Literature DB >> 26381222

Dereplication of natural products using minimal NMR data inputs.

Russell B Williams1, Mark O'Neil-Johnson, Antony J Williams, Patrick Wheeler, Rostislav Pol, Arvin Moser.   

Abstract

A strategy for the dereplication of a complete or a partial structure using (1)H NMR, (1)H-(13)C HSQC and (1)H-(1)H COSY spectral data, a molecular formula composition range and structural fragments against a massive database of about 22 million compounds is considered. As the increasing availability of public online databases containing natural products continues to grow the potential of utilizing these resources for dereplication purposes increases. This work examines approaches for NMR dereplication of natural products and includes a comparison with approaches for molecular formula and mass-based dereplication. The strategy is an application of computer-assisted structure elucidation using ACD/Structure Elucidator and data obtained from the ChemSpider database hosted by the Royal Society of Chemistry.

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Year:  2015        PMID: 26381222     DOI: 10.1039/c5ob01713k

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  5 in total

1.  Application of a computer-assisted structure elucidation program for the structural determination of a new terpenoid aldehyde with an unusual skeleton.

Authors:  Xing-Nuo Li; Clark D Ridge; Eugene P Mazzola; Jianghao Sun; Osvaldo Gutierrez; Arvin Moser; Joseph C DiMartino; Scott A MacDonald; Pei Chen
Journal:  Magn Reson Chem       Date:  2016-07-10       Impact factor: 2.447

Review 2.  Synergy and antagonism in natural product extracts: when 1 + 1 does not equal 2.

Authors:  Lindsay K Caesar; Nadja B Cech
Journal:  Nat Prod Rep       Date:  2019-06-19       Impact factor: 13.423

Review 3.  Current and Future Perspectives on the Structural Identification of Small Molecules in Biological Systems.

Authors:  Daniel A Dias; Oliver A H Jones; David J Beale; Berin A Boughton; Devin Benheim; Konstantinos A Kouremenos; Jean-Luc Wolfender; David S Wishart
Journal:  Metabolites       Date:  2016-12-15

4.  SistematX, an Online Web-Based Cheminformatics Tool for Data Management of Secondary Metabolites.

Authors:  Marcus Tullius Scotti; Chonny Herrera-Acevedo; Tiago Branquinho Oliveira; Renan Paiva Oliveira Costa; Silas Yudi Konno de Oliveira Santos; Ricardo Pereira Rodrigues; Luciana Scotti; Fernando Batista Da-Costa
Journal:  Molecules       Date:  2018-01-03       Impact factor: 4.411

Review 5.  Systematic Review of Chemical Constituents in the Genus Lycium (Solanaceae).

Authors:  Dan Qian; Yaxing Zhao; Guang Yang; Luqi Huang
Journal:  Molecules       Date:  2017-06-08       Impact factor: 4.411

  5 in total

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