Literature DB >> 26394399

Correction: Reproductive Mode and the Evolution of Genome Size and Structure in Caenorhabditis Nematodes.

Janna L Fierst, John H Willis, Cristel G Thomas, Wei Wang, Rose M Reynolds, Timothy E Ahearne, Asher D Cutter, Patrick C Phillips.   

Abstract

Entities:  

Year:  2015        PMID: 26394399      PMCID: PMC4578876          DOI: 10.1371/journal.pgen.1005497

Source DB:  PubMed          Journal:  PLoS Genet        ISSN: 1553-7390            Impact factor:   5.917


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One of the URLs in the Data Availability statement is incorrect. http://dx.doi.org/10.6084/m9.figshare.1396475 is incorrect. The correct URL is http://dx.doi.org/10.6084/m9.figshare.1449264. Additionally one of the species names is spelled incorrectly in the Materials and Methods section under the heading “Characterizing genome content”. It states C. brannier, whereas it should say C. brenneri. The corrected text is below. In order to compare genome content between nematode species we used our MAKER2 gene annotation pipeline to identify protein-coding genes in the Wormbase release WS244 genome sequences of C. briggsae, C. sinica, C. tropicalis, C. brenneri, C. elegans, C. japonica, C. angaria, and P. pacificus (S2 Table). We found that each custom characterization was within 3–5% of the currently annotated content, with the exception of C. brenneri for which we predicted a larger gene content. This is consistent with previous findings that >30% of C. elegans orthologous genes are found in two copies in the C. brenneri assembly [19]. We present the currently annotated content in Fig 1.
  1 in total

1.  Reproductive Mode and the Evolution of Genome Size and Structure in Caenorhabditis Nematodes.

Authors:  Janna L Fierst; John H Willis; Cristel G Thomas; Wei Wang; Rose M Reynolds; Timothy E Ahearne; Asher D Cutter; Patrick C Phillips
Journal:  PLoS Genet       Date:  2015-06-26       Impact factor: 5.917

  1 in total
  4 in total

1.  Fast genetic mapping of complex traits in C. elegans using millions of individuals in bulk.

Authors:  Alejandro Burga; Eyal Ben-David; Tzitziki Lemus Vergara; James Boocock; Leonid Kruglyak
Journal:  Nat Commun       Date:  2019-06-18       Impact factor: 14.919

2.  Transcriptomic analyses reveal groups of co-expressed, syntenic lncRNAs in four species of the genus Caenorhabditis.

Authors:  Cinta Pegueroles; Susana Iraola-Guzmán; Uciel Chorostecki; Ewa Ksiezopolska; Ester Saus; Toni Gabaldón
Journal:  RNA Biol       Date:  2019-01-31       Impact factor: 4.652

3.  Extensive non-redundancy in a recently duplicated developmental gene family.

Authors:  E A Baker; S P R Gilbert; S M Shimeld; A Woollard
Journal:  BMC Ecol Evol       Date:  2021-03-01

4.  Slow Recovery from Inbreeding Depression Generated by the Complex Genetic Architecture of Segregating Deleterious Mutations.

Authors:  Paula E Adams; Anna B Crist; Ellen M Young; John H Willis; Patrick C Phillips; Janna L Fierst
Journal:  Mol Biol Evol       Date:  2022-01-07       Impact factor: 8.800

  4 in total

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