Literature DB >> 26396825

Crystal structure of cafenstrole.

Gihaeng Kang1, Jineun Kim1, Hyunjin Park1, Tae Ho Kim1.   

Abstract

The title compound (systematic name: N,N-diethyl-3-mesitylsulfonyl-1H-1,2,4-triazole-1-carboxamide), C16H22N4O3S, is a triazole herbicide. The dihedral angle between the planes of the triazole and benzene ring planes is 88.14 (10)°. In the crystal, C-H⋯O hydrogen bonds and weak C-H⋯π inter-actions link adjacent mol-ecules, forming one-dimensional chains along the a axis.

Entities:  

Keywords:  cafenstrole; crystal structure; herbicide,; triazole

Year:  2015        PMID: 26396825      PMCID: PMC4571425          DOI: 10.1107/S2056989015013869

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For information on the herbicidal properties of the title compound, see: Takahashi et al. (2001 ▸). For related crystal structure, see: Ohkata et al. (2002 ▸).

Experimental

Crystal data

C16H22N4O3S M = 350.43 Monoclinic, a = 7.2800 (3) Å b = 8.0410 (4) Å c = 30.1792 (13) Å β = 95.290 (3)° V = 1759.12 (14) Å3 Z = 4 Mo Kα radiation μ = 0.21 mm−1 T = 173 K 0.36 × 0.30 × 0.02 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2013 ▸) T min = 0.929, T max = 0.996 11871 measured reflections 3385 independent reflections 2760 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.118 S = 1.12 3385 reflections 222 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.35 e Å−3

Data collection: APEX2 (Bruker, 2013 ▸); cell refinement: SAINT (Bruker, 2013 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2015 ▸); molecular graphics: DIAMOND (Brandenburg, 2010 ▸); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▸). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015013869/hg5453sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015013869/hg5453Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015013869/hg5453Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015013869/hg5453fig1.tif The asymmetric unit of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are shown as small spheres of arbitrary radius. Click here for additional data file. b . DOI: 10.1107/S2056989015013869/hg5453fig2.tif Crystal packing viewed along the b axis. The inter­molecular inter­actions are shown as dashed lines. CCDC reference: 1414616 Additional supporting information: crystallographic information; 3D view; checkCIF report
C16H22N4O3SDx = 1.323 Mg m3
Mr = 350.43Melting point: 390 K
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 7.2800 (3) ÅCell parameters from 3608 reflections
b = 8.0410 (4) Åθ = 2.6–25.8°
c = 30.1792 (13) ŵ = 0.21 mm1
β = 95.290 (3)°T = 173 K
V = 1759.12 (14) Å3Plate, colourless
Z = 40.36 × 0.30 × 0.02 mm
F(000) = 744
Bruker APEXII CCD diffractometer2760 reflections with I > 2σ(I)
φ and ω scansRint = 0.033
Absorption correction: multi-scan (SADABS; Bruker, 2013)θmax = 26.0°, θmin = 1.4°
Tmin = 0.929, Tmax = 0.996h = −8→7
11871 measured reflectionsk = −9→9
3385 independent reflectionsl = −37→37
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.051H-atom parameters constrained
wR(F2) = 0.118w = 1/[σ2(Fo2) + (0.0373P)2 + 1.5378P] where P = (Fo2 + 2Fc2)/3
S = 1.12(Δ/σ)max < 0.001
3385 reflectionsΔρmax = 0.32 e Å3
222 parametersΔρmin = −0.35 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
S10.41370 (9)0.41398 (9)0.10060 (2)0.03098 (19)
O10.3991 (3)0.2440 (2)0.08694 (6)0.0440 (5)
O20.5862 (2)0.4698 (3)0.12191 (6)0.0426 (5)
O3−0.0331 (3)0.6067 (3)0.24940 (6)0.0450 (5)
N10.0629 (3)0.4287 (3)0.12755 (6)0.0321 (5)
N20.2960 (3)0.4724 (3)0.18146 (6)0.0280 (5)
N30.1290 (3)0.4783 (3)0.19847 (6)0.0262 (5)
N40.2305 (3)0.4731 (3)0.27538 (6)0.0265 (5)
C10.3372 (3)0.5499 (3)0.05661 (7)0.0243 (5)
C20.2701 (3)0.4890 (3)0.01447 (7)0.0250 (5)
C30.2198 (3)0.6048 (3)−0.01847 (7)0.0262 (5)
H30.17600.5657−0.04720.031*
C40.2303 (3)0.7740 (3)−0.01148 (8)0.0275 (6)
C50.2917 (3)0.8308 (3)0.03064 (8)0.0293 (6)
H50.29640.94720.03600.035*
C60.3468 (3)0.7227 (3)0.06518 (7)0.0272 (6)
C70.2494 (4)0.3081 (3)0.00170 (8)0.0348 (6)
H7A0.19220.2994−0.02890.052*
H7B0.17130.25210.02190.052*
H7C0.37110.25520.00380.052*
C80.1789 (4)0.8928 (4)−0.04883 (8)0.0389 (7)
H8A0.29020.9482−0.05740.058*
H8B0.09310.9763−0.03910.058*
H8C0.11990.8317−0.07440.058*
C90.4143 (4)0.7991 (4)0.10936 (8)0.0456 (8)
H9A0.54620.77580.11590.068*
H9B0.34590.75140.13280.068*
H9C0.39470.91960.10810.068*
C100.2465 (3)0.4418 (3)0.13928 (7)0.0263 (5)
C11−0.0062 (3)0.4550 (3)0.16559 (8)0.0302 (6)
H11−0.13430.45730.16940.036*
C120.1025 (3)0.5235 (3)0.24394 (8)0.0293 (6)
C130.3683 (3)0.3424 (3)0.27089 (8)0.0253 (5)
H13A0.33670.28170.24270.030*
H13B0.36350.26210.29560.030*
C140.5623 (3)0.4096 (4)0.27125 (9)0.0364 (6)
H14A0.57310.47520.24430.055*
H14B0.64990.31690.27230.055*
H14C0.58960.48030.29750.055*
C150.2014 (4)0.5244 (4)0.32107 (8)0.0371 (7)
H15A0.15120.63890.32050.045*
H15B0.32140.52530.33940.045*
C160.0700 (4)0.4095 (5)0.34227 (9)0.0528 (9)
H16A−0.04980.40960.32450.079*
H16B0.05420.44800.37250.079*
H16C0.12040.29640.34350.079*
U11U22U33U12U13U23
S10.0289 (4)0.0379 (4)0.0261 (3)0.0080 (3)0.0024 (2)0.0056 (3)
O10.0604 (13)0.0328 (11)0.0394 (10)0.0158 (10)0.0082 (9)0.0063 (9)
O20.0237 (10)0.0704 (15)0.0327 (9)0.0075 (10)−0.0024 (7)0.0098 (10)
O30.0377 (11)0.0587 (14)0.0388 (10)0.0233 (10)0.0043 (8)0.0019 (10)
N10.0265 (11)0.0399 (14)0.0290 (10)−0.0012 (10)−0.0020 (9)0.0017 (10)
N20.0220 (11)0.0345 (12)0.0275 (10)0.0021 (9)0.0020 (8)0.0046 (10)
N30.0213 (11)0.0306 (12)0.0264 (10)0.0019 (9)0.0000 (8)0.0035 (9)
N40.0290 (11)0.0244 (11)0.0251 (10)0.0033 (9)−0.0031 (8)−0.0011 (9)
C10.0214 (12)0.0284 (13)0.0230 (11)0.0013 (11)0.0018 (9)0.0029 (11)
C20.0173 (12)0.0319 (14)0.0261 (11)−0.0003 (10)0.0037 (9)−0.0022 (11)
C30.0241 (12)0.0326 (14)0.0215 (11)0.0007 (11)0.0003 (9)−0.0030 (11)
C40.0233 (13)0.0316 (14)0.0276 (12)0.0018 (11)0.0026 (10)0.0034 (11)
C50.0321 (14)0.0252 (13)0.0309 (12)−0.0004 (11)0.0043 (11)−0.0005 (11)
C60.0272 (13)0.0318 (14)0.0226 (11)−0.0017 (11)0.0016 (10)−0.0004 (11)
C70.0390 (16)0.0295 (15)0.0353 (13)0.0013 (13)0.0002 (11)−0.0050 (12)
C80.0479 (17)0.0350 (16)0.0328 (13)0.0050 (14)−0.0023 (12)0.0057 (13)
C90.066 (2)0.0384 (17)0.0306 (14)−0.0064 (16)−0.0051 (13)−0.0052 (13)
C100.0267 (13)0.0270 (13)0.0246 (11)0.0018 (11)−0.0011 (10)0.0046 (11)
C110.0256 (13)0.0338 (15)0.0299 (12)0.0007 (11)−0.0034 (10)0.0067 (12)
C120.0253 (14)0.0319 (14)0.0306 (13)0.0029 (12)0.0022 (10)0.0014 (11)
C130.0276 (13)0.0210 (12)0.0265 (11)0.0040 (10)−0.0014 (10)0.0047 (10)
C140.0278 (14)0.0360 (15)0.0441 (15)−0.0003 (12)−0.0026 (11)0.0088 (13)
C150.0461 (17)0.0354 (15)0.0281 (13)0.0066 (13)−0.0057 (12)−0.0099 (12)
C160.0481 (18)0.083 (3)0.0285 (13)−0.0110 (18)0.0087 (13)−0.0122 (16)
S1—O11.429 (2)C6—C91.509 (3)
S1—O21.4293 (19)C7—H7A0.9800
S1—C11.769 (2)C7—H7B0.9800
S1—C101.777 (2)C7—H7C0.9800
O3—C121.216 (3)C8—H8A0.9800
N1—C111.313 (3)C8—H8B0.9800
N1—C101.355 (3)C8—H8C0.9800
N2—C101.314 (3)C9—H9A0.9800
N2—N31.364 (3)C9—H9B0.9800
N3—C111.345 (3)C9—H9C0.9800
N3—C121.450 (3)C11—H110.9500
N4—C121.331 (3)C13—C141.511 (3)
N4—C131.468 (3)C13—H13A0.9900
N4—C151.473 (3)C13—H13B0.9900
C1—C21.408 (3)C14—H14A0.9800
C1—C61.414 (4)C14—H14B0.9800
C2—C31.387 (3)C14—H14C0.9800
C2—C71.509 (3)C15—C161.513 (4)
C3—C41.378 (4)C15—H15A0.9900
C3—H30.9500C15—H15B0.9900
C4—C51.385 (3)C16—H16A0.9800
C4—C81.499 (3)C16—H16B0.9800
C5—C61.387 (3)C16—H16C0.9800
C5—H50.9500
O1—S1—O2118.01 (13)H8A—C8—H8C109.5
O1—S1—C1111.37 (11)H8B—C8—H8C109.5
O2—S1—C1110.25 (12)C6—C9—H9A109.5
O1—S1—C10105.83 (12)C6—C9—H9B109.5
O2—S1—C10106.94 (11)H9A—C9—H9B109.5
C1—S1—C10103.17 (11)C6—C9—H9C109.5
C11—N1—C10101.98 (19)H9A—C9—H9C109.5
C10—N2—N3101.33 (18)H9B—C9—H9C109.5
C11—N3—N2109.55 (19)N2—C10—N1116.4 (2)
C11—N3—C12125.5 (2)N2—C10—S1121.10 (18)
N2—N3—C12124.48 (19)N1—C10—S1122.51 (17)
C12—N4—C13126.3 (2)N1—C11—N3110.7 (2)
C12—N4—C15115.5 (2)N1—C11—H11124.6
C13—N4—C15116.46 (19)N3—C11—H11124.6
C2—C1—C6120.9 (2)O3—C12—N4126.5 (2)
C2—C1—S1121.47 (19)O3—C12—N3116.5 (2)
C6—C1—S1117.58 (17)N4—C12—N3116.9 (2)
C3—C2—C1117.4 (2)N4—C13—C14112.9 (2)
C3—C2—C7116.8 (2)N4—C13—H13A109.0
C1—C2—C7125.8 (2)C14—C13—H13A109.0
C4—C3—C2123.1 (2)N4—C13—H13B109.0
C4—C3—H3118.4C14—C13—H13B109.0
C2—C3—H3118.4H13A—C13—H13B107.8
C3—C4—C5118.3 (2)C13—C14—H14A109.5
C3—C4—C8120.5 (2)C13—C14—H14B109.5
C5—C4—C8121.1 (2)H14A—C14—H14B109.5
C4—C5—C6122.0 (2)C13—C14—H14C109.5
C4—C5—H5119.0H14A—C14—H14C109.5
C6—C5—H5119.0H14B—C14—H14C109.5
C5—C6—C1118.2 (2)N4—C15—C16112.1 (2)
C5—C6—C9117.2 (2)N4—C15—H15A109.2
C1—C6—C9124.6 (2)C16—C15—H15A109.2
C2—C7—H7A109.5N4—C15—H15B109.2
C2—C7—H7B109.5C16—C15—H15B109.2
H7A—C7—H7B109.5H15A—C15—H15B107.9
C2—C7—H7C109.5C15—C16—H16A109.5
H7A—C7—H7C109.5C15—C16—H16B109.5
H7B—C7—H7C109.5H16A—C16—H16B109.5
C4—C8—H8A109.5C15—C16—H16C109.5
C4—C8—H8B109.5H16A—C16—H16C109.5
H8A—C8—H8B109.5H16B—C16—H16C109.5
C4—C8—H8C109.5
C10—N2—N3—C11−1.4 (3)N3—N2—C10—S1−177.87 (17)
C10—N2—N3—C12−174.3 (2)C11—N1—C10—N20.7 (3)
O1—S1—C1—C20.7 (2)C11—N1—C10—S1178.95 (19)
O2—S1—C1—C2133.7 (2)O1—S1—C10—N2113.2 (2)
C10—S1—C1—C2−112.4 (2)O2—S1—C10—N2−13.4 (2)
O1—S1—C1—C6−178.97 (18)C1—S1—C10—N2−129.7 (2)
O2—S1—C1—C6−46.0 (2)O1—S1—C10—N1−65.0 (2)
C10—S1—C1—C667.9 (2)O2—S1—C10—N1168.3 (2)
C6—C1—C2—C32.1 (3)C1—S1—C10—N152.1 (2)
S1—C1—C2—C3−177.58 (17)C10—N1—C11—N3−1.5 (3)
C6—C1—C2—C7−178.5 (2)N2—N3—C11—N12.0 (3)
S1—C1—C2—C71.8 (3)C12—N3—C11—N1174.8 (2)
C1—C2—C3—C4−1.0 (4)C13—N4—C12—O3164.5 (3)
C7—C2—C3—C4179.6 (2)C15—N4—C12—O30.2 (4)
C2—C3—C4—C5−0.9 (4)C13—N4—C12—N3−17.0 (4)
C2—C3—C4—C8178.2 (2)C15—N4—C12—N3178.7 (2)
C3—C4—C5—C61.7 (4)C11—N3—C12—O3−29.9 (4)
C8—C4—C5—C6−177.4 (2)N2—N3—C12—O3141.9 (3)
C4—C5—C6—C1−0.6 (4)C11—N3—C12—N4151.5 (2)
C4—C5—C6—C9178.9 (2)N2—N3—C12—N4−36.8 (3)
C2—C1—C6—C5−1.3 (4)C12—N4—C13—C14110.4 (3)
S1—C1—C6—C5178.35 (18)C15—N4—C13—C14−85.5 (3)
C2—C1—C6—C9179.2 (2)C12—N4—C15—C1682.9 (3)
S1—C1—C6—C9−1.2 (3)C13—N4—C15—C16−83.0 (3)
N3—N2—C10—N10.4 (3)
D—H···AD—HH···AD···AD—H···A
C11—H11···O2i0.952.383.136 (3)136
C7—H7C···Cg1ii0.982.803.561 (3)135
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
C11H11O2i 0.952.383.136(3)136
C7H7C Cg1ii 0.982.803.561(3)135

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Very-long-chain fatty acid biosynthesis is inhibited by cafenstrole, N,N-diethyl-3-mesitylsulfonyl-1H-1,2,4-triazole-1-carboxamide and its analogs.

Authors:  H Takahashi; A Ohki; M Kanzaki; A Tanaka; Y Sato; B Matthes; P Böger; K Wakabayashi
Journal:  Z Naturforsch C J Biosci       Date:  2001 Sep-Oct

3.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

  3 in total

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