Literature DB >> 26396881

Crystal structure of 2,5-di-methyl-anilinium salicylate.

A Mani1, P Praveen Kumar2, G Chakkaravarthi3.   

Abstract

The title mol-ecular salt, C8H12N(+)·C7H5O3 (-) arose from the proton-transfer reaction between 2,5-xylidine and salicylic acid. In the anion, the dihedral angle between the planes of the aromatic ring and the -CO2 (-) group is 11.08 (8)°; this near planarity is consolidated by an intra-molecular O-H⋯O hydrogen bond. In the crystal, the components are connected by N-H⋯O hydrogen bonds, with all three O atoms in the anion acting as acceptors; the result is a [100] chain. The structure also features weak C-H⋯O bonds and aromatic π-π stacking [centroid-to-centroid distance = 3.7416 (10) Å] inter-actions, which lead to a three-dimensional network.

Entities:  

Keywords:  aromatic π–π stacking inter­actions; crystal structure; hydrogen bonding

Year:  2015        PMID: 26396881      PMCID: PMC4555438          DOI: 10.1107/S2056989015014401

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For related structures, see: Fun et al. (2011 ▸); Mathlouthi et al. (2014 ▸); Smirani & Rzaigui (2009 ▸).

Experimental

Crystal data

C8H12NC7H5O3 M = 259.30 Monoclinic, a = 6.9645 (5) Å b = 20.6924 (14) Å c = 9.2920 (7) Å β = 95.738 (3)° V = 1332.38 (17) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 295 K 0.26 × 0.24 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▸) T min = 0.977, T max = 0.982 17007 measured reflections 3384 independent reflections 2339 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.134 S = 1.01 3384 reflections 178 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.22 e Å−3 Δρmin = −0.21 e Å−3

Data collection: APEX2 (Bruker, 2004 ▸); cell refinement: SAINT (Bruker, 2004 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▸); molecular graphics: PLATON (Spek, 2009 ▸); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015014401/hb7474sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015014401/hb7474Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015014401/hb7474Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015014401/hb7474fig1.tif The mol­ecular structure of (I), with 30% probability displacement ellipsoids for non-H atoms. Click here for additional data file. a . DOI: 10.1107/S2056989015014401/hb7474fig2.tif The packing of (I), viewed down a axis. Hydrogen bonds are shown as dashed lines. H atoms not involved in hydrogen bonding have been omitted for clarity. CCDC reference: 1415922 Additional supporting information: crystallographic information; 3D view; checkCIF report
C8H12N+·C7H5O3F(000) = 552
Mr = 259.30Dx = 1.293 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4550 reflections
a = 6.9645 (5) Åθ = 2.4–28.1°
b = 20.6924 (14) ŵ = 0.09 mm1
c = 9.2920 (7) ÅT = 295 K
β = 95.738 (3)°Block, colourless
V = 1332.38 (17) Å30.26 × 0.24 × 0.20 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer3384 independent reflections
Radiation source: fine-focus sealed tube2339 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.030
ω and φ scanθmax = 28.7°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −8→9
Tmin = 0.977, Tmax = 0.982k = −27→27
17007 measured reflectionsl = −12→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.134H atoms treated by a mixture of independent and constrained refinement
S = 1.01w = 1/[σ2(Fo2) + (0.0641P)2 + 0.3396P] where P = (Fo2 + 2Fc2)/3
3384 reflections(Δ/σ)max < 0.001
178 parametersΔρmax = 0.22 e Å3
1 restraintΔρmin = −0.21 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.52627 (19)0.05604 (7)0.67259 (15)0.0271 (3)
C20.5588 (2)0.09450 (8)0.55505 (17)0.0371 (4)
H20.68250.11000.54630.045*
C30.4109 (3)0.11016 (9)0.45114 (18)0.0474 (4)
H30.43520.13500.37150.057*
C40.2267 (3)0.08870 (9)0.46651 (18)0.0467 (4)
H40.12600.10020.39790.056*
C50.1897 (2)0.05073 (9)0.58152 (18)0.0405 (4)
H50.06460.03690.59110.049*
C60.3394 (2)0.03300 (7)0.68349 (16)0.0303 (3)
C70.6859 (2)0.04029 (7)0.78590 (16)0.0303 (3)
C80.01106 (19)0.35845 (7)0.60141 (15)0.0281 (3)
C9−0.1341 (2)0.33448 (7)0.67764 (16)0.0326 (3)
H9−0.22890.36220.70520.039*
C10−0.1397 (2)0.26951 (8)0.71351 (18)0.0384 (4)
C110.0036 (3)0.23006 (8)0.6699 (2)0.0471 (4)
H110.00230.18620.69140.057*
C120.1487 (3)0.25462 (8)0.5951 (2)0.0484 (5)
H120.24400.22680.56860.058*
C130.1568 (2)0.31966 (8)0.55812 (18)0.0367 (4)
C140.3146 (3)0.34526 (9)0.4753 (2)0.0562 (5)
H14A0.25890.36510.38740.084*
H14B0.39710.31040.45240.084*
H14C0.38860.37670.53290.084*
C15−0.2965 (3)0.24282 (9)0.7963 (2)0.0571 (5)
H15A−0.27830.19710.80940.086*
H15B−0.41980.25070.74330.086*
H15C−0.29170.26350.88900.086*
N10.00494 (17)0.42673 (5)0.56098 (14)0.0306 (3)
H1A−0.03460.43040.46730.046*
H1B0.12230.44380.57850.046*
H1C−0.07660.44750.61260.046*
O10.84427 (15)0.06900 (6)0.78665 (13)0.0441 (3)
O20.65428 (15)−0.00223 (6)0.87917 (13)0.0431 (3)
O30.29811 (16)−0.00571 (6)0.79399 (13)0.0469 (3)
H3A0.402 (2)−0.0124 (11)0.844 (2)0.070*
U11U22U33U12U13U23
C10.0274 (7)0.0264 (7)0.0274 (7)0.0019 (5)0.0017 (6)−0.0008 (5)
C20.0388 (8)0.0367 (8)0.0365 (8)−0.0016 (7)0.0067 (7)0.0049 (7)
C30.0619 (12)0.0442 (10)0.0355 (9)0.0061 (8)0.0017 (8)0.0117 (7)
C40.0468 (10)0.0568 (11)0.0337 (9)0.0155 (8)−0.0099 (7)0.0011 (8)
C50.0291 (8)0.0546 (10)0.0365 (9)0.0022 (7)−0.0037 (7)−0.0051 (7)
C60.0287 (7)0.0336 (7)0.0284 (7)−0.0007 (6)0.0021 (6)0.0000 (6)
C70.0257 (7)0.0345 (8)0.0308 (7)0.0014 (6)0.0036 (6)0.0004 (6)
C80.0281 (7)0.0252 (7)0.0296 (7)0.0024 (5)−0.0032 (6)−0.0023 (6)
C90.0293 (7)0.0318 (7)0.0365 (8)0.0021 (6)0.0017 (6)−0.0035 (6)
C100.0423 (9)0.0350 (8)0.0371 (8)−0.0039 (7)0.0005 (7)0.0021 (7)
C110.0547 (11)0.0282 (8)0.0579 (11)0.0044 (7)0.0025 (9)0.0050 (8)
C120.0450 (10)0.0346 (9)0.0659 (12)0.0127 (7)0.0066 (9)−0.0058 (8)
C130.0338 (8)0.0335 (8)0.0431 (9)0.0033 (6)0.0050 (7)−0.0046 (7)
C140.0482 (11)0.0482 (10)0.0763 (14)0.0038 (8)0.0272 (10)−0.0080 (10)
C150.0622 (12)0.0484 (11)0.0629 (12)−0.0095 (9)0.0165 (10)0.0084 (9)
N10.0274 (6)0.0268 (6)0.0370 (7)0.0000 (5)0.0003 (5)−0.0015 (5)
O10.0278 (6)0.0586 (7)0.0452 (7)−0.0091 (5)−0.0002 (5)0.0057 (6)
O20.0305 (6)0.0545 (7)0.0429 (6)−0.0005 (5)−0.0028 (5)0.0203 (5)
O30.0300 (6)0.0659 (8)0.0436 (7)−0.0128 (5)−0.0013 (5)0.0194 (6)
C1—C21.388 (2)C9—H90.9300
C1—C61.399 (2)C10—C111.381 (2)
C1—C71.4886 (19)C10—C151.502 (3)
C2—C31.378 (2)C11—C121.379 (3)
C2—H20.9300C11—H110.9300
C3—C41.379 (3)C12—C131.392 (2)
C3—H30.9300C12—H120.9300
C4—C51.371 (2)C13—C141.500 (2)
C4—H40.9300C14—H14A0.9600
C5—C61.386 (2)C14—H14B0.9600
C5—H50.9300C14—H14C0.9600
C6—O31.3556 (18)C15—H15A0.9600
C7—O11.2524 (17)C15—H15B0.9600
C7—O21.2696 (18)C15—H15C0.9600
C8—C91.383 (2)N1—H1A0.8900
C8—C131.385 (2)N1—H1B0.8900
C8—N11.4615 (18)N1—H1C0.8900
C9—C101.387 (2)O3—H3A0.829 (10)
C2—C1—C6118.59 (13)C9—C10—C15121.27 (15)
C2—C1—C7120.85 (13)C12—C11—C10121.15 (15)
C6—C1—C7120.55 (13)C12—C11—H11119.4
C3—C2—C1121.10 (15)C10—C11—H11119.4
C3—C2—H2119.4C11—C12—C13122.07 (15)
C1—C2—H2119.4C11—C12—H12119.0
C2—C3—C4119.33 (16)C13—C12—H12119.0
C2—C3—H3120.3C8—C13—C12116.06 (15)
C4—C3—H3120.3C8—C13—C14122.70 (14)
C5—C4—C3120.96 (15)C12—C13—C14121.23 (15)
C5—C4—H4119.5C13—C14—H14A109.5
C3—C4—H4119.5C13—C14—H14B109.5
C4—C5—C6119.82 (15)H14A—C14—H14B109.5
C4—C5—H5120.1C13—C14—H14C109.5
C6—C5—H5120.1H14A—C14—H14C109.5
O3—C6—C5118.17 (13)H14B—C14—H14C109.5
O3—C6—C1121.70 (12)C10—C15—H15A109.5
C5—C6—C1120.12 (14)C10—C15—H15B109.5
O1—C7—O2122.51 (13)H15A—C15—H15B109.5
O1—C7—C1119.68 (13)C10—C15—H15C109.5
O2—C7—C1117.81 (12)H15A—C15—H15C109.5
C9—C8—C13122.38 (14)H15B—C15—H15C109.5
C9—C8—N1118.31 (12)C8—N1—H1A109.5
C13—C8—N1119.27 (13)C8—N1—H1B109.5
C8—C9—C10120.71 (14)H1A—N1—H1B109.5
C8—C9—H9119.6C8—N1—H1C109.5
C10—C9—H9119.6H1A—N1—H1C109.5
C11—C10—C9117.62 (15)H1B—N1—H1C109.5
C11—C10—C15121.10 (15)C6—O3—H3A106.5 (16)
C6—C1—C2—C30.3 (2)C6—C1—C7—O210.7 (2)
C7—C1—C2—C3−178.85 (15)C13—C8—C9—C10−0.4 (2)
C1—C2—C3—C41.8 (3)N1—C8—C9—C10177.30 (13)
C2—C3—C4—C5−1.7 (3)C8—C9—C10—C11−0.2 (2)
C3—C4—C5—C6−0.6 (3)C8—C9—C10—C15−179.99 (15)
C4—C5—C6—O3−178.60 (15)C9—C10—C11—C120.9 (3)
C4—C5—C6—C12.7 (2)C15—C10—C11—C12−179.39 (17)
C2—C1—C6—O3178.81 (14)C10—C11—C12—C13−0.9 (3)
C7—C1—C6—O3−2.0 (2)C9—C8—C13—C120.4 (2)
C2—C1—C6—C5−2.6 (2)N1—C8—C13—C12−177.30 (14)
C7—C1—C6—C5176.58 (14)C9—C8—C13—C14179.91 (15)
C2—C1—C7—O110.0 (2)N1—C8—C13—C142.3 (2)
C6—C1—C7—O1−169.13 (14)C11—C12—C13—C80.3 (3)
C2—C1—C7—O2−170.18 (14)C11—C12—C13—C14−179.29 (17)
D—H···AD—HH···AD···AD—H···A
O3—H3A···O20.83 (1)1.77 (1)2.5282 (15)151 (2)
N1—H1A···O1i0.891.802.6809 (17)169
N1—H1B···O2ii0.891.922.7998 (16)168
N1—H1C···O3iii0.892.082.9654 (17)171
C5—H5···O1iv0.932.583.237 (2)128
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
O3H3AO20.83(1)1.77(1)2.5282(15)151(2)
N1H1AO1i 0.891.802.6809(17)169
N1H1BO2ii 0.891.922.7998(16)168
N1H1CO3iii 0.892.082.9654(17)171
C5H5O1iv 0.932.583.237(2)128

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2,5-Dimethyl-anilinium chloride monohydrate.

Authors:  Wajda Smirani; Mohamed Rzaigui
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-12-10

3.  Cyclo-benzaprinium salicylate.

Authors:  Hoong-Kun Fun; Chin Sing Yeap; M S Siddegowda; H S Yathirajan; B Narayana
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-04

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20

5.  Crystal structure of 2,5-di-methyl-anilinium hydrogen maleate.

Authors:  Maha Mathlouthi; Daron E Janzen; Mohamed Rzaigui; Wajda Smirani Sta
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-10-24
  5 in total

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