| Literature DB >> 26396782 |
Dalena M Nguyen1, Vasumathi Desikan1, James A Golen2, David R Manke2.
Abstract
The title compound (systematic name: 2,6-dimethyl-1H-pyridin-4-one hemihydrate), C7H9NO·0.5H2O, has a single planar mol-ecule in the asymmetric unit with the non-H atoms possessing a mean deviation from planarity of 0.021 Å. There is also half of a water mol-ecule present in the asymmetric unit. In the crystal, infinite (001) sheets are formed by N-H⋯O and O-H⋯O hydrogen bonds.Entities:
Keywords: crystal structure; hydrogen bonding; pyridones
Year: 2015 PMID: 26396782 PMCID: PMC4571382 DOI: 10.1107/S2056989015012402
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C7H9NO·0.5H2O | |
| Orthorhombic, | Cu |
| Hall symbol: A 2 -2ac | Cell parameters from 9829 reflections |
| θ = 7.1–72.4° | |
| µ = 0.73 mm−1 | |
| NEEDLE, colourless | |
| 0.5 × 0.1 × 0.1 mm |
| Bruker Venture D8 CMOS diffractometer | 1366 independent reflections |
| Radiation source: microfocus Cu | 1352 reflections with |
| HELIOS MX monochromator | |
| φ and ω scans | θmax = 72.4°, θmin = 7.1° |
| Absorption correction: multi-scan ( | |
| 11786 measured reflections |
| Refinement on | Hydrogen site location: mixed |
| Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.15 e Å−3 | |
| 1366 reflections | Δρmin = −0.19 e Å−3 |
| 95 parameters | Absolute structure: Flack |
| 3 restraints | Absolute structure parameter: 0.05 (12) |
| Experimental. Absorption correction: SADABS-2014/4 (Bruker,2014) was used for absorption correction. wR2(int) was 0.1440 before and 0.0881 after correction. The Ratio of minimum to maximum transmission is 0.7350. The λ/2 correction factor is 0.00150. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| O1 | 0.47723 (9) | 0.33620 (8) | 0.49203 (19) | 0.0287 (3) | |
| O2 | 0.5000 | 0.5000 | 0.6889 (3) | 0.0399 (5) | |
| N1 | 0.16883 (11) | 0.24949 (11) | 0.4446 (2) | 0.0215 (3) | |
| C3 | 0.35308 (14) | 0.22232 (12) | 0.3962 (2) | 0.0234 (4) | |
| H3 | 0.4083 | 0.1841 | 0.3504 | 0.028* | |
| C2 | 0.24877 (14) | 0.19343 (12) | 0.3853 (2) | 0.0222 (4) | |
| C4 | 0.38007 (12) | 0.30864 (12) | 0.4748 (2) | 0.0226 (4) | |
| C7 | 0.09367 (14) | 0.39066 (13) | 0.5690 (3) | 0.0265 (4) | |
| H7A | 0.0630 | 0.4210 | 0.4669 | 0.040* | |
| H7B | 0.1158 | 0.4381 | 0.6527 | 0.040* | |
| H7C | 0.0399 | 0.3499 | 0.6218 | 0.040* | |
| C6 | 0.18900 (13) | 0.33399 (11) | 0.5164 (2) | 0.0217 (4) | |
| C1 | 0.21576 (15) | 0.10115 (12) | 0.3125 (3) | 0.0270 (4) | |
| H1A | 0.1736 | 0.0672 | 0.3988 | 0.040* | |
| H1B | 0.2797 | 0.0650 | 0.2828 | 0.040* | |
| H1C | 0.1724 | 0.1109 | 0.2085 | 0.040* | |
| C5 | 0.29237 (13) | 0.36395 (12) | 0.5339 (2) | 0.0229 (4) | |
| H5 | 0.3061 | 0.4226 | 0.5862 | 0.027* | |
| H2 | 0.4956 (19) | 0.4524 (12) | 0.621 (3) | 0.034* | |
| H1 | 0.1043 (9) | 0.2265 (14) | 0.444 (4) | 0.027* |
| O1 | 0.0205 (5) | 0.0250 (6) | 0.0405 (8) | −0.0007 (5) | −0.0004 (6) | −0.0028 (6) |
| O2 | 0.0553 (14) | 0.0318 (11) | 0.0324 (11) | −0.0147 (10) | 0.000 | 0.000 |
| N1 | 0.0206 (6) | 0.0206 (7) | 0.0234 (7) | −0.0014 (5) | 0.0004 (6) | 0.0008 (6) |
| C3 | 0.0240 (8) | 0.0215 (8) | 0.0246 (8) | 0.0035 (6) | 0.0014 (7) | 0.0012 (8) |
| C2 | 0.0268 (8) | 0.0193 (8) | 0.0205 (7) | 0.0009 (6) | −0.0014 (7) | 0.0022 (7) |
| C4 | 0.0229 (8) | 0.0208 (8) | 0.0241 (9) | 0.0003 (6) | −0.0011 (7) | 0.0038 (8) |
| C7 | 0.0245 (8) | 0.0243 (8) | 0.0309 (10) | 0.0025 (7) | −0.0008 (7) | −0.0041 (8) |
| C6 | 0.0244 (8) | 0.0196 (8) | 0.0213 (8) | 0.0009 (6) | −0.0012 (7) | 0.0019 (7) |
| C1 | 0.0309 (9) | 0.0216 (8) | 0.0284 (10) | −0.0005 (7) | −0.0007 (8) | −0.0012 (8) |
| C5 | 0.0255 (8) | 0.0174 (7) | 0.0258 (8) | −0.0004 (6) | −0.0006 (7) | 0.0004 (7) |
| O1—C4 | 1.283 (2) | C7—H7A | 0.9800 |
| O2—H2 | 0.862 (7) | C7—H7B | 0.9800 |
| N1—C2 | 1.362 (2) | C7—H7C | 0.9800 |
| N1—C6 | 1.359 (2) | C7—C6 | 1.498 (2) |
| N1—H1 | 0.871 (7) | C6—C5 | 1.367 (2) |
| C3—H3 | 0.9500 | C1—H1A | 0.9800 |
| C3—C2 | 1.370 (2) | C1—H1B | 0.9800 |
| C3—C4 | 1.422 (3) | C1—H1C | 0.9800 |
| C2—C1 | 1.498 (2) | C5—H5 | 0.9500 |
| C4—C5 | 1.428 (2) | ||
| C2—N1—H1 | 116.8 (15) | C6—C7—H7A | 109.5 |
| C6—N1—C2 | 122.02 (14) | C6—C7—H7B | 109.5 |
| C6—N1—H1 | 120.9 (16) | C6—C7—H7C | 109.5 |
| C2—C3—H3 | 119.5 | N1—C6—C7 | 116.70 (14) |
| C2—C3—C4 | 121.06 (16) | N1—C6—C5 | 119.79 (15) |
| C4—C3—H3 | 119.5 | C5—C6—C7 | 123.49 (16) |
| N1—C2—C3 | 119.80 (16) | C2—C1—H1A | 109.5 |
| N1—C2—C1 | 116.63 (15) | C2—C1—H1B | 109.5 |
| C3—C2—C1 | 123.57 (16) | C2—C1—H1C | 109.5 |
| O1—C4—C3 | 122.52 (15) | H1A—C1—H1B | 109.5 |
| O1—C4—C5 | 121.34 (16) | H1A—C1—H1C | 109.5 |
| C3—C4—C5 | 116.14 (15) | H1B—C1—H1C | 109.5 |
| H7A—C7—H7B | 109.5 | C4—C5—H5 | 119.4 |
| H7A—C7—H7C | 109.5 | C6—C5—C4 | 121.12 (16) |
| H7B—C7—H7C | 109.5 | C6—C5—H5 | 119.4 |
| O1—C4—C5—C6 | −179.53 (17) | C2—C3—C4—C5 | −2.6 (3) |
| N1—C6—C5—C4 | 1.2 (3) | C4—C3—C2—N1 | 2.5 (3) |
| C3—C4—C5—C6 | 0.7 (3) | C4—C3—C2—C1 | −176.66 (16) |
| C2—N1—C6—C7 | 177.28 (17) | C7—C6—C5—C4 | −177.33 (17) |
| C2—N1—C6—C5 | −1.4 (3) | C6—N1—C2—C3 | −0.5 (3) |
| C2—C3—C4—O1 | 177.66 (16) | C6—N1—C2—C1 | 178.74 (17) |
| H··· | ||||
| O2—H2···O1 | 0.86 (1) | 1.96 (1) | 2.8174 (17) | 173 (2) |
| N1—H1···O1i | 0.87 (1) | 1.86 (1) | 2.7154 (18) | 166 (3) |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| O2H2O1 | 0.86(1) | 1.96(1) | 2.8174(17) | 173(2) |
| N1H1O1i | 0.87(1) | 1.86(1) | 2.7154(18) | 166(3) |
Symmetry code: (i) .