Literature DB >> 26391082

Structure of a PEGylated protein reveals a highly porous double-helical assembly.

Giada Cattani1, Lutz Vogeley2, Peter B Crowley1.   

Abstract

PEGylated proteins are a mainstay of the biopharmaceutical industry. Although the use of poly(ethylene glycol) (PEG) to increase particle size, stability and solubility is well-established, questions remain as to the structure of PEG-protein conjugates. Here we report the structural characterization of a model β-sheet protein (plastocyanin, 11.5 kDa) modified with a single PEG 5,000. An NMR spectroscopy study of the PEGylated conjugate indicated that the protein and PEG behaved as independent domains. A crystal structure revealed an extraordinary double-helical assembly of the conjugate, with the helices arranged orthogonally to yield a highly porous architecture. Electron density was not observed for the PEG chain, which indicates that it was disordered. The volume available per PEG chain in the crystal was within 10% of the calculated random coil volume. Together, these data support a minimal interaction between the protein and the synthetic polymer. Our work provides new possibilities for understanding this important class of protein-polymer hybrids and suggests a novel approach to engineering protein assemblies.

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Year:  2015        PMID: 26391082     DOI: 10.1038/nchem.2342

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  44 in total

Review 1.  Effect of pegylation on pharmaceuticals.

Authors:  J Milton Harris; Robert B Chess
Journal:  Nat Rev Drug Discov       Date:  2003-03       Impact factor: 84.694

2.  Understanding salt or PEG induced attractive interactions to crystallize biological macromolecules.

Authors:  Annette Tardieu; Françoise Bonneté; Stéphanie Finet; Denis Vivarès
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-26

3.  The conformation of the poly(ethylene glycol) chain in mono-PEGylated lysozyme and mono-PEGylated human growth hormone.

Authors:  Sheetal S Pai; Boualem Hammouda; Kunlun Hong; Danilo C Pozzo; Todd M Przybycien; Robert D Tilton
Journal:  Bioconjug Chem       Date:  2011-10-06       Impact factor: 4.774

4.  Modification of porous protein crystals in development of biohybrid materials.

Authors:  Tomomi Koshiyama; Naomi Kawaba; Tatsuo Hikage; Masanobu Shirai; Yuki Miura; Cheng-Yuan Huang; Koichiro Tanaka; Yoshihito Watanabe; Takafumi Ueno
Journal:  Bioconjug Chem       Date:  2010-02-17       Impact factor: 4.774

5.  A structured monodisperse PEG for the effective suppression of protein aggregation.

Authors:  Takahiro Muraoka; Kota Adachi; Mihoko Ui; Shunichi Kawasaki; Nabanita Sadhukhan; Haruki Obara; Hidehito Tochio; Masahiro Shirakawa; Kazushi Kinbara
Journal:  Angew Chem Int Ed Engl       Date:  2013-01-30       Impact factor: 15.336

6.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

7.  Hydrophobic forces, electrostatic steering, and acid-base bridging between atomically smooth self-assembled monolayers and end-functionalized PEGolated lipid bilayers.

Authors:  Markus Valtiner; Stephen H Donaldson; Matthew A Gebbie; Jacob N Israelachvili
Journal:  J Am Chem Soc       Date:  2012-01-11       Impact factor: 15.419

8.  NMR structure of two novel polyethylene glycol conjugates of the human growth hormone-releasing factor, hGRF(1-29)-NH2.

Authors:  Giuseppe Digilio; Luca Barbero; Chiara Bracco; Davide Corpillo; Pierandrea Esposito; Gilles Piquet; Silvio Traversa; Silvio Aime
Journal:  J Am Chem Soc       Date:  2003-03-26       Impact factor: 15.419

9.  Size comparison between proteins PEGylated with branched and linear poly(ethylene glycol) molecules.

Authors:  Conan J Fee
Journal:  Biotechnol Bioeng       Date:  2007-11-01       Impact factor: 4.530

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  14 in total

1.  The Surface of Protein λ6-85 Can Act as a Template for Recurring Poly(ethylene glycol) Structure.

Authors:  Shu-Han Chao; Jan Schäfer; Martin Gruebele
Journal:  Biochemistry       Date:  2017-10-06       Impact factor: 3.162

2.  DNA-Directed Protein Packing within Single Crystals.

Authors:  Peter H Winegar; Oliver G Hayes; Janet R McMillan; C Adrian Figg; Pamela J Focia; Chad A Mirkin
Journal:  Chem       Date:  2020-03-23       Impact factor: 22.804

Review 3.  How PEGylation influences protein conformational stability.

Authors:  Paul B Lawrence; Joshua L Price
Journal:  Curr Opin Chem Biol       Date:  2016-08-28       Impact factor: 8.822

4.  New molecular packing in a crystal of pseudoazurin from Alcaligenes faecalis: a double-helical arrangement of blue copper.

Authors:  Yohta Fukuda; Eiichi Mizohata; Tsuyoshi Inoue
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2017-02-28       Impact factor: 1.056

5.  Atomic-Scale View of Protein-PEG Interactions that Redirect the Thermal Unfolding Pathway of PEGylated Human Galectin-3.

Authors:  Amanda Pritzlaff; Guillaume Ferré; Emma Mulry; Ling Lin; Niloofar Gopal Pour; Daniel A Savin; Michael E Harris; Matthew T Eddy
Journal:  Angew Chem Int Ed Engl       Date:  2022-08-25       Impact factor: 16.823

6.  High Affinity Macrocycle Threading by a Near-Infrared Croconaine Dye with Flanking Polymer Chains.

Authors:  Wenqi Liu; Evan M Peck; Bradley D Smith
Journal:  J Phys Chem B       Date:  2016-02-02       Impact factor: 2.991

Review 7.  Integrative Approaches in Structural Biology: A More Complete Picture from the Combination of Individual Techniques.

Authors:  Linda Cerofolini; Marco Fragai; Enrico Ravera; Christoph A Diebolder; Ludovic Renault; Vito Calderone
Journal:  Biomolecules       Date:  2019-08-14

8.  Characterization of the Conjugation Pattern in Large Polysaccharide-Protein Conjugates by NMR Spectroscopy.

Authors:  Stefano Giuntini; Evita Balducci; Linda Cerofolini; Enrico Ravera; Marco Fragai; Francesco Berti; Claudio Luchinat
Journal:  Angew Chem Int Ed Engl       Date:  2017-10-19       Impact factor: 15.336

9.  Mapping protein-polymer conformations in bioconjugates with atomic precision.

Authors:  Kevin M Burridge; Ben A Shurina; Caleb T Kozuszek; Ryan F Parnell; Jonathan S Montgomery; Jamie L VanPelt; Nicholas M Daman; Robert M McCarrick; Theresa A Ramelot; Dominik Konkolewicz; Richard C Page
Journal:  Chem Sci       Date:  2020-06-03       Impact factor: 9.825

10.  Complexation of chiral amines by resorcin[4]arene sulfonic acids in polar media - circular dichroism and diffusion studies of chirality transfer and solvent dependence.

Authors:  Bartosz Setner; Agnieszka Szumna
Journal:  Beilstein J Org Chem       Date:  2019-08-12       Impact factor: 2.883

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