Literature DB >> 26396819

Crystal structure of 5-bromo-2,4,6-trimethyl-3-[(2-methyl-phen-yl)sulfin-yl]-1-benzo-furan.

Hong Dae Choi1, Uk Lee2.   

Abstract

In the title compound, C18H17BrO2S, the dihedral angle between the mean planes of the benzo-furan [r.m.s. deviation = 0.025 (2) Å] and the 2-methyl-benzene rings is 87.87 (5)°. In the crystal, mol-ecules are linked into supra-molecular layers parallel to (0-11) by C-H⋯O hydrogen bonds and Br⋯Br [3.4521 (5) Å] contacts. These are connected into a three-dimensional architecture via C-H⋯π inter-actions, which link inversion-related mol-ecules into dimers, and π-π inter-actions between the benzene and furan rings [centroid-centroid distance = 3.573 (2) Å].

Entities:  

Keywords:  Br⋯Br contacts; C—H⋯O hydrogen bonds; C—H⋯π inter­actions; benzo­furan; crystal structure; π–π inter­actions

Year:  2015        PMID: 26396819      PMCID: PMC4571419          DOI: 10.1107/S2056989015013687

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For the pharmacological properties of benzo­furan compounds, see: Aslam et al. (2009 ▸); Galal et al. (2009 ▸); Howlett et al. (1999 ▸); Wahab Khan et al. (2005 ▸); Ono et al. (2002 ▸). For a related structure, see: Choi et al. (2014 ▸). For synthetic details, see: Choi et al. (1999 ▸).

Experimental

Crystal data

C18H17BrO2S M = 377.29 Triclinic, a = 7.4011 (2) Å b = 10.6609 (2) Å c = 11.1857 (2) Å α = 67.265 (1)° β = 86.593 (1)° γ = 79.384 (1)° V = 800.00 (3) Å3 Z = 2 Mo Kα radiation μ = 2.70 mm−1 T = 173 K 0.60 × 0.54 × 0.48 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▸) T min = 0.269, T max = 0.746 14745 measured reflections 3982 independent reflections 3297 reflections with I > 2σ(I) R int = 0.046

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.087 S = 1.05 3982 reflections 204 parameters H-atom parameters constrained Δρmax = 0.48 e Å−3 Δρmin = −0.79 e Å−3

Data collection: APEX2 (Bruker, 2009 ▸); cell refinement: SAINT (Bruker, 2009 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015 ▸); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▸) and DIAMOND (Brandenburg,1998 ▸); software used to prepare material for publication: SHELXL2014. Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989015013687/tk5377sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015013687/tk5377Isup3.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015013687/tk5377Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015013687/tk5377fig1.tif The mol­ecular structure of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are presented as small spheres of arbitrary radius. Click here for additional data file. x y z x y z x y z . DOI: 10.1107/S2056989015013687/tk5377fig2.tif A view of the C—H⋯O and Br⋯Br inter­actions (dotted lines) in the crystal structure of the title compound. H atoms non-participating in hydrogen-bonding were omitted for clarity. [Symmetry codes: (i) x + 1, y, z; (iv) − x, − y + 2, − z + 1; (v) x − 1, y, z.] Click here for additional data file. x y z x y z . DOI: 10.1107/S2056989015013687/tk5377fig3.tif A view of the C—H⋯π and π–π inter­actions (dotted lines) in the crystal structure of the title compound. H atoms non-participating in hydrogen-bonding were omitted for clarity. [Symmetry codes: (ii) − x + 1, − y + 2, − z; (iii) − x + 1, − y + 1, − z + 1.] CCDC reference: 1413623 Additional supporting information: crystallographic information; 3D view; checkCIF report
C18H17BrO2SZ = 2
Mr = 377.29F(000) = 384
Triclinic, P1Dx = 1.566 Mg m3
a = 7.4011 (2) ÅMo Kα radiation, λ = 0.71073 Å
b = 10.6609 (2) ÅCell parameters from 7576 reflections
c = 11.1857 (2) Åθ = 2.8–28.3°
α = 67.265 (1)°µ = 2.70 mm1
β = 86.593 (1)°T = 173 K
γ = 79.384 (1)°Block, colourless
V = 800.00 (3) Å30.60 × 0.54 × 0.48 mm
Bruker SMART APEXII CCD diffractometer3982 independent reflections
Radiation source: rotating anode3297 reflections with I > 2σ(I)
Detector resolution: 10.0 pixels mm-1Rint = 0.046
φ and ω scansθmax = 28.4°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −9→9
Tmin = 0.269, Tmax = 0.746k = −14→14
14745 measured reflectionsl = −14→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035H-atom parameters constrained
wR(F2) = 0.087w = 1/[σ2(Fo2) + (0.0371P)2 + 0.3816P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
3982 reflectionsΔρmax = 0.48 e Å3
204 parametersΔρmin = −0.79 e Å3
0 restraintsExtinction correction: SHELXL2014 (Sheldrick 2014, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.040 (2)
Experimental. 1H NMR (δ p.p.m., CDCl3, 400 Hz): 8.01 (d, J = 7.52 Hz, 1H), 7.35-7.44 (m, 2H), 7.15-7.23 (m, 2H), 2.64 (s, 3H), 2.53 (s, 3H), 2.50 (s, 3H), 2.15 (s, 3H).
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
Br10.18479 (4)0.88031 (3)0.48841 (3)0.04996 (12)
S10.47494 (6)0.56515 (5)0.10695 (5)0.02289 (12)
O10.82901 (18)0.52534 (15)0.36828 (13)0.0255 (3)
O20.29324 (19)0.52076 (15)0.14556 (15)0.0318 (3)
C10.5830 (2)0.5705 (2)0.24007 (18)0.0215 (4)
C20.5307 (2)0.63609 (19)0.33233 (18)0.0212 (4)
C30.3713 (3)0.7126 (2)0.36069 (19)0.0252 (4)
C40.3916 (3)0.7625 (2)0.4560 (2)0.0305 (5)
C50.5531 (3)0.7344 (2)0.5293 (2)0.0320 (5)
C60.7045 (3)0.6511 (2)0.5047 (2)0.0292 (4)
H60.81510.62580.55380.035*
C70.6896 (3)0.6060 (2)0.40654 (18)0.0232 (4)
C80.7605 (3)0.5054 (2)0.26755 (19)0.0230 (4)
C90.1912 (3)0.7347 (2)0.2948 (2)0.0353 (5)
H9A0.09230.72540.35830.053*
H9B0.19510.66580.25640.053*
H9C0.16820.82750.22650.053*
C100.5626 (4)0.7902 (3)0.6331 (2)0.0456 (6)
H10A0.68260.75320.67710.068*
H10B0.46530.76240.69610.068*
H10C0.54600.89120.59360.068*
C110.8919 (3)0.4230 (2)0.2093 (2)0.0315 (5)
H11A0.83260.41740.13600.047*
H11B0.93030.32980.27450.047*
H11C0.99990.46740.17900.047*
C120.4240 (3)0.7459 (2)0.00352 (18)0.0237 (4)
C130.2409 (3)0.8030 (2)−0.0253 (2)0.0354 (5)
H130.14820.74980.01480.042*
C140.1930 (3)0.9375 (3)−0.1124 (3)0.0458 (6)
H140.06710.9775−0.13150.055*
C150.3276 (4)1.0137 (3)−0.1718 (2)0.0425 (6)
H150.29501.1065−0.23120.051*
C160.5101 (3)0.9544 (2)−0.1444 (2)0.0356 (5)
H160.60191.0078−0.18580.043*
C170.5636 (3)0.8195 (2)−0.05849 (19)0.0266 (4)
C180.7640 (3)0.7562 (3)−0.0369 (2)0.0373 (5)
H18A0.83620.8142−0.10520.056*
H18B0.78260.6637−0.03910.056*
H18C0.80370.74940.04780.056*
U11U22U33U12U13U23
Br10.05418 (19)0.03685 (17)0.05438 (19)0.00746 (11)0.01541 (12)−0.02160 (13)
S10.0205 (2)0.0245 (3)0.0253 (2)−0.00667 (18)−0.00178 (17)−0.0098 (2)
O10.0211 (7)0.0289 (8)0.0257 (7)−0.0014 (5)−0.0027 (5)−0.0104 (6)
O20.0237 (7)0.0313 (8)0.0385 (8)−0.0127 (6)−0.0026 (6)−0.0074 (7)
C10.0181 (8)0.0234 (10)0.0229 (9)−0.0051 (7)0.0006 (7)−0.0081 (8)
C20.0211 (9)0.0195 (9)0.0206 (9)−0.0045 (7)0.0020 (7)−0.0047 (7)
C30.0254 (9)0.0205 (10)0.0240 (10)−0.0038 (7)0.0041 (7)−0.0028 (8)
C40.0375 (11)0.0194 (10)0.0291 (11)−0.0006 (8)0.0082 (8)−0.0062 (8)
C50.0500 (13)0.0205 (10)0.0221 (10)−0.0050 (9)0.0016 (9)−0.0051 (8)
C60.0370 (11)0.0247 (11)0.0234 (10)−0.0047 (8)−0.0046 (8)−0.0059 (8)
C70.0245 (9)0.0200 (10)0.0220 (9)−0.0033 (7)0.0003 (7)−0.0047 (8)
C80.0208 (9)0.0244 (10)0.0241 (10)−0.0058 (7)0.0003 (7)−0.0089 (8)
C90.0229 (10)0.0347 (12)0.0435 (13)0.0015 (8)0.0022 (9)−0.0128 (10)
C100.0743 (18)0.0328 (13)0.0322 (13)−0.0039 (12)−0.0018 (12)−0.0173 (11)
C110.0218 (9)0.0345 (12)0.0386 (12)0.0011 (8)0.0011 (8)−0.0172 (10)
C120.0271 (9)0.0242 (10)0.0205 (9)−0.0055 (8)−0.0020 (7)−0.0086 (8)
C130.0252 (10)0.0353 (12)0.0372 (12)−0.0051 (9)−0.0058 (9)−0.0040 (10)
C140.0367 (13)0.0393 (14)0.0466 (15)0.0009 (10)−0.0116 (11)−0.0022 (11)
C150.0552 (15)0.0263 (12)0.0369 (13)−0.0047 (11)−0.0060 (11)−0.0022 (10)
C160.0467 (13)0.0309 (12)0.0300 (11)−0.0169 (10)0.0021 (9)−0.0082 (9)
C170.0299 (10)0.0317 (11)0.0232 (10)−0.0108 (8)0.0013 (8)−0.0136 (9)
C180.0287 (11)0.0438 (14)0.0376 (12)−0.0146 (10)0.0073 (9)−0.0110 (10)
Br1—C41.905 (2)C9—H9C0.9800
Br1—Br1i3.4521 (5)C10—H10A0.9800
S1—O21.4921 (14)C10—H10B0.9800
S1—C11.7561 (19)C10—H10C0.9800
S1—C121.805 (2)C11—H11A0.9800
O1—C81.366 (2)C11—H11B0.9800
O1—C71.376 (2)C11—H11C0.9800
C1—C81.360 (3)C12—C131.381 (3)
C1—C21.454 (3)C12—C171.399 (3)
C2—C71.395 (3)C13—C141.381 (3)
C2—C31.399 (3)C13—H130.9500
C3—C41.389 (3)C14—C151.377 (4)
C3—C91.498 (3)C14—H140.9500
C4—C51.409 (3)C15—C161.379 (4)
C5—C61.381 (3)C15—H150.9500
C5—C101.505 (3)C16—C171.384 (3)
C6—C71.375 (3)C16—H160.9500
C6—H60.9500C17—C181.504 (3)
C8—C111.481 (3)C18—H18A0.9800
C9—H9A0.9800C18—H18B0.9800
C9—H9B0.9800C18—H18C0.9800
C4—Br1—Br1i173.50 (6)C5—C10—H10B109.5
O2—S1—C1110.19 (9)H10A—C10—H10B109.5
O2—S1—C12105.80 (9)C5—C10—H10C109.5
C1—S1—C12101.64 (9)H10A—C10—H10C109.5
C8—O1—C7106.53 (14)H10B—C10—H10C109.5
C8—C1—C2106.98 (16)C8—C11—H11A109.5
C8—C1—S1117.93 (15)C8—C11—H11B109.5
C2—C1—S1135.02 (15)H11A—C11—H11B109.5
C7—C2—C3119.21 (18)C8—C11—H11C109.5
C7—C2—C1104.32 (16)H11A—C11—H11C109.5
C3—C2—C1136.46 (18)H11B—C11—H11C109.5
C4—C3—C2115.32 (18)C13—C12—C17121.35 (19)
C4—C3—C9122.90 (19)C13—C12—S1116.73 (15)
C2—C3—C9121.76 (19)C17—C12—S1121.36 (15)
C3—C4—C5125.3 (2)C14—C13—C12119.8 (2)
C3—C4—Br1117.17 (16)C14—C13—H13120.1
C5—C4—Br1117.52 (16)C12—C13—H13120.1
C6—C5—C4117.8 (2)C15—C14—C13120.0 (2)
C6—C5—C10120.1 (2)C15—C14—H14120.0
C4—C5—C10122.0 (2)C13—C14—H14120.0
C7—C6—C5117.64 (19)C14—C15—C16119.6 (2)
C7—C6—H6121.2C14—C15—H15120.2
C5—C6—H6121.2C16—C15—H15120.2
C6—C7—O1124.63 (17)C15—C16—C17122.1 (2)
C6—C7—C2124.46 (19)C15—C16—H16119.0
O1—C7—C2110.91 (16)C17—C16—H16119.0
C1—C8—O1111.23 (17)C16—C17—C12117.10 (19)
C1—C8—C11133.54 (19)C16—C17—C18120.40 (19)
O1—C8—C11115.20 (16)C12—C17—C18122.48 (19)
C3—C9—H9A109.5C17—C18—H18A109.5
C3—C9—H9B109.5C17—C18—H18B109.5
H9A—C9—H9B109.5H18A—C18—H18B109.5
C3—C9—H9C109.5C17—C18—H18C109.5
H9A—C9—H9C109.5H18A—C18—H18C109.5
H9B—C9—H9C109.5H18B—C18—H18C109.5
C5—C10—H10A109.5
O2—S1—C1—C8130.07 (16)C3—C2—C7—C6−2.7 (3)
C12—S1—C1—C8−118.10 (16)C1—C2—C7—C6178.32 (19)
O2—S1—C1—C2−53.3 (2)C3—C2—C7—O1177.36 (16)
C12—S1—C1—C258.6 (2)C1—C2—C7—O1−1.6 (2)
C8—C1—C2—C71.7 (2)C2—C1—C8—O1−1.1 (2)
S1—C1—C2—C7−175.25 (16)S1—C1—C8—O1176.39 (13)
C8—C1—C2—C3−177.1 (2)C2—C1—C8—C11−179.1 (2)
S1—C1—C2—C36.0 (4)S1—C1—C8—C11−1.6 (3)
C7—C2—C3—C45.3 (3)C7—O1—C8—C10.1 (2)
C1—C2—C3—C4−176.1 (2)C7—O1—C8—C11178.51 (17)
C7—C2—C3—C9−173.01 (18)O2—S1—C12—C13−3.79 (19)
C1—C2—C3—C95.6 (3)C1—S1—C12—C13−118.91 (17)
C2—C3—C4—C5−4.3 (3)O2—S1—C12—C17−175.31 (16)
C9—C3—C4—C5174.0 (2)C1—S1—C12—C1769.58 (17)
C2—C3—C4—Br1174.84 (13)C17—C12—C13—C14−3.1 (3)
C9—C3—C4—Br1−6.9 (3)S1—C12—C13—C14−174.6 (2)
C3—C4—C5—C60.3 (3)C12—C13—C14—C151.0 (4)
Br1—C4—C5—C6−178.87 (15)C13—C14—C15—C160.5 (4)
C3—C4—C5—C10−178.6 (2)C14—C15—C16—C170.0 (4)
Br1—C4—C5—C102.2 (3)C15—C16—C17—C12−2.0 (3)
C4—C5—C6—C72.7 (3)C15—C16—C17—C18176.6 (2)
C10—C5—C6—C7−178.4 (2)C13—C12—C17—C163.5 (3)
C5—C6—C7—O1178.41 (18)S1—C12—C17—C16174.66 (16)
C5—C6—C7—C2−1.5 (3)C13—C12—C17—C18−175.1 (2)
C8—O1—C7—C6−178.95 (19)S1—C12—C17—C18−3.9 (3)
C8—O1—C7—C21.0 (2)
D—H···AD—HH···AD···AD—H···A
C9—H9B···O20.982.333.274 (3)162
C11—H11C···O2ii0.982.323.276 (2)166
C15—H15···Cg1iii0.952.883.659 (3)140
Table 1

Hydrogen-bond geometry (, )

Cg1 is the centroid of the C2C7 benzene ring.

DHA DHHA D A DHA
C9H9BO20.982.333.274(3)162
C11H11CO2i 0.982.323.276(2)166
C15H15Cg1ii 0.952.883.659(3)140

Symmetry codes: (i) ; (ii) .

  7 in total

1.  A new structural alternative in benzo[b]furans for antimicrobial activity.

Authors:  M Wahab Khan; M Jahangir Alam; M A Rashid; R Chowdhury
Journal:  Bioorg Med Chem       Date:  2005-08-15       Impact factor: 3.641

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Benzofuran derivatives as Abeta-aggregate-specific imaging agents for Alzheimer's disease.

Authors:  Masahiro Ono; Mei-Ping Kung; Catherine Hou; Hank F Kung
Journal:  Nucl Med Biol       Date:  2002-08       Impact factor: 2.408

4.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

5.  Antibacterial and antifungal activity of cicerfuran and related 2-arylbenzofurans and stilbenes.

Authors:  Shazia N Aslam; Philip C Stevenson; Tetsuo Kokubun; David R Hall
Journal:  Microbiol Res       Date:  2007-04-05       Impact factor: 5.415

6.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

7.  5-Bromo-2,4,6-trimethyl-3-(4-methyl-phenyl-sulfin-yl)-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-03-05
  7 in total

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