Literature DB >> 26396829

Crystal structure of 5-chloro-2-(2-fluoro-phen-yl)-3-methyl-sulfinyl-1-benzo-furan.

Hong Dae Choi1, Uk Lee2.   

Abstract

In the title compound, C15H10ClFO2S, the dihedral angle between the mean planes of the benzo-furan ring [r.m.s. deviation = 0.007 (1) Å] and the 2-fluoro-phenyl ring is 32.53 (5)°. In the crystal, mol-ecules related by inversion are paired into dimers via two different C-H⋯O hydrogen bonds. Further, Cl⋯O halogen bonds [3.114 (1) Å], and F⋯π [F-to-furan-centroid distance = 3.109 (1) Å] and S⋯F [3.1984 (9) Å] inter-actions link these into a three-dimensional network.

Entities:  

Keywords:  2-fluoro­phen­yl; C—H⋯O hydrogen bonds; F⋯π and S⋯F contacts; benzo­furan; crystal structure

Year:  2015        PMID: 26396829      PMCID: PMC4571429          DOI: 10.1107/S2056989015013948

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For the pharmacological properties of benzo­furan compounds, see: Aslam et al. (2009 ▸); Galal et al. (2009 ▸); Howlett et al. (1999 ▸); Wahab Khan et al. (2005 ▸); Ono et al. (2002 ▸). For a related structure, see: Choi & Lee (2014 ▸). For further synthetic details, see: Choi et al. (1999 ▸). For a review of halogen bonding, see: Politzer et al. (2007 ▸).

Experimental

Crystal data

C15H10ClFO2S M = 308.74 Triclinic, a = 7.9626 (1) Å b = 8.3518 (1) Å c = 10.7127 (2) Å α = 92.758 (1)° β = 95.509 (1)° γ = 112.373 (1)° V = 652.97 (2) Å3 Z = 2 Mo Kα radiation μ = 0.46 mm−1 T = 173 K 0.45 × 0.36 × 0.32 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▸) T min = 0.690, T max = 0.746 12250 measured reflections 3263 independent reflections 3030 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.081 S = 1.05 3263 reflections 183 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.26 e Å−3

Data collection: APEX2 (Bruker, 2009 ▸); cell refinement: SAINT (Bruker, 2009 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015 ▸); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▸) and DIAMOND (Brandenburg, 1998 ▸); software used to prepare material for publication: SHELXL2014. Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989015013948/fy2120sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015013948/fy2120Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015013948/fy2120Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015013948/fy2120fig1.tif The mol­ecular structure of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are presented as small spheres of arbitrary radius. Click here for additional data file. x y z x y z x y z x y z x y z . DOI: 10.1107/S2056989015013948/fy2120fig2.tif A view of the C–H⋯O, Cl⋯O, F⋯π and S⋯F inter­actions (dotted lines) in the crystal structure of the title compound. H atoms not participating in hydrogen-bonding were omitted for clarity. [Symmetry codes: (i) − x + 2, − y + 1, − z; (ii) − x + 1, − y + 1, − z; (iii) − x + 1, − y + 1, − z + 1; (iv) − x, − y, − z; (v) − x + 1, − y, − z.] CCDC reference: 1414408 Additional supporting information: crystallographic information; 3D view; checkCIF report
C15H10ClFO2SZ = 2
Mr = 308.74F(000) = 316
Triclinic, P1Dx = 1.570 Mg m3
a = 7.9626 (1) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.3518 (1) ÅCell parameters from 6796 reflections
c = 10.7127 (2) Åθ = 2.7–28.4°
α = 92.758 (1)°µ = 0.46 mm1
β = 95.509 (1)°T = 173 K
γ = 112.373 (1)°Block, colourless
V = 652.97 (2) Å30.45 × 0.36 × 0.32 mm
Bruker SMART APEXII CCD diffractometer3263 independent reflections
Radiation source: rotating anode3030 reflections with I > 2σ(I)
Detector resolution: 10.0 pixels mm-1Rint = 0.023
φ and ω scansθmax = 28.4°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −10→10
Tmin = 0.690, Tmax = 0.746k = −11→11
12250 measured reflectionsl = −14→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030H-atom parameters constrained
wR(F2) = 0.081w = 1/[σ2(Fo2) + (0.0399P)2 + 0.2911P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
3263 reflectionsΔρmax = 0.34 e Å3
183 parametersΔρmin = −0.26 e Å3
0 restraintsExtinction correction: SHELXL2014 (Sheldrick, 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.042 (3)
Experimental. 1H NMR (δ p.p.m., CDCl3, 400 Hz): 8.21 (d, J = 2.04 Hz, 1H), 7.66-7.71 (m, 1H), 7.50-7.57 (m, 2H), 7.32-7.41 (m, 2H), 7.21-7.26 (m, 1H), 3.15 (s, 3H).
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
Cl10.80773 (5)0.60679 (5)0.52105 (3)0.03134 (11)
S10.20658 (4)0.19225 (4)0.10339 (3)0.02090 (10)
F10.22939 (12)−0.06448 (11)−0.07604 (8)0.0324 (2)
O10.70194 (12)0.36314 (12)−0.00857 (8)0.02229 (19)
O20.18502 (13)0.32691 (13)0.18956 (10)0.0283 (2)
C10.44206 (16)0.27158 (16)0.08330 (11)0.0198 (2)
C20.58981 (17)0.37914 (16)0.17693 (11)0.0198 (2)
C30.60633 (18)0.43369 (17)0.30452 (12)0.0220 (3)
H30.50320.40090.34980.026*
C40.77958 (18)0.53749 (17)0.36158 (12)0.0231 (3)
C50.93409 (18)0.58960 (18)0.29751 (13)0.0258 (3)
H51.05020.66200.34110.031*
C60.91896 (18)0.53654 (18)0.17133 (13)0.0255 (3)
H61.02200.57010.12600.031*
C70.74560 (17)0.43207 (16)0.11491 (12)0.0208 (2)
C80.51654 (17)0.26585 (16)−0.02553 (12)0.0201 (2)
C90.44641 (17)0.17903 (16)−0.15243 (12)0.0210 (2)
C100.30426 (18)0.01690 (17)−0.17542 (13)0.0242 (3)
C110.2375 (2)−0.06907 (19)−0.29337 (14)0.0304 (3)
H110.1390−0.1796−0.30490.036*
C120.3186 (2)0.0106 (2)−0.39495 (14)0.0341 (3)
H120.2744−0.0450−0.47780.041*
C130.4640 (2)0.1712 (2)−0.37641 (13)0.0311 (3)
H130.51980.2238−0.44660.037*
C140.52834 (19)0.25528 (17)−0.25675 (12)0.0244 (3)
H140.62820.3649−0.24510.029*
C150.2029 (2)0.02115 (19)0.20017 (15)0.0323 (3)
H15A0.29500.06970.27410.048*
H15B0.2302−0.06650.15160.048*
H15C0.0814−0.03300.22760.048*
U11U22U33U12U13U23
Cl10.02955 (19)0.0403 (2)0.02092 (16)0.01176 (15)−0.00124 (12)−0.00425 (13)
S10.01618 (16)0.02104 (16)0.02386 (16)0.00518 (12)0.00408 (11)0.00099 (11)
F10.0333 (5)0.0245 (4)0.0318 (4)0.0018 (3)0.0101 (4)0.0004 (3)
O10.0179 (4)0.0253 (4)0.0208 (4)0.0049 (4)0.0045 (3)0.0002 (3)
O20.0243 (5)0.0265 (5)0.0342 (5)0.0092 (4)0.0093 (4)−0.0024 (4)
C10.0168 (6)0.0198 (6)0.0214 (6)0.0054 (4)0.0033 (4)0.0016 (4)
C20.0176 (6)0.0194 (6)0.0223 (6)0.0068 (4)0.0031 (4)0.0021 (4)
C30.0211 (6)0.0247 (6)0.0212 (6)0.0095 (5)0.0042 (5)0.0024 (5)
C40.0245 (6)0.0250 (6)0.0199 (6)0.0102 (5)0.0007 (5)0.0000 (5)
C50.0191 (6)0.0268 (6)0.0270 (6)0.0054 (5)−0.0012 (5)−0.0009 (5)
C60.0185 (6)0.0280 (7)0.0274 (6)0.0056 (5)0.0054 (5)0.0017 (5)
C70.0200 (6)0.0216 (6)0.0201 (5)0.0069 (5)0.0041 (4)0.0014 (4)
C80.0174 (6)0.0188 (5)0.0232 (6)0.0057 (4)0.0032 (4)0.0022 (4)
C90.0213 (6)0.0221 (6)0.0213 (6)0.0104 (5)0.0028 (5)−0.0004 (4)
C100.0230 (6)0.0235 (6)0.0265 (6)0.0092 (5)0.0051 (5)0.0009 (5)
C110.0286 (7)0.0263 (7)0.0319 (7)0.0083 (6)−0.0015 (6)−0.0066 (5)
C120.0409 (9)0.0368 (8)0.0247 (7)0.0177 (7)−0.0020 (6)−0.0067 (6)
C130.0395 (8)0.0347 (7)0.0221 (6)0.0176 (6)0.0047 (6)0.0025 (5)
C140.0259 (6)0.0244 (6)0.0240 (6)0.0106 (5)0.0048 (5)0.0027 (5)
C150.0310 (7)0.0285 (7)0.0386 (8)0.0097 (6)0.0134 (6)0.0126 (6)
Cl1—C41.7425 (13)C6—C71.3800 (18)
S1—O21.4913 (10)C6—H60.9500
S1—C11.7739 (12)C8—C91.4618 (17)
S1—C151.7983 (14)C9—C101.3867 (18)
F1—C101.3542 (15)C9—C141.4043 (18)
O1—C71.3741 (15)C10—C111.3740 (19)
O1—C81.3762 (15)C11—C121.386 (2)
C1—C81.3647 (17)C11—H110.9500
C1—C21.4420 (17)C12—C131.388 (2)
C2—C71.3945 (17)C12—H120.9500
C2—C31.3976 (17)C13—C141.3830 (19)
C3—C41.3802 (18)C13—H130.9500
C3—H30.9500C14—H140.9500
C4—C51.3990 (19)C15—H15A0.9800
C5—C61.3815 (19)C15—H15B0.9800
C5—H50.9500C15—H15C0.9800
O2—S1—C1105.84 (6)C1—C8—C9135.10 (12)
O2—S1—C15105.10 (7)O1—C8—C9114.01 (10)
C1—S1—C1597.80 (6)C10—C9—C14117.07 (12)
C7—O1—C8106.59 (9)C10—C9—C8122.54 (12)
C8—C1—C2106.80 (11)C14—C9—C8120.32 (12)
C8—C1—S1127.53 (10)F1—C10—C11117.65 (12)
C2—C1—S1125.04 (9)F1—C10—C9118.49 (12)
C7—C2—C3119.16 (11)C11—C10—C9123.83 (13)
C7—C2—C1105.31 (11)C10—C11—C12117.90 (14)
C3—C2—C1135.52 (12)C10—C11—H11121.1
C4—C3—C2116.81 (12)C12—C11—H11121.0
C4—C3—H3121.6C11—C12—C13120.39 (13)
C2—C3—H3121.6C11—C12—H12119.8
C3—C4—C5123.12 (12)C13—C12—H12119.8
C3—C4—Cl1118.55 (10)C14—C13—C12120.60 (13)
C5—C4—Cl1118.33 (10)C14—C13—H13119.7
C6—C5—C4120.45 (12)C12—C13—H13119.7
C6—C5—H5119.8C13—C14—C9120.18 (13)
C4—C5—H5119.8C13—C14—H14119.9
C7—C6—C5116.19 (12)C9—C14—H14119.9
C7—C6—H6121.9S1—C15—H15A109.5
C5—C6—H6121.9S1—C15—H15B109.5
O1—C7—C6125.31 (11)H15A—C15—H15B109.5
O1—C7—C2110.42 (11)S1—C15—H15C109.5
C6—C7—C2124.26 (12)H15A—C15—H15C109.5
C1—C8—O1110.87 (11)H15B—C15—H15C109.5
O2—S1—C1—C8−138.17 (12)C1—C2—C7—C6−179.34 (12)
C15—S1—C1—C8113.63 (13)C2—C1—C8—O1−0.33 (14)
O2—S1—C1—C231.48 (12)S1—C1—C8—O1170.83 (9)
C15—S1—C1—C2−76.71 (12)C2—C1—C8—C9178.19 (13)
C8—C1—C2—C70.43 (14)S1—C1—C8—C9−10.6 (2)
S1—C1—C2—C7−171.01 (9)C7—O1—C8—C10.10 (14)
C8—C1—C2—C3−178.84 (14)C7—O1—C8—C9−178.76 (10)
S1—C1—C2—C39.7 (2)C1—C8—C9—C10−33.0 (2)
C7—C2—C3—C4−0.38 (18)O1—C8—C9—C10145.51 (12)
C1—C2—C3—C4178.82 (13)C1—C8—C9—C14150.06 (15)
C2—C3—C4—C50.61 (19)O1—C8—C9—C14−31.45 (17)
C2—C3—C4—Cl1−179.26 (9)C14—C9—C10—F1176.27 (11)
C3—C4—C5—C6−0.5 (2)C8—C9—C10—F1−0.78 (19)
Cl1—C4—C5—C6179.35 (11)C14—C9—C10—C11−1.8 (2)
C4—C5—C6—C70.2 (2)C8—C9—C10—C11−178.88 (13)
C8—O1—C7—C6179.14 (12)F1—C10—C11—C12−177.47 (13)
C8—O1—C7—C20.19 (14)C9—C10—C11—C120.6 (2)
C5—C6—C7—O1−178.76 (12)C10—C11—C12—C130.8 (2)
C5—C6—C7—C20.0 (2)C11—C12—C13—C14−1.0 (2)
C3—C2—C7—O1179.03 (11)C12—C13—C14—C9−0.2 (2)
C1—C2—C7—O1−0.39 (14)C10—C9—C14—C131.59 (19)
C3—C2—C7—C60.1 (2)C8—C9—C14—C13178.71 (12)
D—H···AD—HH···AD···AD—H···A
C6—H6···O1i0.952.533.4756 (16)176
C14—H14···O2ii0.952.443.3591 (17)163
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
C6H6O1i 0.952.533.4756(16)176
C14H14O2ii 0.952.443.3591(17)163

Symmetry codes: (i) ; (ii) .

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