Literature DB >> 26390497

An Unsupervised Graph Based Continuous Word Representation Method for Biomedical Text Mining.

Zhenchao Jiang, Lishuang Li, Degen Huang.   

Abstract

In biomedical text mining tasks, distributed word representation has succeeded in capturing semantic regularities, but most of them are shallow-window based models, which are not sufficient for expressing the meaning of words. To represent words using deeper information, we make explicit the semantic regularity to emerge in word relations, including dependency relations and context relations, and propose a novel architecture for computing continuous vector representation by leveraging those relations. The performance of our model is measured on word analogy task and Protein-Protein Interaction Extraction (PPIE) task. Experimental results show that our method performs overall better than other word representation models on word analogy task and have many advantages on biomedical text mining.

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Year:  2015        PMID: 26390497     DOI: 10.1109/TCBB.2015.2478467

Source DB:  PubMed          Journal:  IEEE/ACM Trans Comput Biol Bioinform        ISSN: 1545-5963            Impact factor:   3.710


  2 in total

1.  SAO2Vec: Development of an algorithm for embedding the subject-action-object (SAO) structure using Doc2Vec.

Authors:  Sunhye Kim; Inchae Park; Byungun Yoon
Journal:  PLoS One       Date:  2020-02-05       Impact factor: 3.240

2.  Refining electronic medical records representation in manifold subspace.

Authors:  Bolin Wang; Yuanyuan Sun; Yonghe Chu; Di Zhao; Zhihao Yang; Jian Wang
Journal:  BMC Bioinformatics       Date:  2022-04-01       Impact factor: 3.169

  2 in total

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