| Literature DB >> 26392885 |
I Aytekin1, H Aksit2, A Sait3, F Kaya1, D Aksit4, M Gokmen5, A Unsal Baca3.
Abstract
INTRODUCTION: Bluetongue (BT) is a non-contagious infectious disease of ruminants. The disease agent bluetongue virus (BTV) is classified in the Reoviridae family Orbivirus. AIMS ANDEntities:
Keywords: Bluetongue; Ewes; PCR
Year: 2015 PMID: 26392885 PMCID: PMC4567142 DOI: 10.1136/vetreco-2014-000054
Source DB: PubMed Journal: Vet Rec Open ISSN: 2052-6113
Primer and probe sequences used for RT-PCR, sequencing and real-time RT-PCR assays for the detection of BTV
| Purpose | Oligo name | Sequence (5′–3′) | Location* | |
|---|---|---|---|---|
| BTV SEG1 RSA (east) | Forward primer BTVrsa | BTVrsa 291–311F | GCGTTCGAAGTTTACATCAAT | 291–311 |
| Reverse primer BTVrsa | BTVrsa 387–357R | CAGTCATCTCTCTAGACACTCTATAATTACG | 387–357 | |
| BTV SEG1 UNI (west) | Forward primer BTVuni | BTVuni 291–311F | GCTTTTGAGGTGTACGTGAAC | 291–311 |
| Reverse primer BTVuni | BTVuni 381–357R | TCTCCCTTGAAACTCTATAATTACG | 381–357 | |
| BTV SEG1 probes | Probe RSA | RSA-BTV 341–320 | CGGATCAAGTTCACTCCACGGT | 341–320 |
| Probe 323 | BTV 346–323 | TCCTCCGGATCAAGTTCACTCCAC | 346–323 | |
| RT-PCR+sequencing | Forward primer ORBI-UNI | ORBI-UNI-F | YMATCACCGTGCAAGGT | 19–35 |
| Reverse primer ORBI-UNI | ORBI-UNI-R | TGCATYTCGTTTTTMGC | 430–414 |
*Genome location according to GenBank accession number AY154458
BTV, bluetongue virus
Oxidant, antioxidant and biochemistry parameters in BT sheep and control group
| Parameters | Control group (n=10) | BT group (n=13) | P values |
|---|---|---|---|
| Ceruloplasmin (mg/dl) | 41.53±4.39 | 25.59±1.50 | ** |
| Total sialic acid (µg/ml) | 547.58±50.32 | 903.72±70.35 | ** |
| MDA (µmol/l) | 6.20±0.85 | 15.61±0.92 | *** |
| TAS (mmol Trolox Eq/l) | 0.57±0.01 | 0.48±0.01 | ** |
| Albumin (g/dl) | 2.29±0.04 | 2.16±0.06 | NS |
| ALT (U/l) | 18.10±0.86 | 22.70±1.36 | * |
| AST (U/l) | 89.80±4.32 | 114.81±10.53 | * |
| Cholesterol (mg/dl) | 63.80±2.40 | 71.36±5.05 | NS |
| Creatinine (mg/dl) | 0.73±0.02 | 0.64±0.04 | NS |
| GGT (U/l) | 50.60±4.28 | 45.63±3.46 | NS |
| Total protein (g/dl) | 6.72±0.23 | 6.34±0.24 | NS |
| Triglyceride (mg/dl) | 28.00±4.48 | 73.18±8.15 | *** |
*P<0.05; **P<0.01; ***P<0.001
BT, bluetongue; MDA, malondialdehyde; NS, not significant; TAS, antioxidative stress
FIG 1:Agarose gel electrophoresis of bluetongue virus (BTV) Seg1 gene based RT-PCR products amplified from field samples. Lane L: 100 bp DNA ladder; lane 1: positive control (+C); lane 2 field sample (Afyon 1): negative; lane 3, 4, 5, 6, 7, 8 field samples (Afyon 2, Afyon 3, Afyon 4, Afyon 5, Afyon 6, Afyon 7): positive
FIG 2:Agarose gel electrophoresis of bluetongue virus (BTV) Seg1 gene based RT-PCR products amplified from field samples. Lane L: 100 bp DNA ladder; lane 1: positive control (+C); lane 2, 3 field samples (Afyon 8, Afyon 9): negative; lane 4, 5, 6, 7 field samples (Afyon 10, Afyon 11, Afyon 12, Afyon 13): positive; lane 8: negative control (−C)