N2—C17130.06 (14)C10—C9—C8114.28 (11)
N3—N2—C17119.81 (12)C16—C9—C17109.49 (12)
C18—N3—N2101.96 (13)C10—C9—C17108.56 (10)
C19—N4—C18102.36 (13)C8—C9—C17107.94 (10)
C6—C1—C2121.52 (15)C15—C10—C11118.93 (13)
C6—C1—H1119.2C15—C10—C9120.87 (13)
C2—C1—H1119.2C11—C10—C9119.90 (12)
C3—C2—C1118.87 (17)C12—C11—C10120.47 (14)
C3—C2—H2120.6C12—C11—H11119.8
C1—C2—H2120.6C10—C11—H11119.8
C4—C3—C2121.31 (15)C13—C12—C11120.22 (16)
C4—C3—Cl1119.53 (14)C13—C12—H12119.9
C2—C3—Cl1119.16 (15)C11—C12—H12119.9
C3—C4—C5119.02 (16)C14—C13—C12119.92 (14)
C3—C4—H4120.5C14—C13—H13120.0
C5—C4—H4120.5C12—C13—H13120.0
C6—C5—C4121.15 (17)C13—C14—C15120.11 (14)
C6—C5—H5119.4C13—C14—H14119.9
C4—C5—H5119.4C15—C14—H14119.9
C1—C6—C5118.10 (14)C10—C15—C14120.35 (15)
C1—C6—C7120.59 (13)C10—C15—H15119.8
C5—C6—C7121.30 (15)C14—C15—H15119.8
C6—C7—C8111.85 (12)N1—C16—C9175.67 (15)
C6—C7—H7A109.2N2—C17—C9112.33 (11)
C8—C7—H7A109.2N2—C17—H17A109.1
C6—C7—H7B109.2C9—C17—H17A109.1
C8—C7—H7B109.2N2—C17—H17B109.1
H7A—C7—H7B107.9C9—C17—H17B109.1
C7—C8—C9114.21 (11)H17A—C17—H17B107.9
C7—C8—H8A108.7N3—C18—N4115.46 (16)
C9—C8—H8A108.7N3—C18—H18122.3
C7—C8—H8B108.7N4—C18—H18122.3
C9—C8—H8B108.7N4—C19—N2110.83 (15)
H8A—C8—H8B107.6N4—C19—H19124.6
C16—C9—C10110.05 (11)N2—C19—H19124.6
C19—N2—N3—C18−0.44 (17)C16—C9—C10—C11−159.29 (13)
C17—N2—N3—C18−171.49 (14)C8—C9—C10—C11−39.62 (17)
C6—C1—C2—C3−1.1 (3)C17—C9—C10—C1180.90 (15)
C1—C2—C3—C4−0.2 (3)C15—C10—C11—C12−0.5 (2)
C1—C2—C3—Cl1179.73 (13)C9—C10—C11—C12−174.29 (13)
C2—C3—C4—C51.0 (3)C10—C11—C12—C130.5 (2)
Cl1—C3—C4—C5−178.99 (14)C11—C12—C13—C140.1 (2)
C3—C4—C5—C6−0.4 (3)C12—C13—C14—C15−0.6 (2)
C2—C1—C6—C51.5 (2)C11—C10—C15—C140.0 (2)
C2—C1—C6—C7−179.47 (15)C9—C10—C15—C14173.75 (13)
C4—C5—C6—C1−0.8 (2)C13—C14—C15—C100.5 (2)
C4—C5—C6—C7−179.76 (15)C19—N2—C17—C9−94.71 (18)
C1—C6—C7—C8−77.25 (17)N3—N2—C17—C974.23 (16)
C5—C6—C7—C8101.70 (17)C16—C9—C17—N2−65.98 (14)
C6—C7—C8—C9174.47 (12)C10—C9—C17—N254.17 (16)
C7—C8—C9—C1660.28 (15)C8—C9—C17—N2178.56 (11)
C7—C8—C9—C10−61.39 (16)N2—N3—C18—N40.2 (2)
C7—C8—C9—C17177.73 (12)C19—N4—C18—N30.0 (2)
C16—C9—C10—C1527.07 (17)C18—N4—C19—N2−0.34 (19)
C8—C9—C10—C15146.73 (13)N3—N2—C19—N40.52 (18)
C17—C9—C10—C15−92.74 (15)C17—N2—C19—N4170.36 (14)
D—H···AD—HH···AD···AD—H···A
C8—H8A···N1i0.992.533.522 (2)178
C11—H11···N1i0.952.603.533 (2)166
C17—H17A···N1ii0.992.583.5101 (18)156
C18—H18···N4iii0.952.463.277 (2)144
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
C8H8AN1i 0.992.533.522(2)178
C11H11N1i 0.952.603.533(2)166
C17H17AN1ii 0.992.583.5101(18)156
C18H18N4iii 0.952.463.277(2)144

Symmetry codes: (i) ; (ii) ; (iii) .

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