| Literature DB >> 26396900 |
Sammer Yousuf1, Shafqat Hussain2, Khalid Mohammed Khan1, Muhammad Shabeer1, Shahnaz Perveen3.
Abstract
In the title coumarin derivative, C12H10O5, the fused ring system is almost planar (r.m.s deviation = 0.016 Å). The Car-C-C=O torsion angle of the side chain is -8.4 (2)° In the crystal, mol-ecules are linked by O-H⋯O hydrogen bonds, generating C(8) chains propagating in the [100] direction. The chains are cross-linked by weak C-H⋯O inter-actions, thereby generating undulating (001) sheets.Entities:
Keywords: chromene; coumarin; crystal structure; ester; hydrogen bonding
Year: 2015 PMID: 26396900 PMCID: PMC4555392 DOI: 10.1107/S2056989015014061
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C12H10O5 | |
| Mo | |
| Orthorhombic, | Cell parameters from 4477 reflections |
| θ = 2.4–28.3° | |
| µ = 0.12 mm−1 | |
| Plate, yellow | |
| 0.62 × 0.35 × 0.07 mm | |
| Bruker SMART APEX CCD diffractometer | 1958 independent reflections |
| Radiation source: fine-focus sealed tube | 1669 reflections with |
| Graphite monochromator | |
| ω scan | θmax = 25.5°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 11536 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1958 reflections | (Δ/σ)max < 0.001 |
| 158 parameters | Δρmax = 0.28 e Å−3 |
| 0 restraints | Δρmin = −0.19 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.42044 (8) | 0.1647 (2) | 0.43882 (5) | 0.0591 (4) | |
| O2 | 0.58807 (7) | 0.16062 (15) | 0.44081 (4) | 0.0403 (3) | |
| O3 | 0.94960 (9) | 0.1761 (2) | 0.45283 (6) | 0.0597 (4) | |
| O4 | 0.64831 (11) | 0.23456 (17) | 0.22259 (5) | 0.0633 (4) | |
| O5 | 0.64257 (9) | −0.01095 (16) | 0.16271 (5) | 0.0525 (3) | |
| C1 | 0.50365 (12) | 0.0564 (2) | 0.35141 (6) | 0.0440 (4) | |
| H1A | 0.4432 | 0.0350 | 0.3305 | 0.053* | |
| C2 | 0.49845 (11) | 0.1288 (2) | 0.41145 (7) | 0.0432 (4) | |
| C3 | 0.68119 (11) | 0.12502 (18) | 0.41444 (6) | 0.0338 (3) | |
| C4 | 0.76625 (11) | 0.1663 (2) | 0.44865 (6) | 0.0365 (3) | |
| H4A | 0.7595 | 0.2141 | 0.4872 | 0.044* | |
| C5 | 0.86154 (11) | 0.1347 (2) | 0.42403 (6) | 0.0397 (4) | |
| C6 | 0.87047 (12) | 0.0581 (2) | 0.36677 (7) | 0.0414 (4) | |
| H6A | 0.9349 | 0.0341 | 0.3509 | 0.050* | |
| C7 | 0.78507 (11) | 0.01819 (19) | 0.33383 (6) | 0.0376 (3) | |
| H7A | 0.7923 | −0.0328 | 0.2957 | 0.045* | |
| C8 | 0.68705 (11) | 0.05257 (18) | 0.35637 (6) | 0.0336 (3) | |
| C9 | 0.59328 (12) | 0.01865 (19) | 0.32448 (6) | 0.0375 (3) | |
| C10 | 0.59598 (12) | −0.0602 (2) | 0.26187 (6) | 0.0426 (4) | |
| H10A | 0.6403 | −0.1677 | 0.2617 | 0.051* | |
| H10B | 0.5278 | −0.1013 | 0.2512 | 0.051* | |
| C11 | 0.63285 (11) | 0.0736 (2) | 0.21485 (6) | 0.0379 (3) | |
| C12 | 0.67778 (15) | 0.1002 (3) | 0.11240 (8) | 0.0640 (5) | |
| H12A | 0.6822 | 0.0244 | 0.0771 | 0.096* | |
| H12B | 0.7440 | 0.1503 | 0.1214 | 0.096* | |
| H12C | 0.6304 | 0.1993 | 0.1054 | 0.096* | |
| H3 | 0.9369 (17) | 0.231 (3) | 0.4915 (11) | 0.091 (7)* |
| O1 | 0.0375 (6) | 0.0935 (10) | 0.0463 (7) | 0.0056 (6) | 0.0053 (5) | −0.0091 (6) |
| O2 | 0.0358 (6) | 0.0533 (6) | 0.0318 (5) | 0.0014 (5) | 0.0024 (4) | −0.0043 (4) |
| O3 | 0.0379 (7) | 0.0923 (10) | 0.0489 (7) | −0.0035 (6) | −0.0062 (5) | −0.0117 (6) |
| O4 | 0.1002 (11) | 0.0475 (7) | 0.0424 (6) | −0.0102 (7) | −0.0047 (6) | −0.0019 (5) |
| O5 | 0.0647 (8) | 0.0582 (7) | 0.0345 (6) | −0.0042 (6) | 0.0086 (5) | −0.0083 (5) |
| C1 | 0.0401 (9) | 0.0549 (9) | 0.0371 (8) | −0.0024 (7) | −0.0052 (6) | −0.0016 (7) |
| C2 | 0.0390 (8) | 0.0527 (9) | 0.0379 (8) | 0.0009 (7) | 0.0006 (6) | 0.0009 (7) |
| C3 | 0.0375 (8) | 0.0340 (7) | 0.0298 (7) | 0.0035 (6) | 0.0027 (6) | 0.0018 (5) |
| C4 | 0.0420 (9) | 0.0400 (7) | 0.0276 (6) | 0.0000 (6) | −0.0010 (6) | −0.0025 (5) |
| C5 | 0.0387 (8) | 0.0436 (8) | 0.0368 (8) | −0.0002 (6) | −0.0041 (6) | 0.0017 (6) |
| C6 | 0.0391 (8) | 0.0451 (8) | 0.0401 (8) | 0.0053 (7) | 0.0056 (6) | −0.0003 (6) |
| C7 | 0.0455 (9) | 0.0360 (7) | 0.0314 (7) | 0.0038 (6) | 0.0032 (6) | −0.0024 (6) |
| C8 | 0.0399 (8) | 0.0310 (7) | 0.0300 (7) | 0.0009 (6) | −0.0003 (6) | −0.0001 (5) |
| C9 | 0.0451 (9) | 0.0360 (7) | 0.0314 (7) | −0.0023 (6) | −0.0024 (6) | 0.0007 (6) |
| C10 | 0.0486 (9) | 0.0446 (8) | 0.0345 (8) | −0.0049 (7) | −0.0046 (6) | −0.0055 (6) |
| C11 | 0.0346 (8) | 0.0464 (8) | 0.0327 (7) | 0.0005 (6) | −0.0059 (6) | −0.0049 (6) |
| C12 | 0.0679 (12) | 0.0845 (14) | 0.0394 (9) | −0.0071 (10) | 0.0132 (8) | 0.0016 (9) |
| O1—C2 | 1.2165 (18) | C4—H4A | 0.9300 |
| O2—C2 | 1.3617 (18) | C5—C6 | 1.395 (2) |
| O2—C3 | 1.3764 (17) | C6—C7 | 1.367 (2) |
| O3—C5 | 1.3515 (18) | C6—H6A | 0.9300 |
| O3—H3 | 0.96 (2) | C7—C8 | 1.399 (2) |
| O4—C11 | 1.1944 (19) | C7—H7A | 0.9300 |
| O5—C11 | 1.3183 (17) | C8—C9 | 1.438 (2) |
| O5—C12 | 1.454 (2) | C9—C10 | 1.5064 (19) |
| C1—C9 | 1.345 (2) | C10—C11 | 1.505 (2) |
| C1—C2 | 1.437 (2) | C10—H10A | 0.9700 |
| C1—H1A | 0.9300 | C10—H10B | 0.9700 |
| C3—C4 | 1.381 (2) | C12—H12A | 0.9600 |
| C3—C8 | 1.3971 (19) | C12—H12B | 0.9600 |
| C4—C5 | 1.380 (2) | C12—H12C | 0.9600 |
| C2—O2—C3 | 121.67 (11) | C8—C7—H7A | 119.4 |
| C5—O3—H3 | 111.6 (14) | C3—C8—C7 | 116.67 (12) |
| C11—O5—C12 | 116.88 (13) | C3—C8—C9 | 118.30 (13) |
| C9—C1—C2 | 122.00 (13) | C7—C8—C9 | 125.03 (12) |
| C9—C1—H1A | 119.0 | C1—C9—C8 | 119.25 (13) |
| C2—C1—H1A | 119.0 | C1—C9—C10 | 120.65 (13) |
| O1—C2—O2 | 116.43 (13) | C8—C9—C10 | 120.09 (13) |
| O1—C2—C1 | 125.70 (14) | C11—C10—C9 | 114.04 (12) |
| O2—C2—C1 | 117.87 (13) | C11—C10—H10A | 108.7 |
| O2—C3—C4 | 115.91 (12) | C9—C10—H10A | 108.7 |
| O2—C3—C8 | 120.90 (12) | C11—C10—H10B | 108.7 |
| C4—C3—C8 | 123.19 (13) | C9—C10—H10B | 108.7 |
| C5—C4—C3 | 118.19 (13) | H10A—C10—H10B | 107.6 |
| C5—C4—H4A | 120.9 | O4—C11—O5 | 124.29 (14) |
| C3—C4—H4A | 120.9 | O4—C11—C10 | 125.51 (13) |
| O3—C5—C4 | 122.97 (13) | O5—C11—C10 | 110.16 (13) |
| O3—C5—C6 | 116.74 (14) | O5—C12—H12A | 109.5 |
| C4—C5—C6 | 120.28 (13) | O5—C12—H12B | 109.5 |
| C7—C6—C5 | 120.38 (14) | H12A—C12—H12B | 109.5 |
| C7—C6—H6A | 119.8 | O5—C12—H12C | 109.5 |
| C5—C6—H6A | 119.8 | H12A—C12—H12C | 109.5 |
| C6—C7—C8 | 121.25 (13) | H12B—C12—H12C | 109.5 |
| C6—C7—H7A | 119.4 | ||
| C3—O2—C2—O1 | 179.92 (13) | C4—C3—C8—C9 | −178.69 (13) |
| C3—O2—C2—C1 | −0.1 (2) | C6—C7—C8—C3 | −1.5 (2) |
| C9—C1—C2—O1 | −179.37 (16) | C6—C7—C8—C9 | 178.62 (13) |
| C9—C1—C2—O2 | 0.7 (2) | C2—C1—C9—C8 | −0.4 (2) |
| C2—O2—C3—C4 | 178.95 (12) | C2—C1—C9—C10 | 178.94 (14) |
| C2—O2—C3—C8 | −0.7 (2) | C3—C8—C9—C1 | −0.4 (2) |
| O2—C3—C4—C5 | −179.42 (12) | C7—C8—C9—C1 | 179.48 (14) |
| C8—C3—C4—C5 | 0.2 (2) | C3—C8—C9—C10 | −179.72 (13) |
| C3—C4—C5—O3 | 177.69 (14) | C7—C8—C9—C10 | 0.1 (2) |
| C3—C4—C5—C6 | −1.8 (2) | C1—C9—C10—C11 | 108.63 (16) |
| O3—C5—C6—C7 | −177.79 (14) | C8—C9—C10—C11 | −72.02 (18) |
| C4—C5—C6—C7 | 1.8 (2) | C12—O5—C11—O4 | 2.1 (2) |
| C5—C6—C7—C8 | 0.0 (2) | C12—O5—C11—C10 | −179.98 (14) |
| O2—C3—C8—C7 | −178.95 (12) | C9—C10—C11—O4 | −8.4 (2) |
| C4—C3—C8—C7 | 1.5 (2) | C9—C10—C11—O5 | 173.79 (13) |
| O2—C3—C8—C9 | 0.91 (19) |
| H··· | ||||
| O3—H3···O1i | 0.96 (2) | 1.74 (2) | 2.7002 (17) | 177 (2) |
| C7—H7 | 0.93 | 2.47 | 3.3320 (18) | 155 |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| O3H3O1i | 0.96(2) | 1.74(2) | 2.7002(17) | 177(2) |
| C7H7 | 0.93 | 2.47 | 3.3320(18) | 155 |
Symmetry codes: (i) ; (ii) .