Literature DB >> 26396871

Crystal structure of bis-(μ2-tetra-bromo-phthalato-κ(2) O (1):O (2))bis[aqua(N,N,N',N'-tetra-methyl-ethane-1,2-di-amine-κ(2) N,N')copper(II)].

Luis Manuel Tobón-Trujillo1, Luis Felipe Villanueva-Sánchez1, Diego Martínez-Otero1, Alejandro Dorazco-González1.   

Abstract

In the title complex, [Cu2(C8Br4O4)2(C6H16N2)2(H2O)2], the Cu(II) cation is chelated by a tetra-methyl-ethane-1,2-di-amine ligand and coordinated by a water mol-ecule as well as bridged by two tetra-bromo-phthalate anions in a distorted O3N2 trigonal-bipyramidal geometry. The two symmetry-related tetra-bromo-phthalate anions bridge the two Cu(II) cations, forming a centrosymmetric dinuclear complex in which the CuCu separation is 5.054 (2) Å. Intra-molecular classic O-H⋯O hydrogen bonds and weak C-H⋯O hydrogen bonds occur in the dinuclear mol-ecule. In the crystal, the mol-ecules are linked by weak C-H⋯Br and C-H⋯O inter-actions into supra-molecular chains propagating along the b-axis direction.

Entities:  

Keywords:  copper(II) complex; crystal structure; hydrogen bonding; tetra­bromo­phthalate anion; tetra­methyl­ethane-1,2-di­amine

Year:  2015        PMID: 26396871      PMCID: PMC4555376          DOI: 10.1107/S2056989015015194

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For the crystal structures of related copper(II) complexes with tetramethylethylen-1,2-diamine and carboxyl­ate ligands; see: Ene et al. (2009 ▸); Dorazco-González et al. (2013 ▸); Liang et al. (2004 ▸). For the synthesis of coordination compounds with one-dimensional polymeric structures, see: Hong & You (2004 ▸); Colacio et al. (2009 ▸); Rodpun et al. (2015 ▸); Yang et al. (2002 ▸). For their magnetic properties, see: Ene et al. (2009 ▸); Kozlevčar et al. (2004 ▸). For supra­molecular polymorphism, see: Dorazco-González et al. (2013 ▸); Stibrany et al. (2009 ▸); Aakeröy et al. (2003 ▸); Valdés-Martínez et al. (1993 ▸); Julve et al. (1984 ▸). For mol­ecular recognition and sensing; see: Dorazco-González & Yatsimirsky (2010 ▸); Mendy et al. (2010 ▸).

Experimental

Crystal data

[Cu2(C8Br4O4)2(C6H16N2)2(H2O)2] M = 1354.97 Monoclinic, a = 9.0961 (2) Å b = 9.2281 (2) Å c = 24.4026 (7) Å β = 95.4910 (6)° V = 2038.95 (9) Å3 Z = 2 Mo Kα radiation μ = 8.94 mm−1 T = 100 K 0.25 × 0.15 × 0.08 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2012 ▸) T min = 0.442, T max = 0.745 17394 measured reflections 3739 independent reflections 3547 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.016 wR(F 2) = 0.039 S = 1.07 3739 reflections 245 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.80 e Å−3 Δρmin = −0.41 e Å−3

Data collection: APEX2 (Bruker, 2012 ▸); cell refinement: SAINT (Bruker, 2012 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick 2008 ▸); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008 ▸); molecular graphics: SHELXTL (Sheldrick, 2008 ▸); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S2056989015015194/xu5866sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015015194/xu5866Isup2.hkl Click here for additional data file. . DOI: 10.1107/S2056989015015194/xu5866fig1.tif The structure with displacement ellipsoids drawn at the 30% probability level and H atoms shown as small spheres of arbitrary radii. Click here for additional data file. . DOI: 10.1107/S2056989015015194/xu5866fig2.tif View of inter­actions in the crystal. CCDC reference: 1418832 Additional supporting information: crystallographic information; 3D view; checkCIF report
[Cu2(C8Br4O4)2(C6H16N2)2(H2O)2]F(000) = 1300
Mr = 1354.97Dx = 2.207 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 9.0961 (2) ÅCell parameters from 9880 reflections
b = 9.2281 (2) Åθ = 2.4–25.7°
c = 24.4026 (7) ŵ = 8.94 mm1
β = 95.4910 (6)°T = 100 K
V = 2038.95 (9) Å3Prism, blue
Z = 20.25 × 0.15 × 0.08 mm
Bruker APEXII CCD diffractometer3739 independent reflections
Radiation source: Incoatec ImuS3547 reflections with I > 2σ(I)
Mirrors monochromatorRint = 0.019
ω scansθmax = 25.4°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2012)h = −10→10
Tmin = 0.442, Tmax = 0.745k = −11→11
17394 measured reflectionsl = −29→29
Refinement on F22 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.016H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.039w = 1/[σ2(Fo2) + (0.0162P)2 + 2.4857P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max = 0.002
3739 reflectionsΔρmax = 0.80 e Å3
245 parametersΔρmin = −0.41 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
Br10.34950 (2)0.30336 (3)0.71377 (2)0.01607 (6)
Br20.62992 (3)0.47283 (3)0.78249 (2)0.02118 (6)
Br30.95418 (3)0.47738 (3)0.73268 (2)0.01934 (6)
Br41.00627 (2)0.27574 (3)0.62483 (2)0.01671 (6)
Cu10.32727 (3)−0.12890 (3)0.55897 (2)0.01122 (6)
O10.45257 (16)0.02014 (16)0.59851 (6)0.0143 (3)
O20.32220 (16)0.22748 (16)0.58559 (6)0.0135 (3)
O30.65378 (16)0.19336 (16)0.52428 (6)0.0132 (3)
O40.79787 (17)0.02815 (16)0.57131 (6)0.0144 (3)
O50.17319 (17)0.01324 (17)0.53376 (6)0.0133 (3)
H5A0.205 (3)0.091 (2)0.5454 (10)0.016*
H5B0.179 (3)0.014 (3)0.5006 (7)0.016*
N10.4780 (2)−0.2831 (2)0.58485 (7)0.0153 (4)
N20.1667 (2)−0.2787 (2)0.57861 (8)0.0180 (4)
C10.5567 (2)0.2309 (2)0.63834 (8)0.0102 (4)
C20.5382 (2)0.3046 (2)0.68693 (8)0.0108 (4)
C30.6563 (2)0.3755 (2)0.71631 (8)0.0119 (4)
C40.7951 (2)0.3723 (2)0.69622 (8)0.0123 (4)
C50.8155 (2)0.2926 (2)0.64905 (8)0.0114 (4)
C60.6979 (2)0.2221 (2)0.62005 (8)0.0101 (4)
C70.4303 (2)0.1547 (2)0.60456 (8)0.0104 (4)
C80.7190 (2)0.1388 (2)0.56745 (8)0.0112 (4)
C90.3941 (3)−0.4200 (2)0.57551 (10)0.0206 (5)
H9A0.4525−0.50170.59250.025*
H9B0.3757−0.43880.53550.025*
C100.2483 (3)−0.4091 (3)0.60056 (11)0.0267 (6)
H10A0.1885−0.49700.59150.032*
H10B0.2665−0.40220.64110.032*
C110.6075 (3)−0.2849 (3)0.55284 (11)0.0221 (5)
H11A0.5747−0.29790.51370.033*
H11B0.6728−0.36510.56550.033*
H11C0.6611−0.19310.55810.033*
C120.5316 (3)−0.2652 (3)0.64386 (10)0.0295 (6)
H12A0.5925−0.17760.64850.044*
H12B0.5908−0.34970.65640.044*
H12C0.4470−0.25640.66570.044*
C130.0750 (3)−0.2171 (3)0.61946 (10)0.0270 (6)
H13A0.0211−0.13270.60360.040*
H13B0.1384−0.18740.65230.040*
H13C0.0045−0.29030.62970.040*
C140.0693 (3)−0.3163 (3)0.52836 (10)0.0244 (5)
H14A0.0251−0.22770.51190.037*
H14B−0.0091−0.38150.53810.037*
H14C0.1275−0.36440.50190.037*
U11U22U33U12U13U23
Br10.01284 (11)0.02352 (12)0.01199 (11)0.00231 (9)0.00185 (8)−0.00263 (9)
Br20.02459 (13)0.02531 (13)0.01399 (11)−0.00390 (10)0.00359 (9)−0.01160 (9)
Br30.02013 (12)0.02323 (13)0.01411 (11)−0.01075 (9)−0.00115 (8)−0.00597 (9)
Br40.01220 (11)0.02355 (13)0.01461 (11)−0.00571 (9)0.00253 (8)−0.00292 (9)
Cu10.01308 (13)0.00842 (13)0.01167 (13)−0.00056 (10)−0.00133 (10)−0.00121 (10)
O10.0144 (8)0.0097 (8)0.0178 (8)−0.0008 (6)−0.0039 (6)−0.0018 (6)
O20.0123 (8)0.0125 (8)0.0151 (8)0.0011 (6)−0.0019 (6)−0.0023 (6)
O30.0172 (8)0.0142 (8)0.0080 (7)0.0012 (6)0.0002 (6)−0.0017 (6)
O40.0168 (8)0.0129 (8)0.0130 (7)0.0032 (6)−0.0005 (6)−0.0012 (6)
O50.0160 (8)0.0127 (8)0.0109 (7)−0.0013 (6)−0.0006 (6)−0.0043 (6)
N10.0210 (10)0.0108 (9)0.0136 (9)−0.0004 (8)−0.0011 (7)0.0003 (7)
N20.0196 (10)0.0167 (10)0.0185 (10)−0.0029 (8)0.0052 (8)0.0036 (8)
C10.0138 (10)0.0060 (10)0.0103 (10)0.0006 (8)−0.0015 (8)0.0030 (8)
C20.0125 (10)0.0084 (10)0.0116 (10)0.0017 (8)0.0023 (8)0.0020 (8)
C30.0190 (11)0.0095 (10)0.0070 (10)0.0005 (9)0.0003 (8)−0.0012 (8)
C40.0160 (11)0.0100 (10)0.0100 (10)−0.0037 (9)−0.0040 (8)0.0007 (8)
C50.0131 (10)0.0115 (10)0.0100 (10)−0.0017 (8)0.0032 (8)0.0027 (8)
C60.0148 (11)0.0084 (10)0.0069 (10)0.0001 (8)−0.0003 (8)0.0031 (8)
C70.0122 (10)0.0117 (11)0.0074 (9)−0.0017 (8)0.0022 (8)−0.0004 (8)
C80.0104 (10)0.0117 (11)0.0116 (10)−0.0047 (9)0.0025 (8)−0.0009 (8)
C90.0255 (13)0.0097 (11)0.0260 (13)−0.0008 (10)0.0003 (10)0.0021 (9)
C100.0288 (14)0.0165 (12)0.0357 (15)−0.0019 (11)0.0077 (11)0.0117 (11)
C110.0169 (12)0.0180 (12)0.0311 (14)0.0039 (10)0.0009 (10)0.0069 (10)
C120.0426 (16)0.0238 (14)0.0194 (13)0.0077 (12)−0.0113 (11)0.0013 (10)
C130.0276 (14)0.0328 (15)0.0228 (13)0.0022 (12)0.0140 (11)0.0060 (11)
C140.0196 (12)0.0228 (13)0.0307 (14)−0.0104 (10)0.0010 (10)−0.0042 (11)
Br1—C21.895 (2)N1—C91.482 (3)
Br2—C31.883 (2)N1—C121.485 (3)
Br3—C41.892 (2)N2—C131.473 (3)
Br4—C51.893 (2)N2—C141.484 (3)
Cu1—O51.9744 (16)N2—C101.487 (3)
Cu1—O11.9776 (15)C1—C21.391 (3)
Cu1—N12.0340 (19)C1—C61.402 (3)
Cu1—N22.0995 (19)C1—C71.521 (3)
Cu1—O3i2.1396 (14)C2—C31.396 (3)
O1—C71.269 (3)C3—C41.398 (3)
O2—C71.243 (3)C4—C51.393 (3)
O3—C81.263 (3)C5—C61.387 (3)
O3—Cu1i2.1396 (14)C6—C81.524 (3)
O4—C81.246 (3)C9—C101.516 (3)
N1—C111.475 (3)
O5—Cu1—O192.80 (6)C2—C1—C7122.73 (19)
O5—Cu1—N1177.14 (7)C6—C1—C7117.98 (18)
O1—Cu1—N189.71 (7)C1—C2—C3121.13 (19)
O5—Cu1—N291.13 (7)C1—C2—Br1118.64 (16)
O1—Cu1—N2136.68 (7)C3—C2—Br1120.21 (16)
N1—Cu1—N286.10 (8)C2—C3—C4119.12 (19)
O5—Cu1—O3i90.46 (6)C2—C3—Br2120.61 (16)
O1—Cu1—O3i124.17 (6)C4—C3—Br2120.27 (15)
N1—Cu1—O3i89.26 (7)C5—C4—C3119.80 (19)
N2—Cu1—O3i98.90 (7)C5—C4—Br3120.18 (16)
C7—O1—Cu1130.25 (14)C3—C4—Br3120.02 (15)
C8—O3—Cu1i127.37 (14)C6—C5—C4120.80 (19)
C11—N1—C9109.53 (18)C6—C5—Br4119.17 (16)
C11—N1—C12108.07 (19)C4—C5—Br4120.01 (16)
C9—N1—C12111.12 (19)C5—C6—C1119.73 (19)
C11—N1—Cu1113.14 (14)C5—C6—C8120.89 (19)
C9—N1—Cu1103.09 (14)C1—C6—C8119.35 (18)
C12—N1—Cu1111.86 (15)O2—C7—O1127.93 (19)
C13—N2—C14108.52 (19)O2—C7—C1118.85 (18)
C13—N2—C10111.32 (19)O1—C7—C1113.20 (18)
C14—N2—C10110.3 (2)O4—C8—O3127.65 (19)
C13—N2—Cu1110.61 (15)O4—C8—C6117.88 (18)
C14—N2—Cu1109.81 (14)O3—C8—C6114.47 (18)
C10—N2—Cu1106.31 (14)N1—C9—C10109.8 (2)
C2—C1—C6119.26 (19)N2—C10—C9109.52 (19)
C6—C1—C2—C33.0 (3)C2—C1—C6—C8178.75 (18)
C7—C1—C2—C3−178.78 (19)C7—C1—C6—C80.5 (3)
C6—C1—C2—Br1−175.50 (15)Cu1—O1—C7—O2−1.5 (3)
C7—C1—C2—Br12.7 (3)Cu1—O1—C7—C1−179.92 (13)
C1—C2—C3—C40.2 (3)C2—C1—C7—O260.4 (3)
Br1—C2—C3—C4178.71 (15)C6—C1—C7—O2−121.4 (2)
C1—C2—C3—Br2−179.24 (15)C2—C1—C7—O1−121.0 (2)
Br1—C2—C3—Br2−0.7 (2)C6—C1—C7—O157.2 (2)
C2—C3—C4—C5−3.3 (3)Cu1i—O3—C8—O4−6.9 (3)
Br2—C3—C4—C5176.09 (16)Cu1i—O3—C8—C6172.16 (13)
C2—C3—C4—Br3176.10 (15)C5—C6—C8—O466.3 (3)
Br2—C3—C4—Br3−4.5 (2)C1—C6—C8—O4−115.6 (2)
C3—C4—C5—C63.3 (3)C5—C6—C8—O3−112.8 (2)
Br3—C4—C5—C6−176.16 (16)C1—C6—C8—O365.3 (3)
C3—C4—C5—Br4−175.18 (16)C11—N1—C9—C10−170.79 (19)
Br3—C4—C5—Br45.4 (2)C12—N1—C9—C1069.9 (2)
C4—C5—C6—C10.0 (3)Cu1—N1—C9—C10−50.1 (2)
Br4—C5—C6—C1178.46 (15)C13—N2—C10—C9−148.7 (2)
C4—C5—C6—C8178.09 (19)C14—N2—C10—C990.8 (2)
Br4—C5—C6—C8−3.4 (3)Cu1—N2—C10—C9−28.2 (2)
C2—C1—C6—C5−3.1 (3)N1—C9—C10—N254.4 (3)
C7—C1—C6—C5178.62 (18)
D—H···AD—HH···AD···AD—H···A
O5—H5A···O20.81 (2)1.87 (2)2.649 (2)161 (2)
O5—H5B···O4i0.82 (2)1.83 (2)2.630 (2)167 (3)
C10—H10A···Br4ii0.992.843.729 (3)150
C11—H11C···O40.982.403.376 (3)179
C13—H13A···O4iii0.982.583.506 (3)158
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
O5H5AO20.81(2)1.87(2)2.649(2)161(2)
O5H5BO4i 0.82(2)1.83(2)2.630(2)167(3)
C10H10ABr4ii 0.992.843.729(3)150
C11H11CO40.982.403.376(3)179
C13H13AO4iii 0.982.583.506(3)158

Symmetry codes: (i) ; (ii) ; (iii) .

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