Literature DB >> 26396784

Crystal structure of 3-amino-1-(4-hy-droxy-phen-yl)-1H-benzo[f]chromene-2-carbo-nitrile.

Mehmet Akkurt1, Peter N Horton2, Sabry H H Younes3, Shaaban K Mohamed4, Mustafa R Albayati5.   

Abstract

In the title compound, C20H14N2O2, the hy-droxy-benzene ring is almost perpendicular to the mean plane of the naphthalene ring system, making a dihedral angle of 85.56 (4)°. The 4H-pyran ring fused with the naphthalene ring system has a flattened boat conformation. In the crystal, O-H⋯N and N-H⋯O hydrogen bonds link the mol-ecules into a supra-molecular layer in the bc plane; N-H⋯π inter-actions also contribute to this arrangement. The layers are linked by weak by C-H⋯π and π-π [inter-centroid separation = 3.8713 (7) Å] inter-actions.

Entities:  

Keywords:  N—H⋯π(arene) inter­actions; amino­chromenes; crystal structure; hydrogen bonding

Year:  2015        PMID: 26396784      PMCID: PMC4571384          DOI: 10.1107/S2056989015012566

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For the biological activity of some heterocyclic derivatives containing the 4H-pyran unit, see: Elnagdi et al. (1983 ▸); Goldmann & Stoltefus (1991 ▸); Perez-Perez et al. (1995 ▸); Fan et al. (2010 ▸); Aytemir et al. (2004 ▸); Uher et al. (1994 ▸). For similar structures, see: Akkurt et al. (2013 ▸, 2015 ▸).

Experimental

Crystal data

C20H14N2O2 M = 314.33 Monoclinic, a = 12.1086 (8) Å b = 13.1418 (9) Å c = 10.1552 (7) Å β = 96.992 (1)° V = 1603.97 (19) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 100 K 0.21 × 0.08 × 0.07 mm

Data collection

Rigaku AFC12 (Right) diffractometer Absorption correction: multi-scan (CrystalClear-SM Expert; Rigaku, 2012 ▸) T min = 0.738, T max = 1.000 17411 measured reflections 3679 independent reflections 3251 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.092 S = 1.06 3679 reflections 229 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.26 e Å−3 Δρmin = −0.18 e Å−3

Data collection: CrystalClear-SM Expert (Rigaku, 2012 ▸); cell refinement: CrystalClear-SM Expert; data reduction: CrystalClear-SM Expert; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2012 (Sheldrick, 2015 ▸); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▸); software used to prepare material for publication: WinGX (Farrugia, 2012 ▸). Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989015012566/tk5372sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015012566/tk5372Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015012566/tk5372Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015012566/tk5372fig1.tif View of the title compound with the atom-numbering scheme. Displacement ellipsoids for non-H atoms are drawn at the 50% probability level. Click here for additional data file. a . DOI: 10.1107/S2056989015012566/tk5372fig2.tif View of the packing of the title compound viewing down a axis. CCDC reference: 1409621 Additional supporting information: crystallographic information; 3D view; checkCIF report
C20H14N2O2F(000) = 656
Mr = 314.33Dx = 1.302 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71075 Å
a = 12.1086 (8) ÅCell parameters from 17749 reflections
b = 13.1418 (9) Åθ = 2.3–27.5°
c = 10.1552 (7) ŵ = 0.09 mm1
β = 96.992 (1)°T = 100 K
V = 1603.97 (19) Å3Blade, colourless
Z = 40.21 × 0.08 × 0.07 mm
Rigaku AFC12 (Right) diffractometer3679 independent reflections
Radiation source: Rotating Anode3251 reflections with I > 2σ(I)
Detector resolution: 28.5714 pixels mm-1Rint = 0.030
profile data from ω–scansθmax = 27.5°, θmin = 2.9°
Absorption correction: multi-scan (CrystalClear-SM Expert; Rigaku, 2012)h = −15→15
Tmin = 0.738, Tmax = 1.000k = −17→14
17411 measured reflectionsl = −12→13
Refinement on F23 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.034H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.092w = 1/[σ2(Fo2) + (0.0425P)2 + 0.4007P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
3679 reflectionsΔρmax = 0.26 e Å3
229 parametersΔρmin = −0.18 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
C10.33983 (8)0.47639 (8)1.11802 (10)0.0237 (2)
C20.31777 (8)0.53512 (7)1.00751 (9)0.0225 (2)
C30.22804 (8)0.50920 (7)0.89492 (9)0.02158 (19)
H30.18650.57300.86720.026*
C40.14741 (8)0.43453 (7)0.94430 (10)0.0234 (2)
C50.04093 (8)0.41495 (8)0.87013 (10)0.0261 (2)
C60.00288 (9)0.46750 (8)0.75126 (11)0.0295 (2)
H60.04940.51700.71780.035*
C7−0.10048 (9)0.44795 (9)0.68361 (12)0.0356 (3)
H7−0.12500.48470.60490.043*
C8−0.17001 (9)0.37399 (10)0.73009 (13)0.0380 (3)
H8−0.24080.36030.68220.046*
C9−0.13586 (9)0.32188 (9)0.84389 (13)0.0363 (3)
H9−0.18360.27220.87470.044*
C10−0.03025 (9)0.34047 (8)0.91728 (11)0.0300 (2)
C110.00527 (9)0.28765 (9)1.03649 (12)0.0348 (3)
H11−0.04170.23741.06750.042*
C120.10573 (9)0.30770 (8)1.10727 (12)0.0325 (2)
H120.12870.27231.18750.039*
C130.17513 (8)0.38188 (8)1.05958 (10)0.0256 (2)
C140.38247 (9)0.62331 (8)0.99791 (10)0.0264 (2)
C150.27956 (8)0.46801 (7)0.77552 (9)0.02106 (19)
C160.32470 (8)0.37029 (7)0.77790 (10)0.0233 (2)
H160.32010.32800.85290.028*
C170.37626 (8)0.33360 (7)0.67264 (10)0.0237 (2)
H170.40670.26690.67580.028*
C180.38308 (8)0.39533 (8)0.56223 (9)0.0235 (2)
C190.33979 (9)0.49308 (8)0.55907 (10)0.0272 (2)
H190.34530.53570.48460.033*
C200.28830 (8)0.52852 (8)0.66516 (10)0.0255 (2)
H200.25850.59550.66220.031*
N10.42225 (8)0.48875 (8)1.21728 (9)0.0297 (2)
N20.43322 (9)0.69661 (8)0.99112 (10)0.0383 (2)
O10.27537 (6)0.39555 (6)1.14083 (7)0.02776 (17)
O20.43199 (7)0.36270 (6)0.45510 (7)0.02998 (18)
H1N0.4259 (12)0.4453 (10)1.2856 (13)0.042 (4)*
H2N0.4767 (11)0.5317 (10)1.2069 (14)0.041 (4)*
H2O0.4737 (13)0.3086 (11)0.4770 (16)0.057 (5)*
U11U22U33U12U13U23
C10.0230 (5)0.0260 (5)0.0232 (5)0.0009 (4)0.0073 (4)−0.0010 (4)
C20.0224 (5)0.0251 (5)0.0207 (4)−0.0014 (4)0.0050 (3)−0.0007 (4)
C30.0210 (4)0.0223 (4)0.0217 (4)0.0009 (3)0.0037 (3)0.0003 (3)
C40.0221 (5)0.0226 (5)0.0266 (5)0.0006 (4)0.0074 (4)−0.0028 (4)
C50.0226 (5)0.0257 (5)0.0312 (5)0.0012 (4)0.0080 (4)−0.0073 (4)
C60.0246 (5)0.0322 (5)0.0318 (5)0.0016 (4)0.0040 (4)−0.0067 (4)
C70.0281 (5)0.0410 (6)0.0370 (6)0.0051 (5)0.0009 (4)−0.0108 (5)
C80.0223 (5)0.0430 (7)0.0483 (7)0.0012 (5)0.0022 (5)−0.0184 (5)
C90.0251 (5)0.0330 (6)0.0529 (7)−0.0045 (4)0.0130 (5)−0.0159 (5)
C100.0249 (5)0.0266 (5)0.0405 (6)−0.0014 (4)0.0116 (4)−0.0089 (4)
C110.0317 (5)0.0279 (5)0.0477 (7)−0.0057 (4)0.0164 (5)−0.0007 (5)
C120.0338 (6)0.0287 (5)0.0370 (6)−0.0008 (4)0.0119 (5)0.0051 (4)
C130.0237 (5)0.0250 (5)0.0293 (5)0.0004 (4)0.0075 (4)−0.0004 (4)
C140.0277 (5)0.0328 (5)0.0189 (4)−0.0026 (4)0.0035 (4)0.0001 (4)
C150.0190 (4)0.0237 (5)0.0204 (4)−0.0002 (3)0.0020 (3)−0.0005 (3)
C160.0251 (5)0.0232 (5)0.0221 (4)−0.0006 (4)0.0046 (4)0.0033 (4)
C170.0251 (5)0.0206 (4)0.0258 (5)0.0017 (4)0.0045 (4)0.0009 (4)
C180.0224 (4)0.0285 (5)0.0196 (4)0.0012 (4)0.0032 (3)−0.0011 (4)
C190.0308 (5)0.0294 (5)0.0215 (5)0.0051 (4)0.0045 (4)0.0067 (4)
C200.0279 (5)0.0238 (5)0.0249 (5)0.0058 (4)0.0039 (4)0.0033 (4)
N10.0284 (5)0.0386 (5)0.0218 (4)−0.0026 (4)0.0020 (3)0.0042 (4)
N20.0448 (6)0.0404 (6)0.0292 (5)−0.0161 (5)0.0028 (4)0.0030 (4)
O10.0269 (4)0.0280 (4)0.0285 (4)−0.0009 (3)0.0036 (3)0.0063 (3)
O20.0364 (4)0.0326 (4)0.0223 (4)0.0095 (3)0.0091 (3)0.0022 (3)
C1—N11.3393 (13)C11—C121.3612 (17)
C1—O11.3548 (12)C11—H110.9500
C1—C21.3614 (14)C12—C131.4108 (14)
C2—C141.4089 (14)C12—H120.9500
C2—C31.5171 (13)C13—O11.3937 (12)
C3—C41.5122 (13)C14—N21.1492 (14)
C3—C151.5286 (13)C15—C201.3887 (13)
C3—H31.0000C15—C161.3948 (13)
C4—C131.3661 (14)C16—C171.3883 (13)
C4—C51.4351 (14)C16—H160.9500
C5—C61.4180 (15)C17—C181.3945 (13)
C5—C101.4250 (15)C17—H170.9500
C6—C71.3765 (15)C18—O21.3693 (11)
C6—H60.9500C18—C191.3864 (14)
C7—C81.4047 (18)C19—C201.3892 (14)
C7—H70.9500C19—H190.9500
C8—C91.3636 (19)C20—H200.9500
C8—H80.9500N1—H1N0.896 (12)
C9—C101.4207 (15)N1—H2N0.883 (12)
C9—H90.9500O2—H2O0.885 (13)
C10—C111.4162 (17)
N1—C1—O1111.01 (9)C12—C11—C10121.03 (10)
N1—C1—C2127.23 (10)C12—C11—H11119.5
O1—C1—C2121.75 (9)C10—C11—H11119.5
C1—C2—C14117.94 (9)C11—C12—C13118.93 (10)
C1—C2—C3122.99 (9)C11—C12—H12120.5
C14—C2—C3119.07 (8)C13—C12—H12120.5
C4—C3—C2109.14 (8)C4—C13—O1123.20 (9)
C4—C3—C15112.06 (8)C4—C13—C12123.35 (10)
C2—C3—C15110.69 (8)O1—C13—C12113.46 (9)
C4—C3—H3108.3N2—C14—C2178.35 (12)
C2—C3—H3108.3C20—C15—C16118.23 (9)
C15—C3—H3108.3C20—C15—C3121.06 (8)
C13—C4—C5118.06 (9)C16—C15—C3120.61 (8)
C13—C4—C3120.77 (9)C17—C16—C15121.23 (9)
C5—C4—C3121.16 (9)C17—C16—H16119.4
C6—C5—C10118.25 (10)C15—C16—H16119.4
C6—C5—C4122.52 (10)C16—C17—C18119.55 (9)
C10—C5—C4119.23 (10)C16—C17—H17120.2
C7—C6—C5121.03 (11)C18—C17—H17120.2
C7—C6—H6119.5O2—C18—C19118.08 (9)
C5—C6—H6119.5O2—C18—C17122.03 (9)
C6—C7—C8120.47 (12)C19—C18—C17119.90 (9)
C6—C7—H7119.8C18—C19—C20119.79 (9)
C8—C7—H7119.8C18—C19—H19120.1
C9—C8—C7120.00 (11)C20—C19—H19120.1
C9—C8—H8120.0C15—C20—C19121.29 (9)
C7—C8—H8120.0C15—C20—H20119.4
C8—C9—C10121.26 (11)C19—C20—H20119.4
C8—C9—H9119.4C1—N1—H1N117.9 (9)
C10—C9—H9119.4C1—N1—H2N119.1 (9)
C11—C10—C9121.63 (10)H1N—N1—H2N122.1 (13)
C11—C10—C5119.39 (10)C1—O1—C13118.57 (8)
C9—C10—C5118.98 (11)C18—O2—H2O109.9 (11)
N1—C1—C2—C14−4.87 (16)C9—C10—C11—C12−178.64 (10)
O1—C1—C2—C14173.97 (9)C5—C10—C11—C120.69 (16)
N1—C1—C2—C3174.55 (9)C10—C11—C12—C13−0.47 (17)
O1—C1—C2—C3−6.61 (15)C5—C4—C13—O1−179.02 (9)
C1—C2—C3—C418.81 (13)C3—C4—C13—O12.51 (15)
C14—C2—C3—C4−161.78 (9)C5—C4—C13—C121.68 (15)
C1—C2—C3—C15−104.97 (10)C3—C4—C13—C12−176.79 (9)
C14—C2—C3—C1574.44 (11)C11—C12—C13—C4−0.76 (16)
C2—C3—C4—C13−16.41 (12)C11—C12—C13—O1179.88 (9)
C15—C3—C4—C13106.56 (10)C4—C3—C15—C20134.98 (10)
C2—C3—C4—C5165.16 (8)C2—C3—C15—C20−102.93 (10)
C15—C3—C4—C5−71.87 (11)C4—C3—C15—C16−48.65 (12)
C13—C4—C5—C6178.20 (9)C2—C3—C15—C1673.44 (11)
C3—C4—C5—C6−3.33 (14)C20—C15—C16—C17−0.56 (14)
C13—C4—C5—C10−1.40 (14)C3—C15—C16—C17−177.04 (9)
C3—C4—C5—C10177.07 (9)C15—C16—C17—C18−0.08 (15)
C10—C5—C6—C70.61 (15)C16—C17—C18—O2−179.34 (9)
C4—C5—C6—C7−178.99 (10)C16—C17—C18—C190.85 (15)
C5—C6—C7—C8−1.03 (16)O2—C18—C19—C20179.21 (9)
C6—C7—C8—C90.84 (17)C17—C18—C19—C20−0.97 (16)
C7—C8—C9—C10−0.24 (17)C16—C15—C20—C190.45 (15)
C8—C9—C10—C11179.16 (10)C3—C15—C20—C19176.91 (9)
C8—C9—C10—C5−0.17 (16)C18—C19—C20—C150.31 (16)
C6—C5—C10—C11−179.35 (9)N1—C1—O1—C13169.17 (8)
C4—C5—C10—C110.26 (14)C2—C1—O1—C13−9.84 (14)
C6—C5—C10—C9−0.01 (14)C4—C13—O1—C112.00 (14)
C4—C5—C10—C9179.60 (9)C12—C13—O1—C1−168.63 (9)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O2i0.90 (1)2.03 (1)2.9191 (12)173 (1)
O2—H2O···N2ii0.89 (1)1.86 (1)2.7403 (12)175 (2)
N1—H2N···Cg4iii0.88 (1)2.55 (1)3.2340 (11)135 (1)
C11—H11···Cg3iv0.952.973.7610 (13)142
Table 1

Hydrogen-bond geometry (, )

Cg3 and Cg4 are the centroids of the C5C10 and C15C20 rings, respectively.

DHA DHHA D A DHA
N1H1NO2i 0.90(1)2.03(1)2.9191(12)173(1)
O2H2ON2ii 0.89(1)1.86(1)2.7403(12)175(2)
N1H2N Cg4iii 0.88(1)2.55(1)3.2340(11)135(1)
C11H11Cg3iv 0.952.973.7610(13)142

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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