Literature DB >> 26382231

Maximal dinucleotide and trinucleotide circular codes.

Christian J Michel1, Marco Pellegrini2, Giuseppe Pirillo3.   

Abstract

We determine here the number and the list of maximal dinucleotide and trinucleotide circular codes. We prove that there is no maximal dinucleotide circular code having strictly less than 6 elements (maximum size of dinucleotide circular codes). On the other hand, a computer calculus shows that there are maximal trinucleotide circular codes with less than 20 elements (maximum size of trinucleotide circular codes). More precisely, there are maximal trinucleotide circular codes with 14, 15, 16, 17, 18 and 19 elements and no maximal trinucleotide circular code having less than 14 elements. We give the same information for the maximal self-complementary dinucleotide and trinucleotide circular codes. The amino acid distribution of maximal trinucleotide circular codes is also determined.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Keywords:  Maximal dinucleotide circular code; Maximal self-complementary dinucleotide circular code; Maximal self-complementary trinucleotide circular code; Maximal trinucleotide circular code

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Year:  2015        PMID: 26382231     DOI: 10.1016/j.jtbi.2015.08.029

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  1 in total

1.  Pentamers with Non-redundant Frames: Bias for Natural Circular Code Codons.

Authors:  Jacques Demongeot; Hervé Seligmann
Journal:  J Mol Evol       Date:  2020-01-07       Impact factor: 2.395

  1 in total

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